RNA–Protein interactions for RNA: ENST00000575709.5

USP6-206, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 8,185 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-206ENST00000575709 IGHV3-30-3P0DP02 117 aa8.29□□□□□ -1.08
USP6-206ENST00000575709 IGHV3-30-5P0DP03 117 aa8.29□□□□□ -1.08
USP6-206ENST00000575709 BRWD3Q6RI45 1802 aa8.29□□□□□ -1.08
USP6-206ENST00000575709 NDUFA4L2Q9NRX3 87 aa8.28□□□□□ -1.08
USP6-206ENST00000575709 E9PLD3 99 aa8.28□□□□□ -1.08
USP6-206ENST00000575709 IGLV3-21P80748 117 aaPredicted RBP8.28□□□□□ -1.08
USP6-206ENST00000575709 COX7CP15954 63 aa8.28□□□□□ -1.08
USP6-206ENST00000575709 RNF144BQ7Z419 303 aa8.28□□□□□ -1.08
USP6-206ENST00000575709 FAM19A3Q7Z5A8 133 aa8.28□□□□□ -1.08
USP6-206ENST00000575709 OOSP1A8MZH6 123 aa8.28□□□□□ -1.08
USP6-206ENST00000575709 IGHV1-69DA0A0B4J2H0 117 aa8.28□□□□□ -1.08
USP6-206ENST00000575709 EP300Q09472 2414 aaPredicted RBP8.28□□□□□ -1.08
USP6-206ENST00000575709 FAM19A5Q7Z5A7 132 aaPredicted RBP8.28□□□□□ -1.08
USP6-206ENST00000575709 PLXNA2O75051 1894 aa8.28□□□□□ -1.08
USP6-206ENST00000575709 FAM222AQ5U5X8 452 aa8.27□□□□□ -1.08
USP6-206ENST00000575709 TMEM263Q8WUH6 116 aaKnown RBP8.27□□□□□ -1.08
USP6-206ENST00000575709 SPRR3Q9UBC9 169 aa8.27□□□□□ -1.08
USP6-206ENST00000575709 ITGBL1O95965 494 aaPredicted RBP8.27□□□□□ -1.09
USP6-206ENST00000575709 SLPIP03973 132 aa8.27□□□□□ -1.09
USP6-206ENST00000575709 OXLD1Q5BKU9 147 aa8.27□□□□□ -1.09
USP6-206ENST00000575709 Q8N9L7 120 aa8.27□□□□□ -1.09
USP6-206ENST00000575709 C9orf85Q96MD7 179 aa8.27□□□□□ -1.09
USP6-206ENST00000575709 GYPEP15421 78 aa8.27□□□□□ -1.09
USP6-206ENST00000575709 K7EQD1 137 aa8.26□□□□□ -1.09
USP6-206ENST00000575709 RUSC1-AS1Q66K80 236 aa8.26□□□□□ -1.09
USP6-206ENST00000575709 TOMM6Q96B49 74 aa8.26□□□□□ -1.09
USP6-206ENST00000575709 QRFPP83859 136 aa8.26□□□□□ -1.09
USP6-206ENST00000575709 NFE4Q86UQ8 179 aa8.26□□□□□ -1.09
USP6-206ENST00000575709 B9D2Q9BPU9 175 aa8.26□□□□□ -1.09
USP6-206ENST00000575709 LOXP28300 417 aaPredicted RBP8.26□□□□□ -1.09
USP6-206ENST00000575709 LYPD2Q6UXB3 125 aa8.26□□□□□ -1.09
USP6-206ENST00000575709 SPTAN1Q13813 2472 aaKnown RBP8.26□□□□□ -1.09
USP6-206ENST00000575709 TRBV6-6A0A0A6YYG2 114 aa8.26□□□□□ -1.09
USP6-206ENST00000575709 C3orf84H3BNL1 204 aa8.26□□□□□ -1.09
USP6-206ENST00000575709 NDUFA1O15239 70 aa8.26□□□□□ -1.09
USP6-206ENST00000575709 TNRC6CQ9HCJ0 1690 aaKnown RBP8.26□□□□□ -1.09
USP6-206ENST00000575709 NDUFA4O00483 81 aa8.26□□□□□ -1.09
USP6-206ENST00000575709 SLX1AQ9BQ83 275 aa8.26□□□□□ -1.09
USP6-206ENST00000575709 G3V318 75 aa8.26□□□□□ -1.09
USP6-206ENST00000575709 Q6Q795 121 aa8.25□□□□□ -1.09
USP6-206ENST00000575709 WFDC10AQ9H1F0 79 aa8.25□□□□□ -1.09
USP6-206ENST00000575709 IGKV1D-17A0A075B6S4 117 aa8.25□□□□□ -1.09
USP6-206ENST00000575709 CSDC2Q9Y534 153 aaKnown RBP8.25□□□□□ -1.09
USP6-206ENST00000575709 SAP25Q8TEE9 199 aa8.25□□□□□ -1.09
USP6-206ENST00000575709 A0A096LNI7 61 aa8.25□□□□□ -1.09
USP6-206ENST00000575709 C11orf86A6NJI1 115 aa8.25□□□□□ -1.09
USP6-206ENST00000575709 FAM110DQ8TAY7 271 aaPredicted RBP8.24□□□□□ -1.09
USP6-206ENST00000575709 PIFOQ8TCI5 191 aa8.24□□□□□ -1.09
USP6-206ENST00000575709 MIAQ16674 131 aa8.24□□□□□ -1.09
USP6-206ENST00000575709 POM121L12Q8N7R1 296 aa8.24□□□□□ -1.09
USP6-206ENST00000575709 SIRPDQ9H106 197 aa8.24□□□□□ -1.09
USP6-206ENST00000575709 ADAMTSL1Q8N6G6 1762 aa8.24□□□□□ -1.09
USP6-206ENST00000575709 C5orf63A6NC05 138 aa8.24□□□□□ -1.09
USP6-206ENST00000575709 K7EM74 188 aa8.23□□□□□ -1.09
USP6-206ENST00000575709 IGHV1-69P01742 117 aa8.23□□□□□ -1.09
USP6-206ENST00000575709 RBX1P62877 108 aa8.23□□□□□ -1.09
USP6-206ENST00000575709 ODF1Q14990 250 aa8.23□□□□□ -1.09
USP6-206ENST00000575709 CNOT1A5YKK6 2376 aaKnown RBP8.23□□□□□ -1.09
USP6-206ENST00000575709 ZMAT4Q9H898 229 aa8.23□□□□□ -1.09
USP6-206ENST00000575709 B4DSR2 109 aa8.22□□□□□ -1.09
USP6-206ENST00000575709 CRYGDP07320 174 aa8.22□□□□□ -1.09
USP6-206ENST00000575709 MIFP14174 115 aa8.22□□□□□ -1.09
USP6-206ENST00000575709 ATRXP46100 2492 aa8.22□□□□□ -1.09
USP6-206ENST00000575709 IGKV1-6A0A0C4DH72 117 aa8.22□□□□□ -1.09
USP6-206ENST00000575709 DSCR9P59020 149 aa8.22□□□□□ -1.09
USP6-206ENST00000575709 MRPS36P82909 103 aaKnown RBP8.22□□□□□ -1.09
USP6-206ENST00000575709 PRRC2AP48634 2157 aaKnown RBP8.22□□□□□ -1.09
USP6-206ENST00000575709 IGHV1-58A0A0C4DH39 117 aa8.22□□□□□ -1.09
USP6-206ENST00000575709 GATA3P23771 443 aa8.22□□□□□ -1.09
USP6-206ENST00000575709 EBI3Q14213 229 aa8.22□□□□□ -1.09
USP6-206ENST00000575709 Q6ZS49 121 aa8.22□□□□□ -1.09
USP6-206ENST00000575709 WFDC13Q8IUB5 93 aa8.21□□□□□ -1.09
USP6-206ENST00000575709 C1orf158Q8N1D5 194 aa8.21□□□□□ -1.09
USP6-206ENST00000575709 IMUPQ9GZP8 106 aa8.21□□□□□ -1.09
USP6-206ENST00000575709 WNK1Q9H4A3 2382 aa8.21□□□□□ -1.09
USP6-206ENST00000575709 ROS1P08922 2347 aa8.21□□□□□ -1.09
USP6-206ENST00000575709 APRG1Q8IVJ8 170 aa8.21□□□□□ -1.09
USP6-206ENST00000575709 C22orf34Q6ZV56 151 aa8.21□□□□□ -1.1
USP6-206ENST00000575709 LY6HO94772 140 aa8.21□□□□□ -1.1
USP6-206ENST00000575709 ANAPC1Q9H1A4 1944 aa8.21□□□□□ -1.1
USP6-206ENST00000575709 MRPS12O15235 138 aaKnown RBP8.21□□□□□ -1.1
USP6-206ENST00000575709 LTBP4Q8N2S1 1624 aa8.2□□□□□ -1.1
USP6-206ENST00000575709 PCNX1Q96RV3 2341 aa8.2□□□□□ -1.1
USP6-206ENST00000575709 Q6ZR03 302 aa8.2□□□□□ -1.1
USP6-206ENST00000575709 SHANK3Q9BYB0 1731 aa8.2□□□□□ -1.1
USP6-206ENST00000575709 WT1P19544 449 aaPredicted RBP8.2□□□□□ -1.1
USP6-206ENST00000575709 MALRD1Q5VYJ5 2156 aa8.2□□□□□ -1.1
USP6-206ENST00000575709 LOC107984640A0A0U1RRK4 108 aa8.2□□□□□ -1.1
USP6-206ENST00000575709 ZNF833PQ6ZTB9 187 aa8.2□□□□□ -1.1
USP6-206ENST00000575709 TPSG1Q9NRR2 321 aa8.2□□□□□ -1.1
USP6-206ENST00000575709 LINC01356Q8N9X3 169 aa8.2□□□□□ -1.1
USP6-206ENST00000575709 TRBV7-3A0A075B6L6 115 aa8.2□□□□□ -1.1
USP6-206ENST00000575709 COL8A2P25067 703 aa8.2□□□□□ -1.1
USP6-206ENST00000575709 TICRRQ7Z2Z1 1910 aa8.19□□□□□ -1.1
USP6-206ENST00000575709 MSRB1Q9NZV6 116 aa8.19□□□□□ -1.1
USP6-206ENST00000575709 ESM1Q9NQ30 184 aa8.19□□□□□ -1.1
USP6-206ENST00000575709 DENND4CQ5VZ89 1909 aa8.19□□□□□ -1.1
USP6-206ENST00000575709 PINLYPA6NC86 204 aa8.19□□□□□ -1.1
USP6-206ENST00000575709 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.19□□□□□ -1.1
USP6-206ENST00000575709 VPREB3Q9UKI3 123 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms