RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 MDFICQ9P1T7 246 aa8.19□□□□□ -1.1
SKA2-204ENST00000578519 KIF25-AS1Q9Y6Z4 181 aa8.19□□□□□ -1.1
SKA2-204ENST00000578519 IGLV2-18A0A075B6J9 118 aa8.18□□□□□ -1.1
SKA2-204ENST00000578519 TRAV26-2A0A0B4J265 109 aa8.18□□□□□ -1.1
SKA2-204ENST00000578519 TRBV6-5A0A0K0K1A5 114 aa8.18□□□□□ -1.1
SKA2-204ENST00000578519 ADARB2-AS1A8MUL3 147 aa8.18□□□□□ -1.1
SKA2-204ENST00000578519 H0Y8G0 127 aa8.18□□□□□ -1.1
SKA2-204ENST00000578519 GATA1P15976 413 aaPredicted RBP8.18□□□□□ -1.1
SKA2-204ENST00000578519 Q6ZN92 141 aa8.18□□□□□ -1.1
SKA2-204ENST00000578519 LURAP1LQ8IV03 231 aa8.18□□□□□ -1.1
SKA2-204ENST00000578519 ABCA12Q86UK0 2595 aa8.17□□□□□ -1.1
SKA2-204ENST00000578519 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.17□□□□□ -1.1
SKA2-204ENST00000578519 J3QL48 77 aa8.17□□□□□ -1.1
SKA2-204ENST00000578519 M0R143 59 aa8.17□□□□□ -1.1
SKA2-204ENST00000578519 CIDEAO60543 219 aa8.17□□□□□ -1.1
SKA2-204ENST00000578519 HTN1P15515 57 aa8.17□□□□□ -1.1
SKA2-204ENST00000578519 SUMO4Q6EEV6 95 aa8.17□□□□□ -1.1
SKA2-204ENST00000578519 GTSCR1Q86UQ5 136 aa8.17□□□□□ -1.1
SKA2-204ENST00000578519 CSTL1Q9H114 145 aa8.17□□□□□ -1.1
SKA2-204ENST00000578519 EDA2RQ9HAV5 297 aa8.17□□□□□ -1.1
SKA2-204ENST00000578519 ZMAT5Q9UDW3 170 aaKnown RBP8.17□□□□□ -1.1
SKA2-204ENST00000578519 A0A087WWL8 130 aa8.16□□□□□ -1.1
SKA2-204ENST00000578519 A0A096LNJ9 63 aa8.16□□□□□ -1.1
SKA2-204ENST00000578519 RBMY1BA6NDE4 496 aaKnown RBP8.16□□□□□ -1.1
SKA2-204ENST00000578519 RBMY1EA6NEQ0 496 aaKnown RBP8.16□□□□□ -1.1
SKA2-204ENST00000578519 RBMY1DP0C7P1 496 aaKnown RBP8.16□□□□□ -1.1
SKA2-204ENST00000578519 FAM74A4Q5TZK3 123 aa8.16□□□□□ -1.1
SKA2-204ENST00000578519 LINC00173Q6ZV60 143 aa8.16□□□□□ -1.1
SKA2-204ENST00000578519 LINC00482Q8N8I6 264 aa8.16□□□□□ -1.1
SKA2-204ENST00000578519 CRYGDP07320 174 aa8.15□□□□□ -1.1
SKA2-204ENST00000578519 IGLC3P0DOY3 106 aa8.15□□□□□ -1.1
SKA2-204ENST00000578519 HNRNPA3P51991 378 aaKnown RBP8.15□□□□□ -1.1
SKA2-204ENST00000578519 LINC00315P59091 139 aa8.15□□□□□ -1.1
SKA2-204ENST00000578519 RHOHQ15669 191 aa8.15□□□□□ -1.1
SKA2-204ENST00000578519 ATOH7Q8N100 152 aa8.15□□□□□ -1.1
SKA2-204ENST00000578519 TOMM6Q96B49 74 aa8.15□□□□□ -1.1
SKA2-204ENST00000578519 C14orf144Q96I85 54 aa8.15□□□□□ -1.1
SKA2-204ENST00000578519 DNAJC30Q96LL9 226 aa8.15□□□□□ -1.1
SKA2-204ENST00000578519 SCGB3A1Q96QR1 104 aa8.15□□□□□ -1.1
SKA2-204ENST00000578519 XCL2Q9UBD3 114 aa8.15□□□□□ -1.1
SKA2-204ENST00000578519 CYSLTR1Q9Y271 337 aa8.15□□□□□ -1.1
SKA2-204ENST00000578519 APCP25054 2843 aa8.14□□□□□ -1.11
SKA2-204ENST00000578519 SPRY2O43597 315 aa8.14□□□□□ -1.11
SKA2-204ENST00000578519 GAS8-AS1O95177 125 aa8.14□□□□□ -1.11
SKA2-204ENST00000578519 POLR2KP53803 58 aaKnown RBP8.14□□□□□ -1.11
SKA2-204ENST00000578519 ZNF124Q15973 351 aa8.14□□□□□ -1.11
SKA2-204ENST00000578519 RPL39LQ96EH5 51 aaKnown RBP8.14□□□□□ -1.11
SKA2-204ENST00000578519 TMEM141Q96I45 108 aa8.14□□□□□ -1.11
SKA2-204ENST00000578519 C18orf15Q96N68 181 aa8.14□□□□□ -1.11
SKA2-204ENST00000578519 TNFRSF18Q9Y5U5 241 aa8.14□□□□□ -1.11
SKA2-204ENST00000578519 TRAV12-1A0A0B4J245 112 aa8.13□□□□□ -1.11
SKA2-204ENST00000578519 TRBV27A0A0K0K1C4 114 aa8.13□□□□□ -1.11
SKA2-204ENST00000578519 SDHAF1A6NFY7 115 aa8.13□□□□□ -1.11
SKA2-204ENST00000578519 I3L3M4 83 aa8.13□□□□□ -1.11
SKA2-204ENST00000578519 M0QY20 66 aa8.13□□□□□ -1.11
SKA2-204ENST00000578519 DPM2O94777 84 aa8.13□□□□□ -1.11
SKA2-204ENST00000578519 RBMY1A1P0DJD3 496 aaKnown RBP8.13□□□□□ -1.11
SKA2-204ENST00000578519 RBMY1CP0DJD4 496 aa8.13□□□□□ -1.11
SKA2-204ENST00000578519 IGLL1P15814 213 aa8.13□□□□□ -1.11
SKA2-204ENST00000578519 RBMY1FQ15415 496 aaKnown RBP8.13□□□□□ -1.11
SKA2-204ENST00000578519 PAPPA-AS1Q5QFB9 102 aa8.13□□□□□ -1.11
SKA2-204ENST00000578519 HIST2H2BDQ6DRA6 164 aa8.13□□□□□ -1.11
SKA2-204ENST00000578519 SLC25A34Q6PIV7 304 aa8.13□□□□□ -1.11
SKA2-204ENST00000578519 C2orf66Q6UXQ4 117 aa8.13□□□□□ -1.11
SKA2-204ENST00000578519 ZFP2Q6ZN57 461 aa8.13□□□□□ -1.11
SKA2-204ENST00000578519 ERASQ7Z444 233 aa8.13□□□□□ -1.11
SKA2-204ENST00000578519 TMEM263Q8WUH6 116 aaKnown RBP8.13□□□□□ -1.11
SKA2-204ENST00000578519 C16orf74Q96GX8 76 aa8.13□□□□□ -1.11
SKA2-204ENST00000578519 JPT2Q9H910 190 aa8.13□□□□□ -1.11
SKA2-204ENST00000578519 MRPS16Q9Y3D3 137 aaKnown RBP8.13□□□□□ -1.11
SKA2-204ENST00000578519 HIVEP2P31629 2446 aa8.13□□□□□ -1.11
SKA2-204ENST00000578519 RS1O15537 224 aa8.12□□□□□ -1.11
SKA2-204ENST00000578519 IGKCP01834 107 aa8.12□□□□□ -1.11
SKA2-204ENST00000578519 PLNP26678 52 aa8.12□□□□□ -1.11
SKA2-204ENST00000578519 CHD6Q8TD26 2715 aa8.11□□□□□ -1.11
SKA2-204ENST00000578519 ITPR3Q14573 2671 aa8.11□□□□□ -1.11
SKA2-204ENST00000578519 IGHV3OR16-12A0A075B7B8 117 aa8.11□□□□□ -1.11
SKA2-204ENST00000578519 A0A087WX48 190 aa8.11□□□□□ -1.11
SKA2-204ENST00000578519 KRTAP10-3P60369 221 aa8.11□□□□□ -1.11
SKA2-204ENST00000578519 RRN3P1Q2M238 152 aa8.11□□□□□ -1.11
SKA2-204ENST00000578519 C1orf158Q8N1D5 194 aa8.11□□□□□ -1.11
SKA2-204ENST00000578519 C11orf72Q8NBR9 251 aa8.11□□□□□ -1.11
SKA2-204ENST00000578519 CITED1Q99966 193 aa8.11□□□□□ -1.11
SKA2-204ENST00000578519 hDV102S1A0JD36 115 aa8.1□□□□□ -1.11
SKA2-204ENST00000578519 AZU1P20160 251 aa8.1□□□□□ -1.11
SKA2-204ENST00000578519 RIPPLY3P57055 190 aa8.1□□□□□ -1.11
SKA2-204ENST00000578519 SMAGPQ0VAQ4 97 aa8.1□□□□□ -1.11
SKA2-204ENST00000578519 DAZ2Q13117 558 aaKnown RBP8.1□□□□□ -1.11
SKA2-204ENST00000578519 OR4C5Q8NGB2 326 aa8.1□□□□□ -1.11
SKA2-204ENST00000578519 TIMM17AQ99595 171 aa8.1□□□□□ -1.11
SKA2-204ENST00000578519 CELSR2Q9HCU4 2923 aa8.09□□□□□ -1.11
SKA2-204ENST00000578519 CCDC168Q8NDH2 2452 aa8.09□□□□□ -1.11
SKA2-204ENST00000578519 SMIM9A6NGZ8 99 aa8.09□□□□□ -1.11
SKA2-204ENST00000578519 IGHV3-53P01767 116 aa8.09□□□□□ -1.11
SKA2-204ENST00000578519 NPSP0C0P6 89 aa8.09□□□□□ -1.11
SKA2-204ENST00000578519 COX8AP10176 69 aa8.09□□□□□ -1.11
SKA2-204ENST00000578519 RPL35AP18077 110 aaKnown RBP8.09□□□□□ -1.11
SKA2-204ENST00000578519 ODF1Q14990 250 aa8.09□□□□□ -1.11
SKA2-204ENST00000578519 CFAP126Q5VTH2 177 aa8.09□□□□□ -1.11
SKA2-204ENST00000578519 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 178.1 ms