RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 GAGE13Q4V321 117 aa11.65□□□□□ -0.54
SMG6-214ENST00000573827 OR10J3Q5JRS4 329 aa11.65□□□□□ -0.54
SMG6-214ENST00000573827 TMUB2Q71RG4 321 aa11.65□□□□□ -0.54
SMG6-214ENST00000573827 TMSB15BA0A087X1C1 80 aa11.64□□□□□ -0.55
SMG6-214ENST00000573827 XGP55808 180 aa11.64□□□□□ -0.55
SMG6-214ENST00000573827 CCL20P78556 96 aa11.64□□□□□ -0.55
SMG6-214ENST00000573827 RHODO00212 210 aa11.63□□□□□ -0.55
SMG6-214ENST00000573827 EREGO14944 169 aa11.63□□□□□ -0.55
SMG6-214ENST00000573827 H2AFB1P0C5Y9 115 aa11.63□□□□□ -0.55
SMG6-214ENST00000573827 BOLA1Q9Y3E2 137 aa11.63□□□□□ -0.55
SMG6-214ENST00000573827 A0A087WWL8 130 aa11.62□□□□□ -0.55
SMG6-214ENST00000573827 TRAV1-1A0A0B4J248 108 aa11.62□□□□□ -0.55
SMG6-214ENST00000573827 IGHV3-30P01768 117 aa11.62□□□□□ -0.55
SMG6-214ENST00000573827 IGHV3-33P01772 117 aa11.62□□□□□ -0.55
SMG6-214ENST00000573827 S100A9P06702 114 aaKnown RBP11.62□□□□□ -0.55
SMG6-214ENST00000573827 IGHV3-30-3P0DP02 117 aa11.62□□□□□ -0.55
SMG6-214ENST00000573827 IGHV3-30-5P0DP03 117 aa11.62□□□□□ -0.55
SMG6-214ENST00000573827 RPL19P84098 196 aaKnown RBP11.62□□□□□ -0.55
SMG6-214ENST00000573827 SYT8Q8NBV8 401 aa11.62□□□□□ -0.55
SMG6-214ENST00000573827 CXCL1P09341 107 aa11.61□□□□□ -0.55
SMG6-214ENST00000573827 TPT1P13693 172 aaKnown RBP11.61□□□□□ -0.55
SMG6-214ENST00000573827 LAGE3Q14657 143 aa11.61□□□□□ -0.55
SMG6-214ENST00000573827 C11orf52Q96A22 123 aa11.61□□□□□ -0.55
SMG6-214ENST00000573827 SSBP4Q9BWG4 385 aaPredicted RBP11.61□□□□□ -0.55
SMG6-214ENST00000573827 PHLDA3Q9Y5J5 127 aa11.61□□□□□ -0.55
SMG6-214ENST00000573827 M0R381 172 aa11.6□□□□□ -0.55
SMG6-214ENST00000573827 EIF5AP63241 154 aaKnown RBP11.6□□□□□ -0.55
SMG6-214ENST00000573827 FAM74A4Q5TZK3 123 aa11.6□□□□□ -0.55
SMG6-214ENST00000573827 BAGE2Q86Y30 109 aa11.6□□□□□ -0.55
SMG6-214ENST00000573827 ZFP82Q8N141 532 aa11.6□□□□□ -0.55
SMG6-214ENST00000573827 OR10AG1Q8NH19 301 aa11.6□□□□□ -0.55
SMG6-214ENST00000573827 SNAI2O43623 268 aa11.59□□□□□ -0.55
SMG6-214ENST00000573827 TCTE3Q8IZS6 198 aa11.59□□□□□ -0.55
SMG6-214ENST00000573827 DERL1Q9BUN8 251 aa11.59□□□□□ -0.55
SMG6-214ENST00000573827 Q9HAA7 133 aa11.59□□□□□ -0.55
SMG6-214ENST00000573827 PFDN1O60925 122 aa11.58□□□□□ -0.56
SMG6-214ENST00000573827 IGLV2-8P01709 118 aa11.58□□□□□ -0.56
SMG6-214ENST00000573827 RPL35P42766 123 aaKnown RBP11.58□□□□□ -0.56
SMG6-214ENST00000573827 WFDC2Q14508 124 aa11.58□□□□□ -0.56
SMG6-214ENST00000573827 PRR27Q6MZM9 219 aa11.58□□□□□ -0.56
SMG6-214ENST00000573827 A0A087WWC5 75 aa11.57□□□□□ -0.56
SMG6-214ENST00000573827 TRBV10-1A0A0K0K1A3 114 aa11.57□□□□□ -0.56
SMG6-214ENST00000573827 UBE2D3P61077 147 aa11.57□□□□□ -0.56
SMG6-214ENST00000573827 UBE2D2P62837 147 aa11.57□□□□□ -0.56
SMG6-214ENST00000573827 DAZ4Q86SG3 579 aaKnown RBP11.57□□□□□ -0.56
SMG6-214ENST00000573827 OR10G8Q8NGN5 311 aa11.57□□□□□ -0.56
SMG6-214ENST00000573827 DAZ3Q9NR90 486 aaKnown RBP11.57□□□□□ -0.56
SMG6-214ENST00000573827 OR5AL1P0C617 328 aa11.56□□□□□ -0.56
SMG6-214ENST00000573827 SULT1A2P50226 295 aa11.56□□□□□ -0.56
SMG6-214ENST00000573827 RAB5CP51148 216 aa11.56□□□□□ -0.56
SMG6-214ENST00000573827 NIT1Q86X76 327 aa11.56□□□□□ -0.56
SMG6-214ENST00000573827 Q8N814 137 aa11.56□□□□□ -0.56
SMG6-214ENST00000573827 MANBALQ9NQG1 85 aa11.56□□□□□ -0.56
SMG6-214ENST00000573827 GNG13Q9P2W3 67 aa11.56□□□□□ -0.56
SMG6-214ENST00000573827 KIF25-AS1Q9Y6Z4 181 aa11.56□□□□□ -0.56
SMG6-214ENST00000573827 DMBT1Q9UGM3 2413 aaPredicted RBP11.56□□□□□ -0.56
SMG6-214ENST00000573827 FLG2Q5D862 2391 aaPredicted RBP11.55□□□□□ -0.56
SMG6-214ENST00000573827 GCSHP23434 173 aa11.55□□□□□ -0.56
SMG6-214ENST00000573827 NTN5Q8WTR8 489 aaPredicted RBP11.55□□□□□ -0.56
SMG6-214ENST00000573827 DNAJC30Q96LL9 226 aa11.55□□□□□ -0.56
SMG6-214ENST00000573827 PSCAO43653 123 aa11.54□□□□□ -0.56
SMG6-214ENST00000573827 Q6ZNX1 250 aa11.54□□□□□ -0.56
SMG6-214ENST00000573827 TRBV20OR9-2A0A075B6H5 130 aa11.53□□□□□ -0.56
SMG6-214ENST00000573827 TRBV7-3A0A075B6L6 115 aa11.53□□□□□ -0.56
SMG6-214ENST00000573827 MUC21A0A0G2JKD1 596 aa11.53□□□□□ -0.56
SMG6-214ENST00000573827 MUC21A0A140T8X8 626 aa11.53□□□□□ -0.56
SMG6-214ENST00000573827 C19orf71A6NCJ1 209 aa11.53□□□□□ -0.56
SMG6-214ENST00000573827 RAB4BP61018 213 aa11.53□□□□□ -0.56
SMG6-214ENST00000573827 CENPWQ5EE01 88 aa11.53□□□□□ -0.56
SMG6-214ENST00000573827 NEXN-AS1Q8NBZ9 246 aa11.53□□□□□ -0.56
SMG6-214ENST00000573827 IGLV5-52A0A0A0MRZ9 124 aa11.52□□□□□ -0.57
SMG6-214ENST00000573827 C1QBP02746 253 aa11.52□□□□□ -0.57
SMG6-214ENST00000573827 IGLC6P0CF74 106 aa11.52□□□□□ -0.57
SMG6-214ENST00000573827 TRAV8-3A0A0A6YYJ7 113 aa11.51□□□□□ -0.57
SMG6-214ENST00000573827 RAB19A4D1S5 217 aa11.51□□□□□ -0.57
SMG6-214ENST00000573827 RPL36AP83881 106 aaKnown RBP11.51□□□□□ -0.57
SMG6-214ENST00000573827 EIF5AL1Q6IS14 154 aaKnown RBP11.51□□□□□ -0.57
SMG6-214ENST00000573827 RPL36ALQ969Q0 106 aaKnown RBP11.51□□□□□ -0.57
SMG6-214ENST00000573827 TM2D2Q9BX73 214 aa11.51□□□□□ -0.57
SMG6-214ENST00000573827 GZMBP10144 247 aa11.5□□□□□ -0.57
SMG6-214ENST00000573827 MEF2BQ02080 365 aaPredicted RBP11.5□□□□□ -0.57
SMG6-214ENST00000573827 SLC51BQ86UW2 128 aa11.5□□□□□ -0.57
SMG6-214ENST00000573827 TOR2AQ5JU69 321 aa11.49□□□□□ -0.57
SMG6-214ENST00000573827 ATRAIDQ6UW56 229 aa11.49□□□□□ -0.57
SMG6-214ENST00000573827 TMEM70Q9BUB7 260 aa11.49□□□□□ -0.57
SMG6-214ENST00000573827 CHCHD7Q9BUK0 85 aa11.49□□□□□ -0.57
SMG6-214ENST00000573827 FAM30AQ9NZY2 134 aa11.49□□□□□ -0.57
SMG6-214ENST00000573827 TRBV6-8A0A0A6YYG3 113 aa11.48□□□□□ -0.57
SMG6-214ENST00000573827 RBFOX3A6NFN3 312 aa11.48□□□□□ -0.57
SMG6-214ENST00000573827 EPM2AB3EWF7 344 aa11.48□□□□□ -0.57
SMG6-214ENST00000573827 BCL2P10415 239 aa11.48□□□□□ -0.57
SMG6-214ENST00000573827 HAMPP81172 84 aa11.48□□□□□ -0.57
SMG6-214ENST00000573827 ZNF56Q15929 161 aa11.48□□□□□ -0.57
SMG6-214ENST00000573827 SPANXN1Q5VSR9 72 aa11.48□□□□□ -0.57
SMG6-214ENST00000573827 C9orf62Q8N4C0 152 aa11.48□□□□□ -0.57
SMG6-214ENST00000573827 SMIM12Q96EX1 92 aa11.48□□□□□ -0.57
SMG6-214ENST00000573827 VAX2Q9UIW0 290 aa11.48□□□□□ -0.57
SMG6-214ENST00000573827 KLK12Q9UKR0 248 aa11.48□□□□□ -0.57
SMG6-214ENST00000573827 NTM-AS1Q6ZSK4 140 aa11.47□□□□□ -0.57
SMG6-214ENST00000573827 LECT2O14960 151 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms