RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 GNRH2O43555 120 aa7.41□□□□□ -1.22
SS18-210ENST00000578700 ZNF324O75467 553 aaPredicted RBP7.41□□□□□ -1.22
SS18-210ENST00000578700 FXYD7P58549 80 aa7.41□□□□□ -1.22
SS18-210ENST00000578700 KIR3DS1Q14943 382 aa7.41□□□□□ -1.22
SS18-210ENST00000578700 C18orf32Q8TCD1 76 aa7.41□□□□□ -1.22
SS18-210ENST00000578700 PACRGQ96M98 296 aaPredicted RBP7.41□□□□□ -1.22
SS18-210ENST00000578700 AP1S3Q96PC3 154 aa7.41□□□□□ -1.22
SS18-210ENST00000578700 C1QTNF4Q9BXJ3 329 aa7.41□□□□□ -1.22
SS18-210ENST00000578700 HSBP1O75506 76 aa7.4□□□□□ -1.22
SS18-210ENST00000578700 SERF1AO75920 110 aa7.4□□□□□ -1.22
SS18-210ENST00000578700 ESDP10768 282 aa7.4□□□□□ -1.22
SS18-210ENST00000578700 RNASEKQ6P5S7 137 aaKnown RBP7.4□□□□□ -1.22
SS18-210ENST00000578700 Q6ZQT7 251 aa7.4□□□□□ -1.22
SS18-210ENST00000578700 AMN1Q8IY45 258 aa7.4□□□□□ -1.22
SS18-210ENST00000578700 TMEM256Q8N2U0 113 aa7.4□□□□□ -1.22
SS18-210ENST00000578700 OR10D4PQ8NGN7 298 aa7.4□□□□□ -1.22
SS18-210ENST00000578700 CHCHD1Q96BP2 118 aaKnown RBP7.4□□□□□ -1.22
SS18-210ENST00000578700 PRELID3AQ96N28 172 aa7.4□□□□□ -1.22
SS18-210ENST00000578700 LINC01587Q99440 93 aa7.4□□□□□ -1.22
SS18-210ENST00000578700 HIST1H2BLQ99880 126 aa7.4□□□□□ -1.22
SS18-210ENST00000578700 LAMTOR2Q9Y2Q5 125 aa7.4□□□□□ -1.22
SS18-210ENST00000578700 KIAA1109Q2LD37 5005 aa7.39□□□□□ -1.23
SS18-210ENST00000578700 D6R8Y8 96 aa7.39□□□□□ -1.23
SS18-210ENST00000578700 SMIM6P0DI80 62 aa7.39□□□□□ -1.23
SS18-210ENST00000578700 HTN1P15515 57 aa7.39□□□□□ -1.23
SS18-210ENST00000578700 ZNF415Q09FC8 603 aa7.39□□□□□ -1.23
SS18-210ENST00000578700 ZNF124Q15973 351 aa7.39□□□□□ -1.23
SS18-210ENST00000578700 MRPL51Q4U2R6 128 aaKnown RBP7.39□□□□□ -1.23
SS18-210ENST00000578700 MORN3Q6PF18 240 aaPredicted RBP7.39□□□□□ -1.23
SS18-210ENST00000578700 TRPT1Q86TN4 253 aaKnown RBP7.39□□□□□ -1.23
SS18-210ENST00000578700 PRSS3P2Q8NHM4 247 aa7.39□□□□□ -1.23
SS18-210ENST00000578700 DPH3P1Q9H4G8 78 aa7.39□□□□□ -1.23
SS18-210ENST00000578700 SCRT2Q9NQ03 307 aa7.39□□□□□ -1.23
SS18-210ENST00000578700 MSRB1Q9NZV6 116 aa7.39□□□□□ -1.23
SS18-210ENST00000578700 IGHV3-16A0A0C4DH30 117 aa7.38□□□□□ -1.23
SS18-210ENST00000578700 PPP1R17O96001 155 aa7.38□□□□□ -1.23
SS18-210ENST00000578700 RNASE3P12724 160 aaKnown RBP7.38□□□□□ -1.23
SS18-210ENST00000578700 RAB4AP20338 218 aa7.38□□□□□ -1.23
SS18-210ENST00000578700 PMCHP20382 165 aa7.38□□□□□ -1.23
SS18-210ENST00000578700 EVI2AP22794 236 aa7.38□□□□□ -1.23
SS18-210ENST00000578700 IQCJQ1A5X6 159 aa7.38□□□□□ -1.23
SS18-210ENST00000578700 FA2HQ7L5A8 372 aa7.38□□□□□ -1.23
SS18-210ENST00000578700 ZNF575Q86XF7 245 aa7.38□□□□□ -1.23
SS18-210ENST00000578700 MRAP2Q96G30 205 aa7.38□□□□□ -1.23
SS18-210ENST00000578700 LINC00467Q9BRT7 94 aa7.38□□□□□ -1.23
SS18-210ENST00000578700 GOLT1BQ9Y3E0 138 aa7.38□□□□□ -1.23
SS18-210ENST00000578700 LINC00614P0C842 121 aa7.37□□□□□ -1.23
SS18-210ENST00000578700 AMTP48728 403 aa7.37□□□□□ -1.23
SS18-210ENST00000578700 NIT1Q86X76 327 aa7.37□□□□□ -1.23
SS18-210ENST00000578700 C9orf85Q96MD7 179 aa7.37□□□□□ -1.23
SS18-210ENST00000578700 MAP1LC3AQ9H492 121 aa7.37□□□□□ -1.23
SS18-210ENST00000578700 A0A0J9YWU9 116 aa7.36□□□□□ -1.23
SS18-210ENST00000578700 CRXO43186 299 aaPredicted RBP7.36□□□□□ -1.23
SS18-210ENST00000578700 NXPH4O95158 308 aa7.36□□□□□ -1.23
SS18-210ENST00000578700 MGPP08493 103 aa7.36□□□□□ -1.23
SS18-210ENST00000578700 CEMP1Q6PRD7 247 aaPredicted RBP7.36□□□□□ -1.23
SS18-210ENST00000578700 C14orf178Q8N769 122 aaPredicted RBP7.36□□□□□ -1.23
SS18-210ENST00000578700 OVOL2Q9BRP0 275 aa7.36□□□□□ -1.23
SS18-210ENST00000578700 SPXQ9BT56 116 aa7.36□□□□□ -1.23
SS18-210ENST00000578700 XCL2Q9UBD3 114 aa7.36□□□□□ -1.23
SS18-210ENST00000578700 TP53TG3Q9ULZ0 132 aa7.36□□□□□ -1.23
SS18-210ENST00000578700 PKHD1P08F94 4074 aa7.36□□□□□ -1.23
SS18-210ENST00000578700 IGHV3OR16-12A0A075B7B8 117 aa7.35□□□□□ -1.23
SS18-210ENST00000578700 NUPR2A6NF83 97 aa7.35□□□□□ -1.23
SS18-210ENST00000578700 IFITM10A6NMD0 228 aa7.35□□□□□ -1.23
SS18-210ENST00000578700 NCR2O95944 276 aa7.35□□□□□ -1.23
SS18-210ENST00000578700 RPL35AP18077 110 aaKnown RBP7.35□□□□□ -1.23
SS18-210ENST00000578700 ZNF876PQ49A33 203 aa7.35□□□□□ -1.23
SS18-210ENST00000578700 LINC00518Q8N0U6 118 aa7.35□□□□□ -1.23
SS18-210ENST00000578700 RNF185Q96GF1 192 aa7.35□□□□□ -1.23
SS18-210ENST00000578700 C12orf57Q99622 126 aa7.35□□□□□ -1.23
SS18-210ENST00000578700 NXT2Q9NPJ8 142 aaKnown RBP7.35□□□□□ -1.23
SS18-210ENST00000578700 AP5S1Q9NUS5 200 aa7.35□□□□□ -1.23
SS18-210ENST00000578700 MDFICQ9P1T7 246 aa7.35□□□□□ -1.23
SS18-210ENST00000578700 KLK5Q9Y337 293 aaPredicted RBP7.35□□□□□ -1.23
SS18-210ENST00000578700 LOC389332A0A1B0GUA5 103 aa7.34□□□□□ -1.23
SS18-210ENST00000578700 F5H697 171 aa7.34□□□□□ -1.23
SS18-210ENST00000578700 SMKR1H3BMG3 65 aa7.34□□□□□ -1.23
SS18-210ENST00000578700 TNFRSF6BO95407 300 aa7.34□□□□□ -1.23
SS18-210ENST00000578700 PIK3CD-AS1Q5SR53 167 aa7.34□□□□□ -1.23
SS18-210ENST00000578700 FAT2Q9NYQ8 4349 aa7.33□□□□□ -1.24
SS18-210ENST00000578700 DNAH17Q9UFH2 4485 aa7.33□□□□□ -1.24
SS18-210ENST00000578700 A8MWV9 139 aa7.33□□□□□ -1.24
SS18-210ENST00000578700 M0R2P5 195 aa7.33□□□□□ -1.24
SS18-210ENST00000578700 NUPR1O60356 82 aa7.33□□□□□ -1.24
SS18-210ENST00000578700 SCGB1D1O95968 90 aa7.33□□□□□ -1.24
SS18-210ENST00000578700 RBMY1A1P0DJD3 496 aaKnown RBP7.33□□□□□ -1.24
SS18-210ENST00000578700 RBMY1CP0DJD4 496 aa7.33□□□□□ -1.24
SS18-210ENST00000578700 LINC00310P59036 64 aa7.33□□□□□ -1.24
SS18-210ENST00000578700 RBMY1FQ15415 496 aaKnown RBP7.33□□□□□ -1.24
SS18-210ENST00000578700 PTH2Q96A98 100 aa7.33□□□□□ -1.24
SS18-210ENST00000578700 NDUFAF3Q9BU61 184 aa7.33□□□□□ -1.24
SS18-210ENST00000578700 CSTL1Q9H114 145 aa7.33□□□□□ -1.24
SS18-210ENST00000578700 GSN-AS1Q9NRJ2 163 aa7.33□□□□□ -1.24
SS18-210ENST00000578700 DNAH2Q9P225 4427 aa7.33□□□□□ -1.24
SS18-210ENST00000578700 H7C1H1 209 aa7.32□□□□□ -1.24
SS18-210ENST00000578700 NPYP01303 97 aa7.32□□□□□ -1.24
SS18-210ENST00000578700 IFI27P40305 119 aaPredicted RBP7.32□□□□□ -1.24
SS18-210ENST00000578700 S100A12P80511 92 aa7.32□□□□□ -1.24
SS18-210ENST00000578700 ZNF56Q15929 161 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms