RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 DEFB130AP0DP74 79 aa5.6□□□□□ -1.51
CCDC40-215ENST00000576033 RIGQ13278 110 aa5.6□□□□□ -1.51
CCDC40-215ENST00000576033 ANXA2RQ3ZCQ2 193 aa5.6□□□□□ -1.51
CCDC40-215ENST00000576033 OR10J3Q5JRS4 329 aa5.6□□□□□ -1.51
CCDC40-215ENST00000576033 DNLZQ5SXM8 178 aa5.6□□□□□ -1.51
CCDC40-215ENST00000576033 DMRTA1Q5VZB9 504 aa5.6□□□□□ -1.51
CCDC40-215ENST00000576033 Q6ZTI0 123 aa5.6□□□□□ -1.51
CCDC40-215ENST00000576033 LINC00518Q8N0U6 118 aa5.6□□□□□ -1.51
CCDC40-215ENST00000576033 TMEM263Q8WUH6 116 aaKnown RBP5.6□□□□□ -1.51
CCDC40-215ENST00000576033 PACRGQ96M98 296 aaPredicted RBP5.6□□□□□ -1.51
CCDC40-215ENST00000576033 HIST1H2BLQ99880 126 aa5.6□□□□□ -1.51
CCDC40-215ENST00000576033 ALKBH7Q9BT30 221 aaPredicted RBP5.6□□□□□ -1.51
CCDC40-215ENST00000576033 MRPL16Q9NX20 251 aaKnown RBP5.6□□□□□ -1.51
CCDC40-215ENST00000576033 MDFICQ9P1T7 246 aa5.6□□□□□ -1.51
CCDC40-215ENST00000576033 IGHV1OR15-1A0A075B7D0 117 aa5.59□□□□□ -1.51
CCDC40-215ENST00000576033 GAGE12BA1L429 117 aa5.59□□□□□ -1.51
CCDC40-215ENST00000576033 SMIM9A6NGZ8 99 aa5.59□□□□□ -1.51
CCDC40-215ENST00000576033 GNRH2O43555 120 aa5.59□□□□□ -1.51
CCDC40-215ENST00000576033 GAGE7O76087 117 aa5.59□□□□□ -1.51
CCDC40-215ENST00000576033 OR5AL1P0C617 328 aa5.59□□□□□ -1.51
CCDC40-215ENST00000576033 GAGE12FP0CL80 117 aa5.59□□□□□ -1.51
CCDC40-215ENST00000576033 GAGE12GP0CL81 117 aa5.59□□□□□ -1.51
CCDC40-215ENST00000576033 GAGE12IP0CL82 117 aa5.59□□□□□ -1.51
CCDC40-215ENST00000576033 SMIM6P0DI80 62 aa5.59□□□□□ -1.51
CCDC40-215ENST00000576033 MED14OSP0DP75 135 aa5.59□□□□□ -1.51
CCDC40-215ENST00000576033 CEMP1Q6PRD7 247 aaPredicted RBP5.59□□□□□ -1.51
CCDC40-215ENST00000576033 LYZL1Q6UWQ5 148 aa5.59□□□□□ -1.51
CCDC40-215ENST00000576033 TMEM256Q8N2U0 113 aa5.59□□□□□ -1.51
CCDC40-215ENST00000576033 FER1L6-AS1Q8NA97 138 aa5.59□□□□□ -1.51
CCDC40-215ENST00000576033 C16orf74Q96GX8 76 aa5.59□□□□□ -1.51
CCDC40-215ENST00000576033 DNAH10Q8IVF4 4471 aa5.59□□□□□ -1.52
CCDC40-215ENST00000576033 NACAE9PAV3 2078 aa5.59□□□□□ -1.52
CCDC40-215ENST00000576033 MUC4Q99102 2169 aa5.58□□□□□ -1.52
CCDC40-215ENST00000576033 TRAV21A0A0B4J279 112 aa5.58□□□□□ -1.52
CCDC40-215ENST00000576033 GRIFINA4D1Z8 144 aa5.58□□□□□ -1.52
CCDC40-215ENST00000576033 IGLL5B9A064 214 aa5.58□□□□□ -1.52
CCDC40-215ENST00000576033 F2Z2F3 143 aa5.58□□□□□ -1.52
CCDC40-215ENST00000576033 NUPR1O60356 82 aa5.58□□□□□ -1.52
CCDC40-215ENST00000576033 IGHV3-53P01767 116 aa5.58□□□□□ -1.52
CCDC40-215ENST00000576033 ORM1P02763 201 aa5.58□□□□□ -1.52
CCDC40-215ENST00000576033 SPART-AS1P0CW21 52 aa5.58□□□□□ -1.52
CCDC40-215ENST00000576033 SRIP30626 198 aa5.58□□□□□ -1.52
CCDC40-215ENST00000576033 CAMPP49913 170 aa5.58□□□□□ -1.52
CCDC40-215ENST00000576033 RAB4BP61018 213 aa5.58□□□□□ -1.52
CCDC40-215ENST00000576033 DAD1P61803 113 aa5.58□□□□□ -1.52
CCDC40-215ENST00000576033 KIAA1644Q3SXP7 199 aa5.58□□□□□ -1.52
CCDC40-215ENST00000576033 C18orf32Q8TCD1 76 aa5.58□□□□□ -1.52
CCDC40-215ENST00000576033 C20orf144Q9BQM9 153 aa5.58□□□□□ -1.52
CCDC40-215ENST00000576033 SCRT2Q9NQ03 307 aa5.58□□□□□ -1.52
CCDC40-215ENST00000576033 TMSB15BA0A087X1C1 80 aa5.57□□□□□ -1.52
CCDC40-215ENST00000576033 DEFB131BA0A096LNP1 70 aa5.57□□□□□ -1.52
CCDC40-215ENST00000576033 TRGV1A0A0A0MS02 117 aa5.57□□□□□ -1.52
CCDC40-215ENST00000576033 SERF1AO75920 110 aa5.57□□□□□ -1.52
CCDC40-215ENST00000576033 NXPH4O95158 308 aa5.57□□□□□ -1.52
CCDC40-215ENST00000576033 AKR1D1P51857 326 aa5.57□□□□□ -1.52
CCDC40-215ENST00000576033 TDRG1Q3Y452 100 aa5.57□□□□□ -1.52
CCDC40-215ENST00000576033 URB1-AS1Q96HZ7 61 aa5.57□□□□□ -1.52
CCDC40-215ENST00000576033 TIMM8BQ9Y5J9 83 aaPredicted RBP5.57□□□□□ -1.52
CCDC40-215ENST00000576033 FAT2Q9NYQ8 4349 aa5.57□□□□□ -1.52
CCDC40-215ENST00000576033 TRAV10A0A0B4J240 114 aa5.56□□□□□ -1.52
CCDC40-215ENST00000576033 IGHV3-16A0A0C4DH30 117 aa5.56□□□□□ -1.52
CCDC40-215ENST00000576033 NUPR2A6NF83 97 aa5.56□□□□□ -1.52
CCDC40-215ENST00000576033 LYRM9A8MSI8 78 aa5.56□□□□□ -1.52
CCDC40-215ENST00000576033 PYY3Q5JQD4 70 aa5.56□□□□□ -1.52
CCDC40-215ENST00000576033 FAM104BQ5XKR9 115 aa5.56□□□□□ -1.52
CCDC40-215ENST00000576033 LINC00612Q8N6U2 182 aa5.56□□□□□ -1.52
CCDC40-215ENST00000576033 BORCS7Q96B45 105 aa5.56□□□□□ -1.52
CCDC40-215ENST00000576033 RNF185Q96GF1 192 aa5.56□□□□□ -1.52
CCDC40-215ENST00000576033 LINC00467Q9BRT7 94 aa5.56□□□□□ -1.52
CCDC40-215ENST00000576033 TMEM191AQ9H0A3 160 aa5.56□□□□□ -1.52
CCDC40-215ENST00000576033 A0A0J9YY99 117 aa5.55□□□□□ -1.52
CCDC40-215ENST00000576033 F5H768 121 aa5.55□□□□□ -1.52
CCDC40-215ENST00000576033 RNASE3P12724 160 aaKnown RBP5.55□□□□□ -1.52
CCDC40-215ENST00000576033 FABP4P15090 132 aa5.55□□□□□ -1.52
CCDC40-215ENST00000576033 NTF3P20783 257 aa5.55□□□□□ -1.52
CCDC40-215ENST00000576033 S100A2P29034 98 aa5.55□□□□□ -1.52
CCDC40-215ENST00000576033 CACNG7P62955 275 aa5.55□□□□□ -1.52
CCDC40-215ENST00000576033 ZNF415Q09FC8 603 aa5.55□□□□□ -1.52
CCDC40-215ENST00000576033 PDZD11Q5EBL8 140 aa5.55□□□□□ -1.52
CCDC40-215ENST00000576033 FAM159AQ6UWV7 190 aa5.55□□□□□ -1.52
CCDC40-215ENST00000576033 BAGE3Q86Y29 109 aa5.55□□□□□ -1.52
CCDC40-215ENST00000576033 OR10D4PQ8NGN7 298 aa5.55□□□□□ -1.52
CCDC40-215ENST00000576033 OR10AG1Q8NH19 301 aa5.55□□□□□ -1.52
CCDC40-215ENST00000576033 TMEM18Q96B42 140 aa5.55□□□□□ -1.52
CCDC40-215ENST00000576033 KCNS1Q96KK3 526 aa5.55□□□□□ -1.52
CCDC40-215ENST00000576033 APLNQ9ULZ1 77 aa5.55□□□□□ -1.52
CCDC40-215ENST00000576033 MUC21A0A0G2JKD1 596 aa5.54□□□□□ -1.52
CCDC40-215ENST00000576033 MUC21A0A140T8X8 626 aa5.54□□□□□ -1.52
CCDC40-215ENST00000576033 LCE6AA0A183 80 aa5.54□□□□□ -1.52
CCDC40-215ENST00000576033 H3BVH4 76 aa5.54□□□□□ -1.52
CCDC40-215ENST00000576033 DAZ2Q13117 558 aaKnown RBP5.54□□□□□ -1.52
CCDC40-215ENST00000576033 JOSD1Q15040 202 aaPredicted RBP5.54□□□□□ -1.52
CCDC40-215ENST00000576033 IQCJQ1A5X6 159 aa5.54□□□□□ -1.52
CCDC40-215ENST00000576033 AMN1Q8IY45 258 aa5.54□□□□□ -1.52
CCDC40-215ENST00000576033 POM121L12Q8N7R1 296 aa5.54□□□□□ -1.52
CCDC40-215ENST00000576033 LINC00476Q8WZB0 136 aa5.54□□□□□ -1.52
CCDC40-215ENST00000576033 ZNF479Q96JC4 524 aa5.54□□□□□ -1.52
CCDC40-215ENST00000576033 C9orf85Q96MD7 179 aa5.54□□□□□ -1.52
CCDC40-215ENST00000576033 C12orf57Q99622 126 aa5.54□□□□□ -1.52
CCDC40-215ENST00000576033 TPPP3Q9BW30 176 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms