RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 NIT1Q86X76 327 aa5.65□□□□□ -1.5
CTDNEP1-203ENST00000570385 ZC2HC1AQ96GY0 325 aa5.65□□□□□ -1.5
CTDNEP1-203ENST00000570385 MED28Q9H204 178 aa5.65□□□□□ -1.5
CTDNEP1-203ENST00000570385 IL36BQ9NZH7 164 aa5.65□□□□□ -1.5
CTDNEP1-203ENST00000570385 TNFSF18Q9UNG2 199 aa5.65□□□□□ -1.5
CTDNEP1-203ENST00000570385 SYT8Q8NBV8 401 aa5.64□□□□□ -1.51
CTDNEP1-203ENST00000570385 OR11H4Q8NGC9 324 aa5.64□□□□□ -1.51
CTDNEP1-203ENST00000570385 DEFB104AQ8WTQ1 72 aa5.64□□□□□ -1.51
CTDNEP1-203ENST00000570385 PHLDA3Q9Y5J5 127 aa5.64□□□□□ -1.51
CTDNEP1-203ENST00000570385 A0A087WX48 190 aa5.63□□□□□ -1.51
CTDNEP1-203ENST00000570385 FXYD6-FXYD2A0A087WZ82 144 aa5.63□□□□□ -1.51
CTDNEP1-203ENST00000570385 CTXND1A0A1B0GTU2 59 aa5.63□□□□□ -1.51
CTDNEP1-203ENST00000570385 RNF222A6NCQ9 220 aa5.63□□□□□ -1.51
CTDNEP1-203ENST00000570385 FAM74A7A6NL05 159 aa5.63□□□□□ -1.51
CTDNEP1-203ENST00000570385 KRTAP29-1A8MX34 341 aaPredicted RBP5.63□□□□□ -1.51
CTDNEP1-203ENST00000570385 TMEM262E9PQX1 116 aa5.63□□□□□ -1.51
CTDNEP1-203ENST00000570385 RHODO00212 210 aa5.63□□□□□ -1.51
CTDNEP1-203ENST00000570385 PIK3CD-AS1Q5SR53 167 aa5.63□□□□□ -1.51
CTDNEP1-203ENST00000570385 Q8N976 141 aa5.63□□□□□ -1.51
CTDNEP1-203ENST00000570385 INO80EQ8NBZ0 244 aaPredicted RBP5.63□□□□□ -1.51
CTDNEP1-203ENST00000570385 RMI2Q96E14 147 aa5.63□□□□□ -1.51
CTDNEP1-203ENST00000570385 COX11Q9Y6N1 276 aa5.63□□□□□ -1.51
CTDNEP1-203ENST00000570385 BORCS7-ASMTA0A0B4J1R7 106 aa5.62□□□□□ -1.51
CTDNEP1-203ENST00000570385 IGLV2-8P01709 118 aa5.62□□□□□ -1.51
CTDNEP1-203ENST00000570385 TPT1P13693 172 aaKnown RBP5.62□□□□□ -1.51
CTDNEP1-203ENST00000570385 SSTP61278 116 aa5.62□□□□□ -1.51
CTDNEP1-203ENST00000570385 AKR1C8PQ5T2L2 129 aa5.62□□□□□ -1.51
CTDNEP1-203ENST00000570385 FAM162BQ5T6X4 162 aa5.62□□□□□ -1.51
CTDNEP1-203ENST00000570385 CST9LP1Q5W188 147 aa5.62□□□□□ -1.51
CTDNEP1-203ENST00000570385 CIRBP-AS1Q8TBR5 109 aa5.62□□□□□ -1.51
CTDNEP1-203ENST00000570385 HIST1H2BAQ96A08 127 aa5.62□□□□□ -1.51
CTDNEP1-203ENST00000570385 SFRP2Q96HF1 295 aa5.62□□□□□ -1.51
CTDNEP1-203ENST00000570385 CHAC1Q9BUX1 264 aa5.62□□□□□ -1.51
CTDNEP1-203ENST00000570385 LRP1Q07954 4544 aaKnown RBP5.62□□□□□ -1.51
CTDNEP1-203ENST00000570385 MUC21A0A0G2JKD1 596 aa5.61□□□□□ -1.51
CTDNEP1-203ENST00000570385 MUC21A0A140T8X8 626 aa5.61□□□□□ -1.51
CTDNEP1-203ENST00000570385 UBE2G1P62253 170 aa5.61□□□□□ -1.51
CTDNEP1-203ENST00000570385 RPL36AP83881 106 aaKnown RBP5.61□□□□□ -1.51
CTDNEP1-203ENST00000570385 RPL19P84098 196 aaKnown RBP5.61□□□□□ -1.51
CTDNEP1-203ENST00000570385 DNLZQ5SXM8 178 aa5.61□□□□□ -1.51
CTDNEP1-203ENST00000570385 KCNIP4Q6PIL6 250 aa5.61□□□□□ -1.51
CTDNEP1-203ENST00000570385 C15orf54Q8N8G6 183 aa5.61□□□□□ -1.51
CTDNEP1-203ENST00000570385 RPL36ALQ969Q0 106 aaKnown RBP5.61□□□□□ -1.51
CTDNEP1-203ENST00000570385 ZFP30Q9Y2G7 519 aa5.61□□□□□ -1.51
CTDNEP1-203ENST00000570385 TRBV7-3A0A075B6L6 115 aa5.6□□□□□ -1.51
CTDNEP1-203ENST00000570385 A0A1B0GV50 99 aa5.6□□□□□ -1.51
CTDNEP1-203ENST00000570385 MAP1LC3B2A6NCE7 125 aa5.6□□□□□ -1.51
CTDNEP1-203ENST00000570385 HLA-DQA1P01909 254 aa5.6□□□□□ -1.51
CTDNEP1-203ENST00000570385 GIPP09681 153 aaPredicted RBP5.6□□□□□ -1.51
CTDNEP1-203ENST00000570385 SEC11BP0C7V7 166 aa5.6□□□□□ -1.51
CTDNEP1-203ENST00000570385 FHITP49789 147 aa5.6□□□□□ -1.51
CTDNEP1-203ENST00000570385 KRTAP10-4P60372 401 aaPredicted RBP5.6□□□□□ -1.51
CTDNEP1-203ENST00000570385 UBE2D3P61077 147 aa5.6□□□□□ -1.51
CTDNEP1-203ENST00000570385 UBE2D2P62837 147 aa5.6□□□□□ -1.51
CTDNEP1-203ENST00000570385 ELOBQ15370 118 aa5.6□□□□□ -1.51
CTDNEP1-203ENST00000570385 ZNF56Q15929 161 aa5.6□□□□□ -1.51
CTDNEP1-203ENST00000570385 ZNF674Q2M3X9 581 aa5.6□□□□□ -1.51
CTDNEP1-203ENST00000570385 LINC01559Q495D7 138 aa5.6□□□□□ -1.51
CTDNEP1-203ENST00000570385 ENHOQ6UWT2 76 aa5.6□□□□□ -1.51
CTDNEP1-203ENST00000570385 ZFP82Q8N141 532 aa5.6□□□□□ -1.51
CTDNEP1-203ENST00000570385 FMC1Q96HJ9 113 aa5.6□□□□□ -1.51
CTDNEP1-203ENST00000570385 C1orf43Q9BWL3 253 aa5.6□□□□□ -1.51
CTDNEP1-203ENST00000570385 MAP1LC3BQ9GZQ8 125 aa5.6□□□□□ -1.51
CTDNEP1-203ENST00000570385 TRBV6-8A0A0A6YYG3 113 aa5.59□□□□□ -1.51
CTDNEP1-203ENST00000570385 TRBV10-1A0A0K0K1A3 114 aa5.59□□□□□ -1.51
CTDNEP1-203ENST00000570385 ARPC5O15511 151 aa5.59□□□□□ -1.51
CTDNEP1-203ENST00000570385 PTTG1O95997 202 aa5.59□□□□□ -1.51
CTDNEP1-203ENST00000570385 LTAP01374 205 aa5.59□□□□□ -1.51
CTDNEP1-203ENST00000570385 CRPP02741 224 aa5.59□□□□□ -1.51
CTDNEP1-203ENST00000570385 ANGP03950 147 aaKnown RBP5.59□□□□□ -1.51
CTDNEP1-203ENST00000570385 AKR1C3P42330 323 aa5.59□□□□□ -1.51
CTDNEP1-203ENST00000570385 MPV17L2Q567V2 206 aa5.59□□□□□ -1.51
CTDNEP1-203ENST00000570385 CLPSL2Q6UWE3 100 aa5.59□□□□□ -1.51
CTDNEP1-203ENST00000570385 COX8CQ7Z4L0 72 aa5.59□□□□□ -1.51
CTDNEP1-203ENST00000570385 NEXN-AS1Q8NBZ9 246 aa5.59□□□□□ -1.51
CTDNEP1-203ENST00000570385 OR10AG1Q8NH19 301 aa5.59□□□□□ -1.51
CTDNEP1-203ENST00000570385 CHCHD5Q9BSY4 110 aa5.59□□□□□ -1.51
CTDNEP1-203ENST00000570385 NKX6-2Q9C056 277 aaPredicted RBP5.59□□□□□ -1.51
CTDNEP1-203ENST00000570385 USP17L23D6RBM5 183 aa5.58□□□□□ -1.52
CTDNEP1-203ENST00000570385 F5H697 171 aa5.58□□□□□ -1.52
CTDNEP1-203ENST00000570385 SMLR1H3BR10 107 aa5.58□□□□□ -1.52
CTDNEP1-203ENST00000570385 PAGE4O60829 102 aa5.58□□□□□ -1.52
CTDNEP1-203ENST00000570385 Q0VG73 95 aa5.58□□□□□ -1.52
CTDNEP1-203ENST00000570385 ATRAIDQ6UW56 229 aa5.58□□□□□ -1.52
CTDNEP1-203ENST00000570385 STOML3Q8TAV4 291 aa5.58□□□□□ -1.52
CTDNEP1-203ENST00000570385 CYTL1Q9NRR1 136 aa5.58□□□□□ -1.52
CTDNEP1-203ENST00000570385 SCO2A0A1W2PP80 73 aa5.57□□□□□ -1.52
CTDNEP1-203ENST00000570385 G3V3Q6 166 aa5.57□□□□□ -1.52
CTDNEP1-203ENST00000570385 PRSS1P07477 247 aa5.57□□□□□ -1.52
CTDNEP1-203ENST00000570385 HNRNPA3P51991 378 aaKnown RBP5.57□□□□□ -1.52
CTDNEP1-203ENST00000570385 RAB4BP61018 213 aa5.57□□□□□ -1.52
CTDNEP1-203ENST00000570385 GAGE6Q13070 117 aa5.57□□□□□ -1.52
CTDNEP1-203ENST00000570385 C14orf177Q52M58 125 aa5.57□□□□□ -1.52
CTDNEP1-203ENST00000570385 PRR27Q6MZM9 219 aa5.57□□□□□ -1.52
CTDNEP1-203ENST00000570385 OR10G8Q8NGN5 311 aa5.57□□□□□ -1.52
CTDNEP1-203ENST00000570385 CHCHD7Q9BUK0 85 aa5.57□□□□□ -1.52
CTDNEP1-203ENST00000570385 ZNF471Q9BX82 626 aaPredicted RBP5.57□□□□□ -1.52
CTDNEP1-203ENST00000570385 TRBV6-1A0A0K0K1D8 114 aa5.56□□□□□ -1.52
CTDNEP1-203ENST00000570385 RPL37AP61513 92 aaKnown RBP5.56□□□□□ -1.52
CTDNEP1-203ENST00000570385 SERTAD4-AS1Q5TG53 156 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms