RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 LTAP01374 205 aa13.76□□□□□ -0.21
LITAF-205ENST00000570904 SMR3BP02814 79 aaPredicted RBP13.76□□□□□ -0.21
LITAF-205ENST00000570904 LINC01559Q495D7 138 aa13.76□□□□□ -0.21
LITAF-205ENST00000570904 FRZBQ92765 325 aa13.76□□□□□ -0.21
LITAF-205ENST00000570904 PHLDA3Q9Y5J5 127 aa13.76□□□□□ -0.21
LITAF-205ENST00000570904 TRBV6-1A0A0K0K1D8 114 aa13.75□□□□□ -0.21
LITAF-205ENST00000570904 M0R381 172 aa13.75□□□□□ -0.21
LITAF-205ENST00000570904 PAGE4O60829 102 aa13.75□□□□□ -0.21
LITAF-205ENST00000570904 TPT1P13693 172 aaKnown RBP13.75□□□□□ -0.21
LITAF-205ENST00000570904 WFDC2Q14508 124 aa13.75□□□□□ -0.21
LITAF-205ENST00000570904 DAZ4Q86SG3 579 aaKnown RBP13.75□□□□□ -0.21
LITAF-205ENST00000570904 TCEAL7Q9BRU2 100 aa13.75□□□□□ -0.21
LITAF-205ENST00000570904 DAZ3Q9NR90 486 aaKnown RBP13.75□□□□□ -0.21
LITAF-205ENST00000570904 MYCBP2O75592 4640 aa13.75□□□□□ -0.21
LITAF-205ENST00000570904 A0A1B0GV50 99 aa13.74□□□□□ -0.21
LITAF-205ENST00000570904 INAFM2P0DMQ5 153 aa13.74□□□□□ -0.21
LITAF-205ENST00000570904 KCNRGQ8N5I3 272 aa13.74□□□□□ -0.21
LITAF-205ENST00000570904 FAM213BQ8TBF2 198 aa13.74□□□□□ -0.21
LITAF-205ENST00000570904 SFRP2Q96HF1 295 aa13.74□□□□□ -0.21
LITAF-205ENST00000570904 TM2D2Q9BX73 214 aa13.74□□□□□ -0.21
LITAF-205ENST00000570904 A0A087WWC5 75 aa13.72□□□□□ -0.21
LITAF-205ENST00000570904 ZNF345Q14585 488 aa13.72□□□□□ -0.21
LITAF-205ENST00000570904 ZFP82Q8N141 532 aa13.72□□□□□ -0.21
LITAF-205ENST00000570904 SFT2D1Q8WV19 159 aa13.72□□□□□ -0.21
LITAF-205ENST00000570904 TMEM70Q9BUB7 260 aa13.72□□□□□ -0.21
LITAF-205ENST00000570904 TRAV8-3A0A0A6YYJ7 113 aa13.71□□□□□ -0.21
LITAF-205ENST00000570904 SCO2A0A1W2PP80 73 aa13.71□□□□□ -0.21
LITAF-205ENST00000570904 LECT2O14960 151 aa13.71□□□□□ -0.21
LITAF-205ENST00000570904 SEC11BP0C7V7 166 aa13.7□□□□□ -0.22
LITAF-205ENST00000570904 RPL19P84098 196 aaKnown RBP13.7□□□□□ -0.22
LITAF-205ENST00000570904 MBD3L1Q8WWY6 194 aa13.7□□□□□ -0.22
LITAF-205ENST00000570904 ZNF471Q9BX82 626 aaPredicted RBP13.7□□□□□ -0.22
LITAF-205ENST00000570904 TOR2AQ5JU69 321 aa13.69□□□□□ -0.22
LITAF-205ENST00000570904 FAM30AQ9NZY2 134 aa13.69□□□□□ -0.22
LITAF-205ENST00000570904 UMAD1C9J7I0 102 aa13.68□□□□□ -0.22
LITAF-205ENST00000570904 NIT1Q86X76 327 aa13.68□□□□□ -0.22
LITAF-205ENST00000570904 DNAJC30Q96LL9 226 aa13.68□□□□□ -0.22
LITAF-205ENST00000570904 URGCP-MRPS24S4R325 110 aa13.68□□□□□ -0.22
LITAF-205ENST00000570904 SRRM2Q9UQ35 2752 aaKnown RBP13.68□□□□□ -0.22
LITAF-205ENST00000570904 KANTRA0A1W2PQU2 76 aa13.67□□□□□ -0.22
LITAF-205ENST00000570904 HMSDA8MTL9 139 aa13.67□□□□□ -0.22
LITAF-205ENST00000570904 BCL2L11O43521 198 aa13.67□□□□□ -0.22
LITAF-205ENST00000570904 PFDN1O60925 122 aa13.67□□□□□ -0.22
LITAF-205ENST00000570904 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.66□□□□□ -0.22
LITAF-205ENST00000570904 TRBV10-1A0A0K0K1A3 114 aa13.66□□□□□ -0.22
LITAF-205ENST00000570904 S100A9P06702 114 aaKnown RBP13.66□□□□□ -0.22
LITAF-205ENST00000570904 RPL36AP83881 106 aaKnown RBP13.66□□□□□ -0.22
LITAF-205ENST00000570904 BAGE2Q86Y30 109 aa13.66□□□□□ -0.22
LITAF-205ENST00000570904 OR10AG1Q8NH19 301 aa13.66□□□□□ -0.22
LITAF-205ENST00000570904 BAALCQ8WXS3 180 aa13.66□□□□□ -0.22
LITAF-205ENST00000570904 RPL36ALQ969Q0 106 aaKnown RBP13.66□□□□□ -0.22
LITAF-205ENST00000570904 KLK12Q9UKR0 248 aa13.66□□□□□ -0.22
LITAF-205ENST00000570904 A0A0D9SG52 128 aa13.65□□□□□ -0.22
LITAF-205ENST00000570904 UBE2D3P61077 147 aa13.65□□□□□ -0.22
LITAF-205ENST00000570904 UBE2D2P62837 147 aa13.65□□□□□ -0.22
LITAF-205ENST00000570904 MLST8Q9BVC4 326 aa13.65□□□□□ -0.22
LITAF-205ENST00000570904 DMBT1Q9UGM3 2413 aaPredicted RBP13.64□□□□□ -0.23
LITAF-205ENST00000570904 IGKV2D-24A0A075B6R9 120 aa13.64□□□□□ -0.23
LITAF-205ENST00000570904 MUC21A0A0G2JKD1 596 aa13.64□□□□□ -0.23
LITAF-205ENST00000570904 MUC21A0A140T8X8 626 aa13.64□□□□□ -0.23
LITAF-205ENST00000570904 FAM229AH3BQW9 127 aa13.64□□□□□ -0.23
LITAF-205ENST00000570904 H2AFB1P0C5Y9 115 aa13.64□□□□□ -0.23
LITAF-205ENST00000570904 PRR27Q6MZM9 219 aa13.64□□□□□ -0.23
LITAF-205ENST00000570904 FLG2Q5D862 2391 aaPredicted RBP13.64□□□□□ -0.23
LITAF-205ENST00000570904 TRBV7-3A0A075B6L6 115 aa13.63□□□□□ -0.23
LITAF-205ENST00000570904 A0A087WX48 190 aa13.63□□□□□ -0.23
LITAF-205ENST00000570904 CXCL1P09341 107 aa13.63□□□□□ -0.23
LITAF-205ENST00000570904 ZNF56Q15929 161 aa13.63□□□□□ -0.23
LITAF-205ENST00000570904 UBE2WQ96B02 151 aa13.63□□□□□ -0.23
LITAF-205ENST00000570904 RMI2Q96E14 147 aa13.63□□□□□ -0.23
LITAF-205ENST00000570904 COX11Q9Y6N1 276 aa13.63□□□□□ -0.23
LITAF-205ENST00000570904 NEXN-AS1Q8NBZ9 246 aa13.62□□□□□ -0.23
LITAF-205ENST00000570904 OR10G8Q8NGN5 311 aa13.62□□□□□ -0.23
LITAF-205ENST00000570904 SNAI2O43623 268 aa13.61□□□□□ -0.23
LITAF-205ENST00000570904 C1QBP02746 253 aa13.61□□□□□ -0.23
LITAF-205ENST00000570904 RAB4BP61018 213 aa13.61□□□□□ -0.23
LITAF-205ENST00000570904 KCNIP4Q6PIL6 250 aa13.61□□□□□ -0.23
LITAF-205ENST00000570904 CHCHD7Q9BUK0 85 aa13.61□□□□□ -0.23
LITAF-205ENST00000570904 RPL35P42766 123 aaKnown RBP13.6□□□□□ -0.23
LITAF-205ENST00000570904 SSTP61278 116 aa13.6□□□□□ -0.23
LITAF-205ENST00000570904 EIF5AP63241 154 aaKnown RBP13.6□□□□□ -0.23
LITAF-205ENST00000570904 CCL20P78556 96 aa13.6□□□□□ -0.23
LITAF-205ENST00000570904 LINC01620Q4KN68 170 aa13.6□□□□□ -0.23
LITAF-205ENST00000570904 SPANXN1Q5VSR9 72 aa13.6□□□□□ -0.23
LITAF-205ENST00000570904 TMUB2Q71RG4 321 aa13.6□□□□□ -0.23
LITAF-205ENST00000570904 SSBP4Q9BWG4 385 aaPredicted RBP13.6□□□□□ -0.23
LITAF-205ENST00000570904 OR5AL1P0C617 328 aa13.59□□□□□ -0.23
LITAF-205ENST00000570904 Q6ZSA8 131 aa13.59□□□□□ -0.23
LITAF-205ENST00000570904 DERL1Q9BUN8 251 aa13.59□□□□□ -0.23
LITAF-205ENST00000570904 GNG13Q9P2W3 67 aa13.59□□□□□ -0.23
LITAF-205ENST00000570904 TRBV6-8A0A0A6YYG3 113 aa13.58□□□□□ -0.24
LITAF-205ENST00000570904 TMEM262E9PQX1 116 aa13.58□□□□□ -0.24
LITAF-205ENST00000570904 ELOBQ15370 118 aa13.58□□□□□ -0.24
LITAF-205ENST00000570904 Q8N976 141 aa13.57□□□□□ -0.24
LITAF-205ENST00000570904 MANBALQ9NQG1 85 aa13.57□□□□□ -0.24
LITAF-205ENST00000570904 RBFOX3A6NFN3 312 aa13.56□□□□□ -0.24
LITAF-205ENST00000570904 F5H697 171 aa13.56□□□□□ -0.24
LITAF-205ENST00000570904 MPV17L2Q567V2 206 aa13.56□□□□□ -0.24
LITAF-205ENST00000570904 C11orf52Q96A22 123 aa13.56□□□□□ -0.24
LITAF-205ENST00000570904 CENPWQ5EE01 88 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms