RNA–Protein interactions for RNA: ENST00000577474.2

TRAPPC8-203, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-203ENST00000577474 FXYD1O00168 92 aa1.39□□□□□ -2.19
TRAPPC8-203ENST00000577474 PRB4P10163 310 aaPredicted RBP1.39□□□□□ -2.19
TRAPPC8-203ENST00000577474 MEIG1Q5JSS6 88 aa1.39□□□□□ -2.19
TRAPPC8-203ENST00000577474 C12orf73Q69YU5 71 aa1.39□□□□□ -2.19
TRAPPC8-203ENST00000577474 AGPAT4-IT1Q9H0P7 198 aa1.39□□□□□ -2.19
TRAPPC8-203ENST00000577474 TRPM7Q96QT4 1865 aa1.39□□□□□ -2.19
TRAPPC8-203ENST00000577474 RBAKDNA6NC62 111 aa1.38□□□□□ -2.19
TRAPPC8-203ENST00000577474 DLEU1O43261 78 aa1.38□□□□□ -2.19
TRAPPC8-203ENST00000577474 CBLN1P23435 193 aa1.38□□□□□ -2.19
TRAPPC8-203ENST00000577474 C4orf33Q8N1A6 199 aa1.38□□□□□ -2.19
TRAPPC8-203ENST00000577474 TMEM14BQ9NUH8 114 aa1.38□□□□□ -2.19
TRAPPC8-203ENST00000577474 ZDBF2Q9HCK1 2354 aa1.37□□□□□ -2.19
TRAPPC8-203ENST00000577474 ROCK2O75116 1388 aaKnown RBP1.37□□□□□ -2.19
TRAPPC8-203ENST00000577474 TRAV12-3A0A0B4J271 114 aa1.37□□□□□ -2.19
TRAPPC8-203ENST00000577474 MCRIP1C9JLW8 97 aa1.37□□□□□ -2.19
TRAPPC8-203ENST00000577474 K7EIL1 84 aa1.37□□□□□ -2.19
TRAPPC8-203ENST00000577474 SSBP1Q04837 148 aaKnown RBP1.37□□□□□ -2.19
TRAPPC8-203ENST00000577474 TMEM203Q969S6 136 aa1.37□□□□□ -2.19
TRAPPC8-203ENST00000577474 SEC11CQ9BY50 192 aa1.37□□□□□ -2.19
TRAPPC8-203ENST00000577474 SERP1Q9Y6X1 66 aa1.37□□□□□ -2.19
TRAPPC8-203ENST00000577474 CFTRP13569 1480 aa1.37□□□□□ -2.19
TRAPPC8-203ENST00000577474 PTPRMP28827 1452 aa1.37□□□□□ -2.19
TRAPPC8-203ENST00000577474 ZNF518AQ6AHZ1 1483 aa1.37□□□□□ -2.19
TRAPPC8-203ENST00000577474 MYH6P13533 1939 aa1.36□□□□□ -2.19
TRAPPC8-203ENST00000577474 HIST1H1DP16402 221 aaKnown RBP1.36□□□□□ -2.19
TRAPPC8-203ENST00000577474 FAM74A4Q5TZK3 123 aa1.36□□□□□ -2.19
TRAPPC8-203ENST00000577474 SMG6Q86US8 1419 aaKnown RBP1.36□□□□□ -2.19
TRAPPC8-203ENST00000577474 PLAC4Q8WY50 150 aa1.36□□□□□ -2.19
TRAPPC8-203ENST00000577474 C2orf88Q9BSF0 95 aa1.36□□□□□ -2.19
TRAPPC8-203ENST00000577474 CASZ1Q86V15 1759 aa1.36□□□□□ -2.19
TRAPPC8-203ENST00000577474 CITO14578 2027 aa1.35□□□□□ -2.19
TRAPPC8-203ENST00000577474 ATG2AQ2TAZ0 1938 aa1.35□□□□□ -2.19
TRAPPC8-203ENST00000577474 NCOA3Q9Y6Q9 1424 aa1.35□□□□□ -2.19
TRAPPC8-203ENST00000577474 A0A1B0GV90 55 aa1.35□□□□□ -2.19
TRAPPC8-203ENST00000577474 TFF1P04155 84 aa1.35□□□□□ -2.19
TRAPPC8-203ENST00000577474 AKAIN1P0CW23 69 aa1.35□□□□□ -2.19
TRAPPC8-203ENST00000577474 UBE2G1P62253 170 aa1.35□□□□□ -2.19
TRAPPC8-203ENST00000577474 SPINK9Q5DT21 86 aa1.35□□□□□ -2.19
TRAPPC8-203ENST00000577474 DSCR8Q96T75 97 aa1.35□□□□□ -2.19
TRAPPC8-203ENST00000577474 SPANXDQ9BXN6 97 aa1.35□□□□□ -2.19
TRAPPC8-203ENST00000577474 BCL9LQ86UU0 1499 aa1.35□□□□□ -2.19
TRAPPC8-203ENST00000577474 Q56UQ5 140 aa1.34□□□□□ -2.19
TRAPPC8-203ENST00000577474 Q6AWC8 147 aa1.34□□□□□ -2.19
TRAPPC8-203ENST00000577474 CCL3L1P16619 93 aa1.33□□□□□ -2.2
TRAPPC8-203ENST00000577474 ZNF818PQ6ZRF7 136 aa1.33□□□□□ -2.2
TRAPPC8-203ENST00000577474 PP6455Q8WZ26 134 aa1.33□□□□□ -2.2
TRAPPC8-203ENST00000577474 DLEC1Q9Y238 1755 aa1.33□□□□□ -2.2
TRAPPC8-203ENST00000577474 AKAP11Q9UKA4 1901 aa1.32□□□□□ -2.2
TRAPPC8-203ENST00000577474 TRBV10-3A0A0K0K1G6 114 aa1.32□□□□□ -2.2
TRAPPC8-203ENST00000577474 IFNGP01579 166 aa1.32□□□□□ -2.2
TRAPPC8-203ENST00000577474 ELOF1P60002 83 aaKnown RBP1.32□□□□□ -2.2
TRAPPC8-203ENST00000577474 NPC2P61916 151 aa1.32□□□□□ -2.2
TRAPPC8-203ENST00000577474 MRPS10P82664 201 aaKnown RBP1.32□□□□□ -2.2
TRAPPC8-203ENST00000577474 WHAMMP3Q1A5X7 153 aa1.32□□□□□ -2.2
TRAPPC8-203ENST00000577474 PLXNA2O75051 1894 aa1.32□□□□□ -2.2
TRAPPC8-203ENST00000577474 IFT140Q96RY7 1462 aa1.31□□□□□ -2.2
TRAPPC8-203ENST00000577474 KDM6BO15054 1643 aa1.31□□□□□ -2.2
TRAPPC8-203ENST00000577474 APOC4-APOC2K7ER74 178 aa1.31□□□□□ -2.2
TRAPPC8-203ENST00000577474 APOC2P02655 101 aa1.31□□□□□ -2.2
TRAPPC8-203ENST00000577474 SPINT3P49223 89 aa1.31□□□□□ -2.2
TRAPPC8-203ENST00000577474 CCL8P80075 99 aa1.31□□□□□ -2.2
TRAPPC8-203ENST00000577474 COX7B2Q8TF08 81 aa1.31□□□□□ -2.2
TRAPPC8-203ENST00000577474 FBN3Q75N90 2809 aa1.3□□□□□ -2.2
TRAPPC8-203ENST00000577474 ESPL1Q14674 2120 aa1.3□□□□□ -2.2
TRAPPC8-203ENST00000577474 A0A096LNT2 108 aa1.3□□□□□ -2.2
TRAPPC8-203ENST00000577474 RPL37P61927 97 aaKnown RBP1.3□□□□□ -2.2
TRAPPC8-203ENST00000577474 C20orf197Q8N268 126 aa1.3□□□□□ -2.2
TRAPPC8-203ENST00000577474 PPP3R2Q96LZ3 170 aa1.3□□□□□ -2.2
TRAPPC8-203ENST00000577474 MBD5Q9P267 1494 aa1.3□□□□□ -2.2
TRAPPC8-203ENST00000577474 ZNF142P52746 1687 aaPredicted RBP1.29□□□□□ -2.2
TRAPPC8-203ENST00000577474 TRBV7-1A0A0A6YYK4 115 aa1.29□□□□□ -2.2
TRAPPC8-203ENST00000577474 TNFP01375 233 aa1.29□□□□□ -2.2
TRAPPC8-203ENST00000577474 SCN3BQ9NY72 215 aa1.29□□□□□ -2.2
TRAPPC8-203ENST00000577474 RREB1Q92766 1687 aa1.29□□□□□ -2.2
TRAPPC8-203ENST00000577474 LAMA4Q16363 1823 aa1.29□□□□□ -2.2
TRAPPC8-203ENST00000577474 UBE2D1P51668 147 aa1.28□□□□□ -2.2
TRAPPC8-203ENST00000577474 ZNF137PP52743 207 aa1.28□□□□□ -2.2
TRAPPC8-203ENST00000577474 S100A7L2Q5SY68 101 aa1.28□□□□□ -2.2
TRAPPC8-203ENST00000577474 SPTSSBQ8NFR3 76 aa1.28□□□□□ -2.2
TRAPPC8-203ENST00000577474 C10orf82Q8WW14 230 aa1.28□□□□□ -2.2
TRAPPC8-203ENST00000577474 SCP2D1Q9UJQ7 156 aa1.28□□□□□ -2.2
TRAPPC8-203ENST00000577474 GNG8Q9UK08 70 aa1.28□□□□□ -2.2
TRAPPC8-203ENST00000577474 V9GYV3 84 aa1.28□□□□□ -2.2
TRAPPC8-203ENST00000577474 KTN1Q86UP2 1357 aaKnown RBP1.28□□□□□ -2.2
TRAPPC8-203ENST00000577474 MYH9P35579 1960 aaKnown RBP1.28□□□□□ -2.2
TRAPPC8-203ENST00000577474 KIF13AQ9H1H9 1805 aa1.27□□□□□ -2.21
TRAPPC8-203ENST00000577474 LOC100130705A0A1B0GUX0 176 aa1.27□□□□□ -2.21
TRAPPC8-203ENST00000577474 LINC00587B1AMM8 73 aa1.27□□□□□ -2.21
TRAPPC8-203ENST00000577474 GNG4P50150 75 aa1.27□□□□□ -2.21
TRAPPC8-203ENST00000577474 C8orf59Q8N0T1 100 aaPredicted RBP1.27□□□□□ -2.21
TRAPPC8-203ENST00000577474 LAMB1P07942 1786 aa1.26□□□□□ -2.21
TRAPPC8-203ENST00000577474 F6UZH7 168 aa1.26□□□□□ -2.21
TRAPPC8-203ENST00000577474 CORTO00230 105 aa1.26□□□□□ -2.21
TRAPPC8-203ENST00000577474 SIX6O95475 246 aa1.26□□□□□ -2.21
TRAPPC8-203ENST00000577474 TPPP2P59282 170 aa1.26□□□□□ -2.21
TRAPPC8-203ENST00000577474 LSM10Q969L4 123 aaKnown RBP1.26□□□□□ -2.21
TRAPPC8-203ENST00000577474 IER3IP1Q9Y5U9 82 aa1.26□□□□□ -2.21
TRAPPC8-203ENST00000577474 AFDNP55196 1824 aaKnown RBP1.26□□□□□ -2.21
TRAPPC8-203ENST00000577474 ABCA1O95477 2261 aa1.26□□□□□ -2.21
TRAPPC8-203ENST00000577474 EIF4G3O43432 1585 aaKnown RBP1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms