RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 ZFP2Q6ZN57 461 aa6.95□□□□□ -1.3
GTF3C1-213ENST00000571886 Q6ZRN7 208 aaPredicted RBP6.95□□□□□ -1.3
GTF3C1-213ENST00000571886 OR10AG1Q8NH19 301 aa6.95□□□□□ -1.3
GTF3C1-213ENST00000571886 SFRP2Q96HF1 295 aa6.95□□□□□ -1.3
GTF3C1-213ENST00000571886 PRADC1Q9BSG0 188 aa6.95□□□□□ -1.3
GTF3C1-213ENST00000571886 VAX2Q9UIW0 290 aa6.95□□□□□ -1.3
GTF3C1-213ENST00000571886 PHLDA3Q9Y5J5 127 aa6.95□□□□□ -1.3
GTF3C1-213ENST00000571886 DNAH11Q96DT5 4516 aa6.95□□□□□ -1.3
GTF3C1-213ENST00000571886 TMEM218A2RU14 115 aa6.94□□□□□ -1.3
GTF3C1-213ENST00000571886 GAGE12JA6NER3 117 aa6.94□□□□□ -1.3
GTF3C1-213ENST00000571886 LINC00694P0DN24 101 aa6.94□□□□□ -1.3
GTF3C1-213ENST00000571886 GZMBP10144 247 aa6.94□□□□□ -1.3
GTF3C1-213ENST00000571886 SSTP61278 116 aa6.94□□□□□ -1.3
GTF3C1-213ENST00000571886 GAGE1Q13065 139 aa6.94□□□□□ -1.3
GTF3C1-213ENST00000571886 GAGE4Q13068 117 aa6.94□□□□□ -1.3
GTF3C1-213ENST00000571886 GAGE5Q13069 117 aa6.94□□□□□ -1.3
GTF3C1-213ENST00000571886 GAGE13Q4V321 117 aa6.94□□□□□ -1.3
GTF3C1-213ENST00000571886 FAM74A4Q5TZK3 123 aa6.94□□□□□ -1.3
GTF3C1-213ENST00000571886 SYT8Q8NBV8 401 aa6.94□□□□□ -1.3
GTF3C1-213ENST00000571886 LYPD6BQ8NI32 183 aa6.94□□□□□ -1.3
GTF3C1-213ENST00000571886 SSBP4Q9BWG4 385 aaPredicted RBP6.94□□□□□ -1.3
GTF3C1-213ENST00000571886 C19orf71A6NCJ1 209 aa6.93□□□□□ -1.3
GTF3C1-213ENST00000571886 SNAI2O43623 268 aa6.93□□□□□ -1.3
GTF3C1-213ENST00000571886 PDE6DO43924 150 aa6.93□□□□□ -1.3
GTF3C1-213ENST00000571886 IFNA1P01562 189 aa6.93□□□□□ -1.3
GTF3C1-213ENST00000571886 CXCL1P09341 107 aa6.93□□□□□ -1.3
GTF3C1-213ENST00000571886 MED14OSP0DP75 135 aa6.93□□□□□ -1.3
GTF3C1-213ENST00000571886 TIRAPP58753 221 aa6.93□□□□□ -1.3
GTF3C1-213ENST00000571886 ZFP82Q8N141 532 aa6.93□□□□□ -1.3
GTF3C1-213ENST00000571886 ATP6V0E2Q8NHE4 81 aa6.93□□□□□ -1.3
GTF3C1-213ENST00000571886 RBFOX3A6NFN3 312 aa6.92□□□□□ -1.3
GTF3C1-213ENST00000571886 DNAH10OSP0CZ25 163 aa6.92□□□□□ -1.3
GTF3C1-213ENST00000571886 BTF3P20290 206 aaKnown RBP6.92□□□□□ -1.3
GTF3C1-213ENST00000571886 SH2D6Q7Z4S9 175 aa6.92□□□□□ -1.3
GTF3C1-213ENST00000571886 Q8N3U1 123 aa6.92□□□□□ -1.3
GTF3C1-213ENST00000571886 CARHSP1Q9Y2V2 147 aaKnown RBP6.92□□□□□ -1.3
GTF3C1-213ENST00000571886 LY96Q9Y6Y9 160 aa6.92□□□□□ -1.3
GTF3C1-213ENST00000571886 IGHV3-38A0A0C4DH36 116 aa6.91□□□□□ -1.3
GTF3C1-213ENST00000571886 LOC105371267A0A1B0GV96 52 aa6.91□□□□□ -1.3
GTF3C1-213ENST00000571886 K7EN84 100 aa6.91□□□□□ -1.3
GTF3C1-213ENST00000571886 OR5AL1P0C617 328 aa6.91□□□□□ -1.3
GTF3C1-213ENST00000571886 FUSP35637 526 aaKnown RBP eCLIP6.91□□□□□ -1.3
GTF3C1-213ENST00000571886 GNG4P50150 75 aa6.91□□□□□ -1.3
GTF3C1-213ENST00000571886 LELP1Q5T871 98 aa6.91□□□□□ -1.3
GTF3C1-213ENST00000571886 SVBPQ8N300 66 aa6.91□□□□□ -1.3
GTF3C1-213ENST00000571886 OR2D3Q8NGH3 330 aa6.91□□□□□ -1.3
GTF3C1-213ENST00000571886 OCC1Q8TAD7 63 aa6.91□□□□□ -1.3
GTF3C1-213ENST00000571886 SEC11CQ9BY50 192 aa6.91□□□□□ -1.3
GTF3C1-213ENST00000571886 GTSF1LQ9H1H1 148 aa6.91□□□□□ -1.3
GTF3C1-213ENST00000571886 SMDT1Q9H4I9 107 aa6.91□□□□□ -1.3
GTF3C1-213ENST00000571886 MSRB1Q9NZV6 116 aa6.91□□□□□ -1.3
GTF3C1-213ENST00000571886 RHODO00212 210 aa6.9□□□□□ -1.3
GTF3C1-213ENST00000571886 SCO1O75880 301 aa6.9□□□□□ -1.3
GTF3C1-213ENST00000571886 IGHV3-30P01768 117 aa6.9□□□□□ -1.3
GTF3C1-213ENST00000571886 IGHV3-33P01772 117 aa6.9□□□□□ -1.3
GTF3C1-213ENST00000571886 APOC3P02656 99 aa6.9□□□□□ -1.3
GTF3C1-213ENST00000571886 IGLC6P0CF74 106 aa6.9□□□□□ -1.3
GTF3C1-213ENST00000571886 IGHV3-30-3P0DP02 117 aa6.9□□□□□ -1.3
GTF3C1-213ENST00000571886 IGHV3-30-5P0DP03 117 aa6.9□□□□□ -1.3
GTF3C1-213ENST00000571886 KRTAP10-2P60368 255 aa6.9□□□□□ -1.3
GTF3C1-213ENST00000571886 OR10J3Q5JRS4 329 aa6.9□□□□□ -1.3
GTF3C1-213ENST00000571886 SPANXN1Q5VSR9 72 aa6.9□□□□□ -1.3
GTF3C1-213ENST00000571886 NUDT10Q8NFP7 164 aa6.9□□□□□ -1.3
GTF3C1-213ENST00000571886 DAZAP1Q96EP5 407 aaKnown RBP6.9□□□□□ -1.3
GTF3C1-213ENST00000571886 NUDT11Q96G61 164 aa6.9□□□□□ -1.3
GTF3C1-213ENST00000571886 KIF25-AS1Q9Y6Z4 181 aa6.9□□□□□ -1.3
GTF3C1-213ENST00000571886 EVI2AP22794 236 aa6.89□□□□□ -1.31
GTF3C1-213ENST00000571886 TAGLN2P37802 199 aaKnown RBP6.89□□□□□ -1.31
GTF3C1-213ENST00000571886 LINC01556Q5JQF7 62 aa6.89□□□□□ -1.31
GTF3C1-213ENST00000571886 SPATA12Q7Z6I5 190 aa6.89□□□□□ -1.31
GTF3C1-213ENST00000571886 SMIM12Q96EX1 92 aa6.89□□□□□ -1.31
GTF3C1-213ENST00000571886 RNASE7Q9H1E1 156 aaKnown RBP6.89□□□□□ -1.31
GTF3C1-213ENST00000571886 RYR1P21817 5038 aa6.89□□□□□ -1.31
GTF3C1-213ENST00000571886 PCLOQ9Y6V0 5065 aa6.88□□□□□ -1.31
GTF3C1-213ENST00000571886 TRAV9-2A0A087WT02 112 aa6.88□□□□□ -1.31
GTF3C1-213ENST00000571886 TRAV8-6A0A0B4J262 113 aa6.88□□□□□ -1.31
GTF3C1-213ENST00000571886 K7EP13 123 aa6.88□□□□□ -1.31
GTF3C1-213ENST00000571886 SNAPINO95295 136 aa6.88□□□□□ -1.31
GTF3C1-213ENST00000571886 P01737 135 aa6.88□□□□□ -1.31
GTF3C1-213ENST00000571886 PEA15Q15121 130 aa6.88□□□□□ -1.31
GTF3C1-213ENST00000571886 LYZL1Q6UWQ5 148 aa6.88□□□□□ -1.31
GTF3C1-213ENST00000571886 FER1L6-AS1Q8NA97 138 aa6.88□□□□□ -1.31
GTF3C1-213ENST00000571886 NEXN-AS1Q8NBZ9 246 aa6.88□□□□□ -1.31
GTF3C1-213ENST00000571886 TPPP3Q9BW30 176 aa6.88□□□□□ -1.31
GTF3C1-213ENST00000571886 KRTAP17-1Q9BYP8 105 aa6.88□□□□□ -1.31
GTF3C1-213ENST00000571886 TMA7Q9Y2S6 64 aaKnown RBP6.88□□□□□ -1.31
GTF3C1-213ENST00000571886 C16orf90A8MZG2 172 aa6.87□□□□□ -1.31
GTF3C1-213ENST00000571886 IBA57-AS1B1ANH7 110 aa6.87□□□□□ -1.31
GTF3C1-213ENST00000571886 CEBPGP53567 150 aa6.87□□□□□ -1.31
GTF3C1-213ENST00000571886 RPS20P60866 119 aaKnown RBP6.87□□□□□ -1.31
GTF3C1-213ENST00000571886 RAB4BP61018 213 aa6.87□□□□□ -1.31
GTF3C1-213ENST00000571886 UBE2D3P61077 147 aa6.87□□□□□ -1.31
GTF3C1-213ENST00000571886 UBE2D2P62837 147 aa6.87□□□□□ -1.31
GTF3C1-213ENST00000571886 ZNF56Q15929 161 aa6.87□□□□□ -1.31
GTF3C1-213ENST00000571886 TRBV7-3A0A075B6L6 115 aa6.86□□□□□ -1.31
GTF3C1-213ENST00000571886 TRBV10-1A0A0K0K1A3 114 aa6.86□□□□□ -1.31
GTF3C1-213ENST00000571886 C9JQL5 133 aa6.86□□□□□ -1.31
GTF3C1-213ENST00000571886 F8W036 122 aa6.86□□□□□ -1.31
GTF3C1-213ENST00000571886 TMEM250H0YL14 139 aa6.86□□□□□ -1.31
GTF3C1-213ENST00000571886 SRP19P09132 144 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms