RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 ZFP2Q6ZN57 461 aa6.15□□□□□ -1.42
CDK5RAP3-211ENST00000578996 C14orf178Q8N769 122 aaPredicted RBP6.15□□□□□ -1.42
CDK5RAP3-211ENST00000578996 ZC2HC1AQ96GY0 325 aa6.15□□□□□ -1.42
CDK5RAP3-211ENST00000578996 TM2D2Q9BX73 214 aa6.15□□□□□ -1.42
CDK5RAP3-211ENST00000578996 NKX6-2Q9C056 277 aaPredicted RBP6.15□□□□□ -1.42
CDK5RAP3-211ENST00000578996 MAP1LC3BQ9GZQ8 125 aa6.15□□□□□ -1.42
CDK5RAP3-211ENST00000578996 CYTL1Q9NRR1 136 aa6.15□□□□□ -1.42
CDK5RAP3-211ENST00000578996 MED9Q9NWA0 146 aa6.15□□□□□ -1.42
CDK5RAP3-211ENST00000578996 IL36BQ9NZH7 164 aa6.15□□□□□ -1.42
CDK5RAP3-211ENST00000578996 A0A087WWL8 130 aa6.14□□□□□ -1.43
CDK5RAP3-211ENST00000578996 LINC00862A6NCI5 91 aa6.14□□□□□ -1.43
CDK5RAP3-211ENST00000578996 KRBOX1C9JBD0 128 aa6.14□□□□□ -1.43
CDK5RAP3-211ENST00000578996 FAM229AH3BQW9 127 aa6.14□□□□□ -1.43
CDK5RAP3-211ENST00000578996 M0R381 172 aa6.14□□□□□ -1.43
CDK5RAP3-211ENST00000578996 TPT1P13693 172 aaKnown RBP6.14□□□□□ -1.43
CDK5RAP3-211ENST00000578996 CRIP1P50238 77 aa6.14□□□□□ -1.43
CDK5RAP3-211ENST00000578996 RAB14P61106 215 aa6.14□□□□□ -1.43
CDK5RAP3-211ENST00000578996 LAGE3Q14657 143 aa6.14□□□□□ -1.43
CDK5RAP3-211ENST00000578996 FAM162BQ5T6X4 162 aa6.14□□□□□ -1.43
CDK5RAP3-211ENST00000578996 EIF5AL1Q6IS14 154 aaKnown RBP6.14□□□□□ -1.43
CDK5RAP3-211ENST00000578996 DAZ4Q86SG3 579 aaKnown RBP6.14□□□□□ -1.43
CDK5RAP3-211ENST00000578996 FMC1Q96HJ9 113 aa6.14□□□□□ -1.43
CDK5RAP3-211ENST00000578996 DAZ3Q9NR90 486 aaKnown RBP6.14□□□□□ -1.43
CDK5RAP3-211ENST00000578996 Q9UF83 564 aa6.14□□□□□ -1.43
CDK5RAP3-211ENST00000578996 PHLDA3Q9Y5J5 127 aa6.14□□□□□ -1.43
CDK5RAP3-211ENST00000578996 URGCP-MRPS24S4R325 110 aa6.14□□□□□ -1.43
CDK5RAP3-211ENST00000578996 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.13□□□□□ -1.43
CDK5RAP3-211ENST00000578996 A0A1B0GV50 99 aa6.13□□□□□ -1.43
CDK5RAP3-211ENST00000578996 RHODO00212 210 aa6.13□□□□□ -1.43
CDK5RAP3-211ENST00000578996 AKR1C3P42330 323 aa6.13□□□□□ -1.43
CDK5RAP3-211ENST00000578996 TOR2AQ5JU69 321 aa6.13□□□□□ -1.43
CDK5RAP3-211ENST00000578996 PIK3CD-AS1Q5SR53 167 aa6.13□□□□□ -1.43
CDK5RAP3-211ENST00000578996 UFSP1Q6NVU6 142 aa6.13□□□□□ -1.43
CDK5RAP3-211ENST00000578996 TMEM70Q9BUB7 260 aa6.13□□□□□ -1.43
CDK5RAP3-211ENST00000578996 ZNF471Q9BX82 626 aaPredicted RBP6.13□□□□□ -1.43
CDK5RAP3-211ENST00000578996 ZFP30Q9Y2G7 519 aa6.13□□□□□ -1.43
CDK5RAP3-211ENST00000578996 A0A087WWC5 75 aa6.12□□□□□ -1.43
CDK5RAP3-211ENST00000578996 TRAV8-3A0A0A6YYJ7 113 aa6.12□□□□□ -1.43
CDK5RAP3-211ENST00000578996 ATP6V1G1O75348 118 aa6.12□□□□□ -1.43
CDK5RAP3-211ENST00000578996 LINC00694P0DN24 101 aa6.12□□□□□ -1.43
CDK5RAP3-211ENST00000578996 S100A1P23297 94 aa6.12□□□□□ -1.43
CDK5RAP3-211ENST00000578996 FHITP49789 147 aa6.12□□□□□ -1.43
CDK5RAP3-211ENST00000578996 WFDC2Q14508 124 aa6.12□□□□□ -1.43
CDK5RAP3-211ENST00000578996 KCNIP4Q6PIL6 250 aa6.12□□□□□ -1.43
CDK5RAP3-211ENST00000578996 IGKV2D-24A0A075B6R9 120 aa6.11□□□□□ -1.43
CDK5RAP3-211ENST00000578996 PAGE4O60829 102 aa6.11□□□□□ -1.43
CDK5RAP3-211ENST00000578996 LTAP01374 205 aa6.11□□□□□ -1.43
CDK5RAP3-211ENST00000578996 SEC11BP0C7V7 166 aa6.11□□□□□ -1.43
CDK5RAP3-211ENST00000578996 ZNF674Q2M3X9 581 aa6.11□□□□□ -1.43
CDK5RAP3-211ENST00000578996 LINC01559Q495D7 138 aa6.11□□□□□ -1.43
CDK5RAP3-211ENST00000578996 DNLZQ5SXM8 178 aa6.11□□□□□ -1.43
CDK5RAP3-211ENST00000578996 ZFP82Q8N141 532 aa6.11□□□□□ -1.43
CDK5RAP3-211ENST00000578996 FAM213BQ8TBF2 198 aa6.11□□□□□ -1.43
CDK5RAP3-211ENST00000578996 BAALCQ8WXS3 180 aa6.11□□□□□ -1.43
CDK5RAP3-211ENST00000578996 SFRP2Q96HF1 295 aa6.11□□□□□ -1.43
CDK5RAP3-211ENST00000578996 FAM30AQ9NZY2 134 aa6.11□□□□□ -1.43
CDK5RAP3-211ENST00000578996 KLK12Q9UKR0 248 aa6.11□□□□□ -1.43
CDK5RAP3-211ENST00000578996 A0A087WX48 190 aa6.1□□□□□ -1.43
CDK5RAP3-211ENST00000578996 RAB5CP51148 216 aa6.1□□□□□ -1.43
CDK5RAP3-211ENST00000578996 SSTP61278 116 aa6.1□□□□□ -1.43
CDK5RAP3-211ENST00000578996 RPL36AP83881 106 aaKnown RBP6.1□□□□□ -1.43
CDK5RAP3-211ENST00000578996 ZNF56Q15929 161 aa6.1□□□□□ -1.43
CDK5RAP3-211ENST00000578996 PRR27Q6MZM9 219 aa6.1□□□□□ -1.43
CDK5RAP3-211ENST00000578996 ALKAL2Q6UX46 152 aa6.1□□□□□ -1.43
CDK5RAP3-211ENST00000578996 COX8CQ7Z4L0 72 aa6.1□□□□□ -1.43
CDK5RAP3-211ENST00000578996 NIT1Q86X76 327 aa6.1□□□□□ -1.43
CDK5RAP3-211ENST00000578996 SFT2D1Q8WV19 159 aa6.1□□□□□ -1.43
CDK5RAP3-211ENST00000578996 RPL36ALQ969Q0 106 aaKnown RBP6.1□□□□□ -1.43
CDK5RAP3-211ENST00000578996 UBE2WQ96B02 151 aa6.1□□□□□ -1.43
CDK5RAP3-211ENST00000578996 RMI2Q96E14 147 aa6.1□□□□□ -1.43
CDK5RAP3-211ENST00000578996 DNAJC30Q96LL9 226 aa6.1□□□□□ -1.43
CDK5RAP3-211ENST00000578996 TCEAL7Q9BRU2 100 aa6.1□□□□□ -1.43
CDK5RAP3-211ENST00000578996 TRBV6-1A0A0K0K1D8 114 aa6.09□□□□□ -1.43
CDK5RAP3-211ENST00000578996 SCO2A0A1W2PP80 73 aa6.09□□□□□ -1.43
CDK5RAP3-211ENST00000578996 RBFOX3A6NFN3 312 aa6.09□□□□□ -1.43
CDK5RAP3-211ENST00000578996 TMEM262E9PQX1 116 aa6.09□□□□□ -1.43
CDK5RAP3-211ENST00000578996 SULT1A2P50226 295 aa6.09□□□□□ -1.43
CDK5RAP3-211ENST00000578996 RPL19P84098 196 aaKnown RBP6.09□□□□□ -1.43
CDK5RAP3-211ENST00000578996 LINC01620Q4KN68 170 aa6.09□□□□□ -1.43
CDK5RAP3-211ENST00000578996 COX11Q9Y6N1 276 aa6.09□□□□□ -1.43
CDK5RAP3-211ENST00000578996 VPS13BQ7Z7G8 4022 aa6.09□□□□□ -1.43
CDK5RAP3-211ENST00000578996 HERC1Q15751 4861 aa6.09□□□□□ -1.44
CDK5RAP3-211ENST00000578996 DNAH8Q96JB1 4490 aa6.08□□□□□ -1.44
CDK5RAP3-211ENST00000578996 TRBV7-3A0A075B6L6 115 aa6.08□□□□□ -1.44
CDK5RAP3-211ENST00000578996 MUC21A0A0G2JKD1 596 aa6.08□□□□□ -1.44
CDK5RAP3-211ENST00000578996 TRBV10-1A0A0K0K1A3 114 aa6.08□□□□□ -1.44
CDK5RAP3-211ENST00000578996 MUC21A0A140T8X8 626 aa6.08□□□□□ -1.44
CDK5RAP3-211ENST00000578996 UMAD1C9J7I0 102 aa6.08□□□□□ -1.44
CDK5RAP3-211ENST00000578996 ELOBQ15370 118 aa6.08□□□□□ -1.44
CDK5RAP3-211ENST00000578996 SPANXN1Q5VSR9 72 aa6.08□□□□□ -1.44
CDK5RAP3-211ENST00000578996 SLC7A5P1Q8MH63 180 aa6.08□□□□□ -1.44
CDK5RAP3-211ENST00000578996 OR10AG1Q8NH19 301 aa6.08□□□□□ -1.44
CDK5RAP3-211ENST00000578996 F5H697 171 aa6.07□□□□□ -1.44
CDK5RAP3-211ENST00000578996 CRPP02741 224 aa6.07□□□□□ -1.44
CDK5RAP3-211ENST00000578996 S100A9P06702 114 aaKnown RBP6.07□□□□□ -1.44
CDK5RAP3-211ENST00000578996 UBE2D3P61077 147 aa6.07□□□□□ -1.44
CDK5RAP3-211ENST00000578996 UBE2D2P62837 147 aa6.07□□□□□ -1.44
CDK5RAP3-211ENST00000578996 BLOC1S1P78537 153 aa6.07□□□□□ -1.44
CDK5RAP3-211ENST00000578996 BAGE2Q86Y30 109 aa6.07□□□□□ -1.44
CDK5RAP3-211ENST00000578996 LINC00528Q8N1L1 170 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms