RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 KRBOX1C9JBD0 128 aa8.2□□□□□ -1.1
CCDC40-210ENST00000573903 H3BVH4 76 aa8.2□□□□□ -1.1
CCDC40-210ENST00000573903 SMR3BP02814 79 aaPredicted RBP8.2□□□□□ -1.1
CCDC40-210ENST00000573903 RNASE3P12724 160 aaKnown RBP8.2□□□□□ -1.1
CCDC40-210ENST00000573903 CRIP1P50238 77 aa8.2□□□□□ -1.1
CCDC40-210ENST00000573903 CENPWQ5EE01 88 aa8.2□□□□□ -1.1
CCDC40-210ENST00000573903 Q6ZSN1 163 aa8.2□□□□□ -1.1
CCDC40-210ENST00000573903 PTH2Q96A98 100 aa8.2□□□□□ -1.1
CCDC40-210ENST00000573903 SMIM12Q96EX1 92 aa8.2□□□□□ -1.1
CCDC40-210ENST00000573903 TMEM70Q9BUB7 260 aa8.2□□□□□ -1.1
CCDC40-210ENST00000573903 Q9HAA7 133 aa8.2□□□□□ -1.1
CCDC40-210ENST00000573903 IL36BQ9NZH7 164 aa8.2□□□□□ -1.1
CCDC40-210ENST00000573903 IBA57-AS1B1ANH7 110 aa8.19□□□□□ -1.1
CCDC40-210ENST00000573903 GNG4P50150 75 aa8.19□□□□□ -1.1
CCDC40-210ENST00000573903 ZNF506Q5JVG8 444 aa8.19□□□□□ -1.1
CCDC40-210ENST00000573903 PIK3CD-AS1Q5SR53 167 aa8.19□□□□□ -1.1
CCDC40-210ENST00000573903 DNLZQ5SXM8 178 aa8.19□□□□□ -1.1
CCDC40-210ENST00000573903 PRR27Q6MZM9 219 aa8.19□□□□□ -1.1
CCDC40-210ENST00000573903 SYT8Q8NBV8 401 aa8.19□□□□□ -1.1
CCDC40-210ENST00000573903 DERL1Q9BUN8 251 aa8.19□□□□□ -1.1
CCDC40-210ENST00000573903 MLST8Q9BVC4 326 aa8.19□□□□□ -1.1
CCDC40-210ENST00000573903 MED9Q9NWA0 146 aa8.19□□□□□ -1.1
CCDC40-210ENST00000573903 TMSB15BA0A087X1C1 80 aa8.18□□□□□ -1.1
CCDC40-210ENST00000573903 TRBV6-4A0A1B0GX49 114 aa8.18□□□□□ -1.1
CCDC40-210ENST00000573903 IGHV3-30P01768 117 aa8.18□□□□□ -1.1
CCDC40-210ENST00000573903 IGHV3-33P01772 117 aa8.18□□□□□ -1.1
CCDC40-210ENST00000573903 CXCL1P09341 107 aa8.18□□□□□ -1.1
CCDC40-210ENST00000573903 IGHV3-30-3P0DP02 117 aa8.18□□□□□ -1.1
CCDC40-210ENST00000573903 IGHV3-30-5P0DP03 117 aa8.18□□□□□ -1.1
CCDC40-210ENST00000573903 Q8N814 137 aa8.18□□□□□ -1.1
CCDC40-210ENST00000573903 SLC25A29Q8N8R3 303 aa8.18□□□□□ -1.1
CCDC40-210ENST00000573903 GRIFINA4D1Z8 144 aa8.17□□□□□ -1.1
CCDC40-210ENST00000573903 LRCOL1A6NCL2 159 aa8.17□□□□□ -1.1
CCDC40-210ENST00000573903 PGPEP1LA6NFU8 196 aa8.17□□□□□ -1.1
CCDC40-210ENST00000573903 A8MWV9 139 aa8.17□□□□□ -1.1
CCDC40-210ENST00000573903 RS1O15537 224 aa8.17□□□□□ -1.1
CCDC40-210ENST00000573903 MGST1P10620 155 aaKnown RBP8.17□□□□□ -1.1
CCDC40-210ENST00000573903 HAMPP81172 84 aa8.17□□□□□ -1.1
CCDC40-210ENST00000573903 LELP1Q5T871 98 aa8.17□□□□□ -1.1
CCDC40-210ENST00000573903 CFAP126Q5VTH2 177 aa8.17□□□□□ -1.1
CCDC40-210ENST00000573903 LYPD6BQ8NI32 183 aa8.17□□□□□ -1.1
CCDC40-210ENST00000573903 TM2D2Q9BX73 214 aa8.17□□□□□ -1.1
CCDC40-210ENST00000573903 BIN3Q9NQY0 253 aa8.17□□□□□ -1.1
CCDC40-210ENST00000573903 PHLDA3Q9Y5J5 127 aa8.17□□□□□ -1.1
CCDC40-210ENST00000573903 IGHV3-73A0A0B4J1V6 119 aa8.16□□□□□ -1.1
CCDC40-210ENST00000573903 RBFOX3A6NFN3 312 aa8.16□□□□□ -1.1
CCDC40-210ENST00000573903 TMEM250H0YL14 139 aa8.16□□□□□ -1.1
CCDC40-210ENST00000573903 ARMS2P0C7Q2 107 aa8.16□□□□□ -1.1
CCDC40-210ENST00000573903 LAGE3Q14657 143 aa8.16□□□□□ -1.1
CCDC40-210ENST00000573903 ZFP82Q8N141 532 aa8.16□□□□□ -1.1
CCDC40-210ENST00000573903 ATP6V0E2Q8NHE4 81 aa8.16□□□□□ -1.1
CCDC40-210ENST00000573903 DAZAP1Q96EP5 407 aaKnown RBP8.16□□□□□ -1.1
CCDC40-210ENST00000573903 GTSF1LQ9H1H1 148 aa8.16□□□□□ -1.1
CCDC40-210ENST00000573903 RHODO00212 210 aa8.15□□□□□ -1.1
CCDC40-210ENST00000573903 TOR2AQ5JU69 321 aa8.15□□□□□ -1.1
CCDC40-210ENST00000573903 PARLQ9H300 379 aa8.15□□□□□ -1.1
CCDC40-210ENST00000573903 TRBV20OR9-2A0A075B6H5 130 aa8.14□□□□□ -1.11
CCDC40-210ENST00000573903 RAB19A4D1S5 217 aa8.14□□□□□ -1.11
CCDC40-210ENST00000573903 M0R381 172 aa8.14□□□□□ -1.11
CCDC40-210ENST00000573903 IGLV2-8P01709 118 aa8.14□□□□□ -1.11
CCDC40-210ENST00000573903 RPS20P60866 119 aaKnown RBP8.14□□□□□ -1.11
CCDC40-210ENST00000573903 RPL19P84098 196 aaKnown RBP8.14□□□□□ -1.11
CCDC40-210ENST00000573903 ZFP2Q6ZN57 461 aa8.14□□□□□ -1.11
CCDC40-210ENST00000573903 EIF5A2Q9GZV4 153 aaKnown RBP8.14□□□□□ -1.11
CCDC40-210ENST00000573903 DMBT1Q9UGM3 2413 aaPredicted RBP8.14□□□□□ -1.11
CCDC40-210ENST00000573903 TRAV8-3A0A0A6YYJ7 113 aa8.13□□□□□ -1.11
CCDC40-210ENST00000573903 XKRY2A2RUG3 117 aa8.13□□□□□ -1.11
CCDC40-210ENST00000573903 J3QL48 77 aa8.13□□□□□ -1.11
CCDC40-210ENST00000573903 NDUFS6O75380 124 aaKnown RBP8.13□□□□□ -1.11
CCDC40-210ENST00000573903 P01737 135 aa8.13□□□□□ -1.11
CCDC40-210ENST00000573903 TEX261Q6UWH6 196 aa8.13□□□□□ -1.11
CCDC40-210ENST00000573903 FAM210AQ96ND0 272 aa8.13□□□□□ -1.11
CCDC40-210ENST00000573903 C19orf71A6NCJ1 209 aa8.12□□□□□ -1.11
CCDC40-210ENST00000573903 SNAI2O43623 268 aa8.12□□□□□ -1.11
CCDC40-210ENST00000573903 PLA2G1BP04054 148 aaKnown RBP8.12□□□□□ -1.11
CCDC40-210ENST00000573903 OR5AL1P0C617 328 aa8.12□□□□□ -1.11
CCDC40-210ENST00000573903 CEBPGP53567 150 aa8.12□□□□□ -1.11
CCDC40-210ENST00000573903 FAM74A4Q5TZK3 123 aa8.12□□□□□ -1.11
CCDC40-210ENST00000573903 SPANXN1Q5VSR9 72 aa8.12□□□□□ -1.11
CCDC40-210ENST00000573903 DMRTA1Q5VZB9 504 aa8.12□□□□□ -1.11
CCDC40-210ENST00000573903 OR2D3Q8NGH3 330 aa8.12□□□□□ -1.11
CCDC40-210ENST00000573903 A0A087WWC5 75 aa8.11□□□□□ -1.11
CCDC40-210ENST00000573903 GAGE12JA6NER3 117 aa8.11□□□□□ -1.11
CCDC40-210ENST00000573903 GAGE1Q13065 139 aa8.11□□□□□ -1.11
CCDC40-210ENST00000573903 GAGE4Q13068 117 aa8.11□□□□□ -1.11
CCDC40-210ENST00000573903 GAGE5Q13069 117 aa8.11□□□□□ -1.11
CCDC40-210ENST00000573903 GAGE13Q4V321 117 aa8.11□□□□□ -1.11
CCDC40-210ENST00000573903 RMI2Q96E14 147 aa8.11□□□□□ -1.11
CCDC40-210ENST00000573903 SFRP2Q96HF1 295 aa8.11□□□□□ -1.11
CCDC40-210ENST00000573903 COX11Q9Y6N1 276 aa8.11□□□□□ -1.11
CCDC40-210ENST00000573903 URGCP-MRPS24S4R325 110 aa8.11□□□□□ -1.11
CCDC40-210ENST00000573903 FER1L6-AS1Q8NA97 138 aa8.1□□□□□ -1.11
CCDC40-210ENST00000573903 OR10AG1Q8NH19 301 aa8.1□□□□□ -1.11
CCDC40-210ENST00000573903 AP1S3Q96PC3 154 aa8.1□□□□□ -1.11
CCDC40-210ENST00000573903 SMIM7Q9BQ49 75 aa8.1□□□□□ -1.11
CCDC40-210ENST00000573903 JPT2Q9H910 190 aa8.1□□□□□ -1.11
CCDC40-210ENST00000573903 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.09□□□□□ -1.11
CCDC40-210ENST00000573903 A0A087WWL8 130 aa8.09□□□□□ -1.11
CCDC40-210ENST00000573903 UFSP1Q6NVU6 142 aa8.09□□□□□ -1.11
CCDC40-210ENST00000573903 TPPP3Q9BW30 176 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms