RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 CTXND1A0A1B0GTU2 59 aa11.49□□□□□ -0.57
CIITA-206ENST00000571190 RHODO00212 210 aa11.49□□□□□ -0.57
CIITA-206ENST00000571190 SH2D1AO60880 128 aa11.49□□□□□ -0.57
CIITA-206ENST00000571190 SFRP2Q96HF1 295 aa11.49□□□□□ -0.57
CIITA-206ENST00000571190 KLK12Q9UKR0 248 aa11.49□□□□□ -0.57
CIITA-206ENST00000571190 A0A087WWL8 130 aa11.48□□□□□ -0.57
CIITA-206ENST00000571190 FAM74A4Q5TZK3 123 aa11.48□□□□□ -0.57
CIITA-206ENST00000571190 OR11H4Q8NGC9 324 aa11.48□□□□□ -0.57
CIITA-206ENST00000571190 DEFB104AQ8WTQ1 72 aa11.48□□□□□ -0.57
CIITA-206ENST00000571190 HIST1H2BAQ96A08 127 aa11.48□□□□□ -0.57
CIITA-206ENST00000571190 MED28Q9H204 178 aa11.48□□□□□ -0.57
CIITA-206ENST00000571190 IGKV2D-24A0A075B6R9 120 aa11.47□□□□□ -0.57
CIITA-206ENST00000571190 RBFOX3A6NFN3 312 aa11.47□□□□□ -0.57
CIITA-206ENST00000571190 Q8N976 141 aa11.47□□□□□ -0.57
CIITA-206ENST00000571190 SYT8Q8NBV8 401 aa11.47□□□□□ -0.57
CIITA-206ENST00000571190 ZFP30Q9Y2G7 519 aa11.47□□□□□ -0.57
CIITA-206ENST00000571190 GIPP09681 153 aaPredicted RBP11.46□□□□□ -0.57
CIITA-206ENST00000571190 ZNF674Q2M3X9 581 aa11.46□□□□□ -0.57
CIITA-206ENST00000571190 ATRAIDQ6UW56 229 aa11.46□□□□□ -0.57
CIITA-206ENST00000571190 UBE2WQ96B02 151 aa11.46□□□□□ -0.57
CIITA-206ENST00000571190 RMI2Q96E14 147 aa11.46□□□□□ -0.57
CIITA-206ENST00000571190 CHAC1Q9BUX1 264 aa11.46□□□□□ -0.57
CIITA-206ENST00000571190 LINC01559Q495D7 138 aa11.45□□□□□ -0.58
CIITA-206ENST00000571190 FAM162BQ5T6X4 162 aa11.45□□□□□ -0.58
CIITA-206ENST00000571190 INO80EQ8NBZ0 244 aaPredicted RBP11.45□□□□□ -0.58
CIITA-206ENST00000571190 CIRBP-AS1Q8TBR5 109 aa11.45□□□□□ -0.58
CIITA-206ENST00000571190 NKX6-2Q9C056 277 aaPredicted RBP11.45□□□□□ -0.58
CIITA-206ENST00000571190 URGCP-MRPS24S4R325 110 aa11.45□□□□□ -0.58
CIITA-206ENST00000571190 FXYD6-FXYD2A0A087WZ82 144 aa11.44□□□□□ -0.58
CIITA-206ENST00000571190 TMSB15BA0A087X1C1 80 aa11.44□□□□□ -0.58
CIITA-206ENST00000571190 BORCS7-ASMTA0A0B4J1R7 106 aa11.44□□□□□ -0.58
CIITA-206ENST00000571190 M0R381 172 aa11.44□□□□□ -0.58
CIITA-206ENST00000571190 UBE2D3P61077 147 aa11.44□□□□□ -0.58
CIITA-206ENST00000571190 UBE2D2P62837 147 aa11.44□□□□□ -0.58
CIITA-206ENST00000571190 CHCHD7Q9BUK0 85 aa11.44□□□□□ -0.58
CIITA-206ENST00000571190 PHLDA3Q9Y5J5 127 aa11.44□□□□□ -0.58
CIITA-206ENST00000571190 LRP1Q07954 4544 aaKnown RBP11.43□□□□□ -0.58
CIITA-206ENST00000571190 TRBV10-1A0A0K0K1A3 114 aa11.43□□□□□ -0.58
CIITA-206ENST00000571190 TRBV6-1A0A0K0K1D8 114 aa11.43□□□□□ -0.58
CIITA-206ENST00000571190 G3V3Q6 166 aa11.43□□□□□ -0.58
CIITA-206ENST00000571190 PTTG1O95997 202 aa11.43□□□□□ -0.58
CIITA-206ENST00000571190 LTAP01374 205 aa11.43□□□□□ -0.58
CIITA-206ENST00000571190 TPT1P13693 172 aaKnown RBP11.43□□□□□ -0.58
CIITA-206ENST00000571190 FMC1Q96HJ9 113 aa11.43□□□□□ -0.58
CIITA-206ENST00000571190 A0A087WX48 190 aa11.42□□□□□ -0.58
CIITA-206ENST00000571190 SEC11BP0C7V7 166 aa11.42□□□□□ -0.58
CIITA-206ENST00000571190 ENHOQ6UWT2 76 aa11.42□□□□□ -0.58
CIITA-206ENST00000571190 CYTL1Q9NRR1 136 aa11.42□□□□□ -0.58
CIITA-206ENST00000571190 TRBV7-3A0A075B6L6 115 aa11.41□□□□□ -0.58
CIITA-206ENST00000571190 MAP1LC3B2A6NCE7 125 aa11.41□□□□□ -0.58
CIITA-206ENST00000571190 UBE2G1P62253 170 aa11.41□□□□□ -0.58
CIITA-206ENST00000571190 RPL36AP83881 106 aaKnown RBP11.41□□□□□ -0.58
CIITA-206ENST00000571190 AKR1C8PQ5T2L2 129 aa11.41□□□□□ -0.58
CIITA-206ENST00000571190 ZFP82Q8N141 532 aa11.41□□□□□ -0.58
CIITA-206ENST00000571190 OR10G8Q8NGN5 311 aa11.41□□□□□ -0.58
CIITA-206ENST00000571190 RPL36ALQ969Q0 106 aaKnown RBP11.41□□□□□ -0.58
CIITA-206ENST00000571190 MAP1LC3BQ9GZQ8 125 aa11.41□□□□□ -0.58
CIITA-206ENST00000571190 TRBV6-8A0A0A6YYG3 113 aa11.4□□□□□ -0.58
CIITA-206ENST00000571190 FHITP49789 147 aa11.4□□□□□ -0.58
CIITA-206ENST00000571190 ELOBQ15370 118 aa11.4□□□□□ -0.58
CIITA-206ENST00000571190 Q0VG73 95 aa11.39□□□□□ -0.59
CIITA-206ENST00000571190 PRR27Q6MZM9 219 aa11.39□□□□□ -0.59
CIITA-206ENST00000571190 NEXN-AS1Q8NBZ9 246 aa11.39□□□□□ -0.59
CIITA-206ENST00000571190 HMCN2Q8NDA2 5059 aa11.39□□□□□ -0.59
CIITA-206ENST00000571190 RPL19P84098 196 aaKnown RBP11.38□□□□□ -0.59
CIITA-206ENST00000571190 MPV17L2Q567V2 206 aa11.38□□□□□ -0.59
CIITA-206ENST00000571190 OR10AG1Q8NH19 301 aa11.38□□□□□ -0.59
CIITA-206ENST00000571190 TCEAL7Q9BRU2 100 aa11.38□□□□□ -0.59
CIITA-206ENST00000571190 TMEM262E9PQX1 116 aa11.37□□□□□ -0.59
CIITA-206ENST00000571190 IGLV2-8P01709 118 aa11.37□□□□□ -0.59
CIITA-206ENST00000571190 RAB4BP61018 213 aa11.37□□□□□ -0.59
CIITA-206ENST00000571190 CST9LP1Q5W188 147 aa11.37□□□□□ -0.59
CIITA-206ENST00000571190 C15orf54Q8N8G6 183 aa11.37□□□□□ -0.59
CIITA-206ENST00000571190 C1orf43Q9BWL3 253 aa11.37□□□□□ -0.59
CIITA-206ENST00000571190 PAGE4O60829 102 aa11.36□□□□□ -0.59
CIITA-206ENST00000571190 AKR1C3P42330 323 aa11.36□□□□□ -0.59
CIITA-206ENST00000571190 KCNIP4Q6PIL6 250 aa11.36□□□□□ -0.59
CIITA-206ENST00000571190 NTM-AS1Q6ZSK4 140 aa11.36□□□□□ -0.59
CIITA-206ENST00000571190 FAT3Q8TDW7 4589 aa11.36□□□□□ -0.59
CIITA-206ENST00000571190 OXTP01178 125 aa11.35□□□□□ -0.59
CIITA-206ENST00000571190 MLST8Q9BVC4 326 aa11.35□□□□□ -0.59
CIITA-206ENST00000571190 SSBP4Q9BWG4 385 aaPredicted RBP11.35□□□□□ -0.59
CIITA-206ENST00000571190 MUC21A0A0G2JKD1 596 aa11.34□□□□□ -0.59
CIITA-206ENST00000571190 MUC21A0A140T8X8 626 aa11.34□□□□□ -0.59
CIITA-206ENST00000571190 USP17L23D6RBM5 183 aa11.34□□□□□ -0.59
CIITA-206ENST00000571190 ARPC5O15511 151 aa11.34□□□□□ -0.59
CIITA-206ENST00000571190 SNAI2O43623 268 aa11.34□□□□□ -0.59
CIITA-206ENST00000571190 CXCL1P09341 107 aa11.34□□□□□ -0.59
CIITA-206ENST00000571190 C14orf177Q52M58 125 aa11.34□□□□□ -0.59
CIITA-206ENST00000571190 KRTAP26-1Q6PEX3 210 aa11.34□□□□□ -0.59
CIITA-206ENST00000571190 SCO2A0A1W2PP80 73 aa11.33□□□□□ -0.6
CIITA-206ENST00000571190 ANGP03950 147 aaKnown RBP11.33□□□□□ -0.6
CIITA-206ENST00000571190 PRSS1P07477 247 aa11.33□□□□□ -0.6
CIITA-206ENST00000571190 HNRNPA3P51991 378 aaKnown RBP11.33□□□□□ -0.6
CIITA-206ENST00000571190 ZNF56Q15929 161 aa11.33□□□□□ -0.6
CIITA-206ENST00000571190 SERTAD4-AS1Q5TG53 156 aa11.33□□□□□ -0.6
CIITA-206ENST00000571190 STOML3Q8TAV4 291 aa11.33□□□□□ -0.6
CIITA-206ENST00000571190 CRPP02741 224 aa11.32□□□□□ -0.6
CIITA-206ENST00000571190 MBD3L1Q8WWY6 194 aa11.32□□□□□ -0.6
CIITA-206ENST00000571190 CHCHD5Q9BSY4 110 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms