RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 SIVA1O15304 175 aa5.86□□□□□ -1.47
SMG6-216ENST00000575176 PDE6DO43924 150 aa5.86□□□□□ -1.47
SMG6-216ENST00000575176 CIDEAO60543 219 aa5.86□□□□□ -1.47
SMG6-216ENST00000575176 MGST1P10620 155 aaKnown RBP5.86□□□□□ -1.47
SMG6-216ENST00000575176 PRR27Q6MZM9 219 aa5.86□□□□□ -1.47
SMG6-216ENST00000575176 VAX2Q9UIW0 290 aa5.86□□□□□ -1.47
SMG6-216ENST00000575176 TNFRSF18Q9Y5U5 241 aa5.86□□□□□ -1.47
SMG6-216ENST00000575176 VPS13BQ7Z7G8 4022 aa5.85□□□□□ -1.47
SMG6-216ENST00000575176 A0A087WWL8 130 aa5.85□□□□□ -1.47
SMG6-216ENST00000575176 GZMBP10144 247 aa5.85□□□□□ -1.47
SMG6-216ENST00000575176 BTF3P20290 206 aaKnown RBP5.85□□□□□ -1.47
SMG6-216ENST00000575176 TTC32Q5I0X7 151 aa5.85□□□□□ -1.47
SMG6-216ENST00000575176 CNFNQ9BYD5 112 aa5.85□□□□□ -1.47
SMG6-216ENST00000575176 MUC21A0A0G2JKD1 596 aa5.84□□□□□ -1.47
SMG6-216ENST00000575176 MUC21A0A140T8X8 626 aa5.84□□□□□ -1.47
SMG6-216ENST00000575176 C9JQL5 133 aa5.84□□□□□ -1.47
SMG6-216ENST00000575176 M0R381 172 aa5.84□□□□□ -1.47
SMG6-216ENST00000575176 RHODO00212 210 aa5.84□□□□□ -1.47
SMG6-216ENST00000575176 NDUFS6O75380 124 aaKnown RBP5.84□□□□□ -1.47
SMG6-216ENST00000575176 S100A4P26447 101 aaKnown RBP5.84□□□□□ -1.47
SMG6-216ENST00000575176 CTRLP40313 264 aa5.84□□□□□ -1.47
SMG6-216ENST00000575176 KRTAP10-2P60368 255 aa5.84□□□□□ -1.47
SMG6-216ENST00000575176 LINC01556Q5JQF7 62 aa5.84□□□□□ -1.47
SMG6-216ENST00000575176 ZFP82Q8N141 532 aa5.84□□□□□ -1.47
SMG6-216ENST00000575176 OR10G8Q8NGN5 311 aa5.84□□□□□ -1.47
SMG6-216ENST00000575176 RBFOX3A6NFN3 312 aa5.83□□□□□ -1.48
SMG6-216ENST00000575176 TMEM250H0YL14 139 aa5.83□□□□□ -1.48
SMG6-216ENST00000575176 IFNA1P01562 189 aa5.83□□□□□ -1.48
SMG6-216ENST00000575176 TAGLN2P37802 199 aaKnown RBP5.83□□□□□ -1.48
SMG6-216ENST00000575176 GNG4P50150 75 aa5.83□□□□□ -1.48
SMG6-216ENST00000575176 UBE2D3P61077 147 aa5.83□□□□□ -1.48
SMG6-216ENST00000575176 UBE2D2P62837 147 aa5.83□□□□□ -1.48
SMG6-216ENST00000575176 PCNPQ8WW12 178 aaKnown RBP5.83□□□□□ -1.48
SMG6-216ENST00000575176 GTSF1Q8WW33 167 aa5.83□□□□□ -1.48
SMG6-216ENST00000575176 FAM210AQ96ND0 272 aa5.83□□□□□ -1.48
SMG6-216ENST00000575176 MSRB1Q9NZV6 116 aa5.83□□□□□ -1.48
SMG6-216ENST00000575176 PHLDA3Q9Y5J5 127 aa5.83□□□□□ -1.48
SMG6-216ENST00000575176 GAGE12JA6NER3 117 aa5.82□□□□□ -1.48
SMG6-216ENST00000575176 TEX46H3BTG2 121 aa5.82□□□□□ -1.48
SMG6-216ENST00000575176 SRP19P09132 144 aaKnown RBP5.82□□□□□ -1.48
SMG6-216ENST00000575176 BLOC1S1P78537 153 aa5.82□□□□□ -1.48
SMG6-216ENST00000575176 SRSF3P84103 164 aaKnown RBP5.82□□□□□ -1.48
SMG6-216ENST00000575176 GAGE1Q13065 139 aa5.82□□□□□ -1.48
SMG6-216ENST00000575176 GAGE4Q13068 117 aa5.82□□□□□ -1.48
SMG6-216ENST00000575176 GAGE5Q13069 117 aa5.82□□□□□ -1.48
SMG6-216ENST00000575176 GAGE13Q4V321 117 aa5.82□□□□□ -1.48
SMG6-216ENST00000575176 TOR2AQ5JU69 321 aa5.82□□□□□ -1.48
SMG6-216ENST00000575176 LELP1Q5T871 98 aa5.82□□□□□ -1.48
SMG6-216ENST00000575176 FAM74A4Q5TZK3 123 aa5.82□□□□□ -1.48
SMG6-216ENST00000575176 SH2D6Q7Z4S9 175 aa5.82□□□□□ -1.48
SMG6-216ENST00000575176 SYT8Q8NBV8 401 aa5.82□□□□□ -1.48
SMG6-216ENST00000575176 NEXN-AS1Q8NBZ9 246 aa5.82□□□□□ -1.48
SMG6-216ENST00000575176 NUDT10Q8NFP7 164 aa5.82□□□□□ -1.48
SMG6-216ENST00000575176 OCC1Q8TAD7 63 aa5.82□□□□□ -1.48
SMG6-216ENST00000575176 NUDT11Q96G61 164 aa5.82□□□□□ -1.48
SMG6-216ENST00000575176 PRADC1Q9BSG0 188 aa5.82□□□□□ -1.48
SMG6-216ENST00000575176 RNASE7Q9H1E1 156 aaKnown RBP5.82□□□□□ -1.48
SMG6-216ENST00000575176 GTSF1LQ9H1H1 148 aa5.82□□□□□ -1.48
SMG6-216ENST00000575176 MED9Q9NWA0 146 aa5.82□□□□□ -1.48
SMG6-216ENST00000575176 TRBV10-1A0A0K0K1A3 114 aa5.81□□□□□ -1.48
SMG6-216ENST00000575176 TEX261Q6UWH6 196 aa5.81□□□□□ -1.48
SMG6-216ENST00000575176 OR2D3Q8NGH3 330 aa5.81□□□□□ -1.48
SMG6-216ENST00000575176 ATP6V0E2Q8NHE4 81 aa5.81□□□□□ -1.48
SMG6-216ENST00000575176 DNAJC30Q96LL9 226 aa5.81□□□□□ -1.48
SMG6-216ENST00000575176 LY96Q9Y6Y9 160 aa5.81□□□□□ -1.48
SMG6-216ENST00000575176 IGHV3-38A0A0C4DH36 116 aa5.8□□□□□ -1.48
SMG6-216ENST00000575176 LRCOL1A6NCL2 159 aa5.8□□□□□ -1.48
SMG6-216ENST00000575176 IBA57-AS1B1ANH7 110 aa5.8□□□□□ -1.48
SMG6-216ENST00000575176 K7EP13 123 aa5.8□□□□□ -1.48
SMG6-216ENST00000575176 SOHLH1Q5JUK2 328 aa5.8□□□□□ -1.48
SMG6-216ENST00000575176 NTM-AS1Q6ZSK4 140 aa5.8□□□□□ -1.48
SMG6-216ENST00000575176 FAM231DQ6ZW35 169 aa5.8□□□□□ -1.48
SMG6-216ENST00000575176 LINC01551Q86U37 167 aa5.8□□□□□ -1.48
SMG6-216ENST00000575176 FER1L6-AS1Q8NA97 138 aa5.8□□□□□ -1.48
SMG6-216ENST00000575176 M0QY20 66 aa5.79□□□□□ -1.48
SMG6-216ENST00000575176 P01737 135 aa5.79□□□□□ -1.48
SMG6-216ENST00000575176 RAB4BP61018 213 aa5.79□□□□□ -1.48
SMG6-216ENST00000575176 WFDC2Q14508 124 aa5.79□□□□□ -1.48
SMG6-216ENST00000575176 LYZL1Q6UWQ5 148 aa5.79□□□□□ -1.48
SMG6-216ENST00000575176 AP1S3Q96PC3 154 aa5.79□□□□□ -1.48
SMG6-216ENST00000575176 RPP21Q9H633 154 aaKnown RBP5.79□□□□□ -1.48
SMG6-216ENST00000575176 TRBV7-3A0A075B6L6 115 aa5.78□□□□□ -1.48
SMG6-216ENST00000575176 A0A087WTM6 91 aa5.78□□□□□ -1.48
SMG6-216ENST00000575176 EVI2AP22794 236 aa5.78□□□□□ -1.48
SMG6-216ENST00000575176 FUSP35637 526 aaKnown RBP eCLIP5.78□□□□□ -1.48
SMG6-216ENST00000575176 RPS20P60866 119 aaKnown RBP5.78□□□□□ -1.48
SMG6-216ENST00000575176 LAGE3Q14657 143 aa5.78□□□□□ -1.48
SMG6-216ENST00000575176 CT83Q5H943 113 aa5.78□□□□□ -1.48
SMG6-216ENST00000575176 SUMO4Q6EEV6 95 aa5.78□□□□□ -1.48
SMG6-216ENST00000575176 SPATA12Q7Z6I5 190 aa5.78□□□□□ -1.48
SMG6-216ENST00000575176 NIT1Q86X76 327 aa5.78□□□□□ -1.48
SMG6-216ENST00000575176 MAPKAPK5-AS1Q8N8E1 139 aa5.78□□□□□ -1.48
SMG6-216ENST00000575176 KRTAP4-5Q9BYR2 181 aa5.78□□□□□ -1.48
SMG6-216ENST00000575176 MYCBP2O75592 4640 aa5.78□□□□□ -1.48
SMG6-216ENST00000575176 FOXA3P55318 350 aaPredicted RBP5.77□□□□□ -1.49
SMG6-216ENST00000575176 ZNF56Q15929 161 aa5.77□□□□□ -1.49
SMG6-216ENST00000575176 OR10J3Q5JRS4 329 aa5.77□□□□□ -1.49
SMG6-216ENST00000575176 SPANXN1Q5VSR9 72 aa5.77□□□□□ -1.49
SMG6-216ENST00000575176 WDR73Q6P4I2 378 aa5.77□□□□□ -1.49
SMG6-216ENST00000575176 DAZ4Q86SG3 579 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms