RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 C19orf71A6NCJ1 209 aa2.52□□□□□ -2.01
CDH19-204ENST00000579658 HIGD1CA8MV81 97 aa2.52□□□□□ -2.01
CDH19-204ENST00000579658 PEX7O00628 323 aa2.52□□□□□ -2.01
CDH19-204ENST00000579658 CTSGP08311 255 aa2.52□□□□□ -2.01
CDH19-204ENST00000579658 TFPI2P48307 235 aa2.52□□□□□ -2.01
CDH19-204ENST00000579658 SUB1P53999 127 aaKnown RBP eCLIP2.52□□□□□ -2.01
CDH19-204ENST00000579658 FOXA3P55318 350 aaPredicted RBP2.52□□□□□ -2.01
CDH19-204ENST00000579658 TCL1AP56279 114 aa2.52□□□□□ -2.01
CDH19-204ENST00000579658 UBE2L3P68036 154 aaKnown RBP2.52□□□□□ -2.01
CDH19-204ENST00000579658 PSG3Q16557 428 aa2.52□□□□□ -2.01
CDH19-204ENST00000579658 C10orf113Q5VZT2 155 aa2.52□□□□□ -2.01
CDH19-204ENST00000579658 Q6ZN92 141 aa2.52□□□□□ -2.01
CDH19-204ENST00000579658 MAPKAPK5-AS1Q8N8E1 139 aa2.52□□□□□ -2.01
CDH19-204ENST00000579658 OR2D3Q8NGH3 330 aa2.52□□□□□ -2.01
CDH19-204ENST00000579658 KIR2DL5BQ8NHK3 375 aa2.52□□□□□ -2.01
CDH19-204ENST00000579658 PTH2Q96A98 100 aa2.52□□□□□ -2.01
CDH19-204ENST00000579658 RNF183Q96D59 192 aa2.52□□□□□ -2.01
CDH19-204ENST00000579658 URB1-AS1Q96HZ7 61 aa2.52□□□□□ -2.01
CDH19-204ENST00000579658 USMG5Q96IX5 58 aa2.52□□□□□ -2.01
CDH19-204ENST00000579658 GPR82Q96P67 336 aa2.52□□□□□ -2.01
CDH19-204ENST00000579658 NDFIP1Q9BT67 221 aa2.52□□□□□ -2.01
CDH19-204ENST00000579658 Q9H8V8 135 aa2.52□□□□□ -2.01
CDH19-204ENST00000579658 DKK2Q9UBU2 259 aa2.52□□□□□ -2.01
CDH19-204ENST00000579658 SMPXQ9UHP9 88 aa2.52□□□□□ -2.01
CDH19-204ENST00000579658 UFC1Q9Y3C8 167 aa2.52□□□□□ -2.01
CDH19-204ENST00000579658 IGHV3OR16-13A0A075B7E8 117 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 IGHV3-49A0A0A0MS15 119 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 IGHV3-74A0A0B4J1X5 117 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 A8MWL6 223 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 NPIPB6E9PJ23 425 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 K7EP13 123 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 CCL25O15444 150 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 HSBP1O75506 76 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 LTAP01374 205 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 PYYP10082 97 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 HNRNPA3P51991 378 aaKnown RBP2.51□□□□□ -2.01
CDH19-204ENST00000579658 C4orf26Q17RF5 130 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 Q56UQ5 140 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 TMEM190Q8WZ59 177 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 EEF1AKMT3Q96AZ1 226 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 CHCHD1Q96BP2 118 aaKnown RBP2.51□□□□□ -2.01
CDH19-204ENST00000579658 TRGV9Q99603 122 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 VPS25Q9BRG1 176 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 C21orf62Q9NYP8 219 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 ZNF492Q9P255 531 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 COX11Q9Y6N1 276 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 M0R2Z0 102 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 COX7A2P2O60397 106 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 APOHP02749 345 aaPredicted RBP2.51□□□□□ -2.01
CDH19-204ENST00000579658 OR5AL1P0C617 328 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 NTF3P20783 257 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 UBE2G1P62253 170 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 HBBP68871 147 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 BATFQ16520 125 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 LINC00305Q7Z4B0 112 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 ZNF738Q8NE65 137 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 FMC1Q96HJ9 113 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 TMEM70Q9BUB7 260 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 ST20Q9HBF5 79 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 V9GYY9 64 aa2.51□□□□□ -2.01
CDH19-204ENST00000579658 TRBV7-1A0A0A6YYK4 115 aa2.5□□□□□ -2.01
CDH19-204ENST00000579658 IGHV3-66A0A0C4DH42 116 aa2.5□□□□□ -2.01
CDH19-204ENST00000579658 TRBV6-1A0A0K0K1D8 114 aa2.5□□□□□ -2.01
CDH19-204ENST00000579658 TMEM213A2RRL7 107 aa2.5□□□□□ -2.01
CDH19-204ENST00000579658 PGPA6NDG6 321 aa2.5□□□□□ -2.01
CDH19-204ENST00000579658 CORTO00230 105 aa2.5□□□□□ -2.01
CDH19-204ENST00000579658 IGKV1-17P01599 117 aa2.5□□□□□ -2.01
CDH19-204ENST00000579658 RPS20P60866 119 aaKnown RBP2.5□□□□□ -2.01
CDH19-204ENST00000579658 LGALS9BQ3B8N2 356 aa2.5□□□□□ -2.01
CDH19-204ENST00000579658 SPATA12Q7Z6I5 190 aa2.5□□□□□ -2.01
CDH19-204ENST00000579658 C5orf17Q8NAS9 161 aa2.5□□□□□ -2.01
CDH19-204ENST00000579658 GATD1Q8NB37 220 aa2.5□□□□□ -2.01
CDH19-204ENST00000579658 GTSF1Q8WW33 167 aa2.5□□□□□ -2.01
CDH19-204ENST00000579658 LINC00477Q96M19 166 aa2.5□□□□□ -2.01
CDH19-204ENST00000579658 NAA38Q9BRA0 125 aaKnown RBP2.5□□□□□ -2.01
CDH19-204ENST00000579658 RPP21Q9H633 154 aaKnown RBP2.5□□□□□ -2.01
CDH19-204ENST00000579658 PKIGQ9Y2B9 76 aa2.5□□□□□ -2.01
CDH19-204ENST00000579658 OR4C46A6NHA9 309 aa2.5□□□□□ -2.01
CDH19-204ENST00000579658 SYS1-DBNDD2H3BUS1 97 aa2.5□□□□□ -2.01
CDH19-204ENST00000579658 GNG7O60262 68 aa2.5□□□□□ -2.01
CDH19-204ENST00000579658 IGLV2-11P01706 119 aa2.5□□□□□ -2.01
CDH19-204ENST00000579658 PPBPP02775 128 aa2.5□□□□□ -2.01
CDH19-204ENST00000579658 TCRAP04437 139 aa2.5□□□□□ -2.01
CDH19-204ENST00000579658 SLC25A5P05141 298 aaKnown RBP2.5□□□□□ -2.01
CDH19-204ENST00000579658 IGLC1P0CG04 106 aa2.5□□□□□ -2.01
CDH19-204ENST00000579658 RPL35AP18077 110 aaKnown RBP2.5□□□□□ -2.01
CDH19-204ENST00000579658 HINT1P49773 126 aaPredicted RBP2.5□□□□□ -2.01
CDH19-204ENST00000579658 PAPPA-AS1Q5QFB9 102 aa2.5□□□□□ -2.01
CDH19-204ENST00000579658 LEMD1Q68G75 181 aa2.5□□□□□ -2.01
CDH19-204ENST00000579658 GPHB5Q86YW7 130 aa2.5□□□□□ -2.01
CDH19-204ENST00000579658 ATOH7Q8N100 152 aa2.5□□□□□ -2.01
CDH19-204ENST00000579658 PHLDA1Q8WV24 401 aaPredicted RBP2.5□□□□□ -2.01
CDH19-204ENST00000579658 MS4A6AQ9H2W1 248 aa2.5□□□□□ -2.01
CDH19-204ENST00000579658 TMEM14CQ9P0S9 112 aa2.5□□□□□ -2.01
CDH19-204ENST00000579658 DYNC1H1Q14204 4646 aaKnown RBP2.5□□□□□ -2.01
CDH19-204ENST00000579658 FRAS1Q86XX4 4008 aa2.49□□□□□ -2.01
CDH19-204ENST00000579658 DNAH11Q96DT5 4516 aa2.49□□□□□ -2.01
CDH19-204ENST00000579658 TRAV30A0A087WSZ9 112 aa2.49□□□□□ -2.01
CDH19-204ENST00000579658 IGHV1-24A0A0C4DH33 117 aa2.49□□□□□ -2.01
CDH19-204ENST00000579658 SMIM9A6NGZ8 99 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms