RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 SAPCD1Q5SSQ6 148 aa12.16□□□□□ -0.46
NDEL1-209ENST00000580738 TRBV6-8A0A0A6YYG3 113 aa12.15□□□□□ -0.46
NDEL1-209ENST00000580738 ARMS2P0C7Q2 107 aa12.15□□□□□ -0.46
NDEL1-209ENST00000580738 RPL19P84098 196 aaKnown RBP12.15□□□□□ -0.46
NDEL1-209ENST00000580738 PPP1R1CQ8WVI7 109 aa12.15□□□□□ -0.46
NDEL1-209ENST00000580738 SFRP2Q96HF1 295 aa12.15□□□□□ -0.46
NDEL1-209ENST00000580738 TRBV7-3A0A075B6L6 115 aa12.14□□□□□ -0.47
NDEL1-209ENST00000580738 TRAV34A0A0B4J273 112 aa12.14□□□□□ -0.47
NDEL1-209ENST00000580738 FABP5P3A8MUU1 101 aa12.14□□□□□ -0.47
NDEL1-209ENST00000580738 B4DEV8 164 aa12.14□□□□□ -0.47
NDEL1-209ENST00000580738 RPL36AP83881 106 aaKnown RBP12.14□□□□□ -0.47
NDEL1-209ENST00000580738 KRTAP26-1Q6PEX3 210 aa12.14□□□□□ -0.47
NDEL1-209ENST00000580738 OR11H4Q8NGC9 324 aa12.14□□□□□ -0.47
NDEL1-209ENST00000580738 RPL36ALQ969Q0 106 aaKnown RBP12.14□□□□□ -0.47
NDEL1-209ENST00000580738 TRBV10-1A0A0K0K1A3 114 aa12.13□□□□□ -0.47
NDEL1-209ENST00000580738 GRIFINA4D1Z8 144 aa12.13□□□□□ -0.47
NDEL1-209ENST00000580738 STAG3L2P0CL84 134 aa12.13□□□□□ -0.47
NDEL1-209ENST00000580738 STAG3L3P0CL85 134 aa12.13□□□□□ -0.47
NDEL1-209ENST00000580738 RPL12P30050 165 aaKnown RBP12.13□□□□□ -0.47
NDEL1-209ENST00000580738 H2BFSP57053 126 aa12.13□□□□□ -0.47
NDEL1-209ENST00000580738 CYCSP99999 105 aaKnown RBP12.13□□□□□ -0.47
NDEL1-209ENST00000580738 MIAQ16674 131 aa12.13□□□□□ -0.47
NDEL1-209ENST00000580738 HSD17B11Q8NBQ5 300 aa12.13□□□□□ -0.47
NDEL1-209ENST00000580738 SUN5Q8TC36 379 aa12.13□□□□□ -0.47
NDEL1-209ENST00000580738 DPH3Q96FX2 82 aa12.13□□□□□ -0.47
NDEL1-209ENST00000580738 DPH3P1Q9H4G8 78 aa12.13□□□□□ -0.47
NDEL1-209ENST00000580738 M0R036 132 aa12.12□□□□□ -0.47
NDEL1-209ENST00000580738 GCHFRP30047 84 aa12.12□□□□□ -0.47
NDEL1-209ENST00000580738 CDC34P49427 236 aaPredicted RBP12.12□□□□□ -0.47
NDEL1-209ENST00000580738 CLPSL2Q6UWE3 100 aa12.12□□□□□ -0.47
NDEL1-209ENST00000580738 LINC01600Q96MT4 127 aa12.12□□□□□ -0.47
NDEL1-209ENST00000580738 ARL2-SNX15V9GYD0 113 aa12.12□□□□□ -0.47
NDEL1-209ENST00000580738 A0A087WYN8 130 aa12.11□□□□□ -0.47
NDEL1-209ENST00000580738 KRBOX1C9JBD0 128 aa12.11□□□□□ -0.47
NDEL1-209ENST00000580738 M0R381 172 aa12.11□□□□□ -0.47
NDEL1-209ENST00000580738 CHTF8P0CG12 524 aa12.11□□□□□ -0.47
NDEL1-209ENST00000580738 CRIP1P50238 77 aa12.11□□□□□ -0.47
NDEL1-209ENST00000580738 DNLZQ5SXM8 178 aa12.11□□□□□ -0.47
NDEL1-209ENST00000580738 RAB24Q969Q5 203 aa12.11□□□□□ -0.47
NDEL1-209ENST00000580738 MPC2O95563 127 aa12.1□□□□□ -0.47
NDEL1-209ENST00000580738 PTTG1O95997 202 aa12.1□□□□□ -0.47
NDEL1-209ENST00000580738 CHCHD5Q9BSY4 110 aa12.1□□□□□ -0.47
NDEL1-209ENST00000580738 PHOX2AO14813 284 aa12.09□□□□□ -0.47
NDEL1-209ENST00000580738 OR10G8Q8NGN5 311 aa12.09□□□□□ -0.47
NDEL1-209ENST00000580738 PRR34Q9NV39 138 aa12.09□□□□□ -0.47
NDEL1-209ENST00000580738 PHLDA3Q9Y5J5 127 aa12.09□□□□□ -0.47
NDEL1-209ENST00000580738 GAS8-AS1O95177 125 aa12.08□□□□□ -0.48
NDEL1-209ENST00000580738 CNBPP62633 177 aaKnown RBP12.08□□□□□ -0.48
NDEL1-209ENST00000580738 LINC00269Q8N2A0 174 aa12.08□□□□□ -0.48
NDEL1-209ENST00000580738 CLRN3Q8NCR9 226 aa12.08□□□□□ -0.48
NDEL1-209ENST00000580738 MZT2BQ6NZ67 158 aa12.07□□□□□ -0.48
NDEL1-209ENST00000580738 NEXN-AS1Q8NBZ9 246 aa12.07□□□□□ -0.48
NDEL1-209ENST00000580738 SPACA4Q8TDM5 124 aa12.07□□□□□ -0.48
NDEL1-209ENST00000580738 TMSB15BA0A087X1C1 80 aa12.06□□□□□ -0.48
NDEL1-209ENST00000580738 hDV102S1A0JD36 115 aa12.06□□□□□ -0.48
NDEL1-209ENST00000580738 SH2D1AO60880 128 aa12.06□□□□□ -0.48
NDEL1-209ENST00000580738 SLPIP03973 132 aa12.06□□□□□ -0.48
NDEL1-209ENST00000580738 TPT1P13693 172 aaKnown RBP12.06□□□□□ -0.48
NDEL1-209ENST00000580738 RBX1P62877 108 aa12.06□□□□□ -0.48
NDEL1-209ENST00000580738 NTM-AS1Q6ZSK4 140 aa12.06□□□□□ -0.48
NDEL1-209ENST00000580738 RNF185Q96GF1 192 aa12.06□□□□□ -0.48
NDEL1-209ENST00000580738 CCDC32Q9BV29 185 aa12.06□□□□□ -0.48
NDEL1-209ENST00000580738 IGLV10-54A0A075B6I4 117 aa12.05□□□□□ -0.48
NDEL1-209ENST00000580738 IGHV3-64A0A075B6Q5 118 aa12.05□□□□□ -0.48
NDEL1-209ENST00000580738 PET100P0DJ07 73 aa12.05□□□□□ -0.48
NDEL1-209ENST00000580738 Q86TA4 180 aa12.05□□□□□ -0.48
NDEL1-209ENST00000580738 TMEM167BQ9NRX6 74 aa12.05□□□□□ -0.48
NDEL1-209ENST00000580738 KIF25-AS1Q9Y6Z4 181 aa12.05□□□□□ -0.48
NDEL1-209ENST00000580738 GAGE6Q13070 117 aa12.04□□□□□ -0.48
NDEL1-209ENST00000580738 ZFP82Q8N141 532 aa12.04□□□□□ -0.48
NDEL1-209ENST00000580738 PLAC8Q9NZF1 115 aa12.04□□□□□ -0.48
NDEL1-209ENST00000580738 CXorf1O96002 111 aa12.03□□□□□ -0.48
NDEL1-209ENST00000580738 KRTAP10-8P60410 259 aa12.03□□□□□ -0.48
NDEL1-209ENST00000580738 RAB4BP61018 213 aa12.03□□□□□ -0.48
NDEL1-209ENST00000580738 PKIAP61925 76 aa12.03□□□□□ -0.48
NDEL1-209ENST00000580738 PRR27Q6MZM9 219 aa12.03□□□□□ -0.48
NDEL1-209ENST00000580738 C7orf33Q8WU49 177 aa12.03□□□□□ -0.48
NDEL1-209ENST00000580738 A0A0J9YXV3 536 aa12.02□□□□□ -0.49
NDEL1-209ENST00000580738 A0A1W2PRE2 83 aa12.02□□□□□ -0.49
NDEL1-209ENST00000580738 IFNA7P01567 189 aa12.02□□□□□ -0.49
NDEL1-209ENST00000580738 ZNF56Q15929 161 aa12.02□□□□□ -0.49
NDEL1-209ENST00000580738 PEX7O00628 323 aa12.01□□□□□ -0.49
NDEL1-209ENST00000580738 FAM162BQ5T6X4 162 aa12.01□□□□□ -0.49
NDEL1-209ENST00000580738 ENKURQ8TC29 256 aa12.01□□□□□ -0.49
NDEL1-209ENST00000580738 TRAV16A0A0A6YYK6 109 aaPredicted RBP12□□□□□ -0.49
NDEL1-209ENST00000580738 PRR3P79522 188 aaKnown RBP12□□□□□ -0.49
NDEL1-209ENST00000580738 REG3AQ06141 175 aa12□□□□□ -0.49
NDEL1-209ENST00000580738 LINC01559Q495D7 138 aa12□□□□□ -0.49
NDEL1-209ENST00000580738 WDR73Q6P4I2 378 aa12□□□□□ -0.49
NDEL1-209ENST00000580738 COX8CQ7Z4L0 72 aa12□□□□□ -0.49
NDEL1-209ENST00000580738 GTSF1Q8WW33 167 aa12□□□□□ -0.49
NDEL1-209ENST00000580738 ATP6V0CP27449 155 aa11.99□□□□□ -0.49
NDEL1-209ENST00000580738 UBE2G2P60604 165 aa11.99□□□□□ -0.49
NDEL1-209ENST00000580738 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.99□□□□□ -0.49
NDEL1-209ENST00000580738 PSMG3Q9BT73 122 aaPredicted RBP11.99□□□□□ -0.49
NDEL1-209ENST00000580738 DERL1Q9BUN8 251 aa11.99□□□□□ -0.49
NDEL1-209ENST00000580738 AP5S1Q9NUS5 200 aa11.99□□□□□ -0.49
NDEL1-209ENST00000580738 INMT-MINDY4F8WBC2 141 aa11.98□□□□□ -0.49
NDEL1-209ENST00000580738 RAB5CP51148 216 aa11.98□□□□□ -0.49
NDEL1-209ENST00000580738 ZNF674Q2M3X9 581 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms