RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 LYRM2Q9NU23 88 aaPredicted RBP6.49□□□□□ -1.37
CTDNEP1-202ENST00000570380 UBE2D3P61077 147 aa6.48□□□□□ -1.37
CTDNEP1-202ENST00000570380 UBE2D2P62837 147 aa6.48□□□□□ -1.37
CTDNEP1-202ENST00000570380 HBG1P69891 147 aa6.48□□□□□ -1.37
CTDNEP1-202ENST00000570380 HBG2P69892 147 aa6.48□□□□□ -1.37
CTDNEP1-202ENST00000570380 IL15RAQ13261 267 aa6.48□□□□□ -1.37
CTDNEP1-202ENST00000570380 CLPSL2Q6UWE3 100 aa6.48□□□□□ -1.37
CTDNEP1-202ENST00000570380 STX12Q86Y82 276 aa6.48□□□□□ -1.37
CTDNEP1-202ENST00000570380 PRR34Q9NV39 138 aa6.48□□□□□ -1.37
CTDNEP1-202ENST00000570380 A0A087WWL8 130 aa6.47□□□□□ -1.37
CTDNEP1-202ENST00000570380 TRBV6-8A0A0A6YYG3 113 aa6.47□□□□□ -1.37
CTDNEP1-202ENST00000570380 EIF3GO75821 320 aaKnown RBP eCLIP6.47□□□□□ -1.37
CTDNEP1-202ENST00000570380 GCGP01275 180 aa6.47□□□□□ -1.37
CTDNEP1-202ENST00000570380 S100A10P60903 97 aa6.47□□□□□ -1.37
CTDNEP1-202ENST00000570380 GNG5P63218 68 aa6.47□□□□□ -1.37
CTDNEP1-202ENST00000570380 RAB32Q13637 225 aa6.47□□□□□ -1.37
CTDNEP1-202ENST00000570380 RGS21Q2M5E4 152 aa6.47□□□□□ -1.37
CTDNEP1-202ENST00000570380 LYPD6BQ8NI32 183 aa6.47□□□□□ -1.37
CTDNEP1-202ENST00000570380 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.46□□□□□ -1.38
CTDNEP1-202ENST00000570380 RHODO00212 210 aa6.46□□□□□ -1.38
CTDNEP1-202ENST00000570380 PVALBP20472 110 aaPredicted RBP6.46□□□□□ -1.38
CTDNEP1-202ENST00000570380 H2BFSP57053 126 aa6.46□□□□□ -1.38
CTDNEP1-202ENST00000570380 COX6A2Q02221 97 aa6.46□□□□□ -1.38
CTDNEP1-202ENST00000570380 FAM74A1Q5RGS3 127 aa6.46□□□□□ -1.38
CTDNEP1-202ENST00000570380 FAM74A4Q5TZK3 123 aa6.46□□□□□ -1.38
CTDNEP1-202ENST00000570380 ARL6IP6Q8N6S5 226 aa6.46□□□□□ -1.38
CTDNEP1-202ENST00000570380 NDFIP1Q9BT67 221 aa6.46□□□□□ -1.38
CTDNEP1-202ENST00000570380 AP5S1Q9NUS5 200 aa6.46□□□□□ -1.38
CTDNEP1-202ENST00000570380 MBD2Q9UBB5 411 aa6.46□□□□□ -1.38
CTDNEP1-202ENST00000570380 VAX2Q9UIW0 290 aa6.46□□□□□ -1.38
CTDNEP1-202ENST00000570380 ALG5Q9Y673 324 aa6.46□□□□□ -1.38
CTDNEP1-202ENST00000570380 TRBV7-3A0A075B6L6 115 aa6.45□□□□□ -1.38
CTDNEP1-202ENST00000570380 IGKV3D-20A0A0C4DH25 116 aa6.45□□□□□ -1.38
CTDNEP1-202ENST00000570380 H0YIZ8 118 aa6.45□□□□□ -1.38
CTDNEP1-202ENST00000570380 H7C1H1 209 aa6.45□□□□□ -1.38
CTDNEP1-202ENST00000570380 PTTG1O95997 202 aa6.45□□□□□ -1.38
CTDNEP1-202ENST00000570380 RPL36AP83881 106 aaKnown RBP6.45□□□□□ -1.38
CTDNEP1-202ENST00000570380 NHLH2Q02577 135 aa6.45□□□□□ -1.38
CTDNEP1-202ENST00000570380 MAJINQ3KP22 176 aa6.45□□□□□ -1.38
CTDNEP1-202ENST00000570380 KHDC3LQ587J8 217 aa6.45□□□□□ -1.38
CTDNEP1-202ENST00000570380 LINC00269Q8N2A0 174 aa6.45□□□□□ -1.38
CTDNEP1-202ENST00000570380 STPG4Q8N801 248 aa6.45□□□□□ -1.38
CTDNEP1-202ENST00000570380 RPL36ALQ969Q0 106 aaKnown RBP6.45□□□□□ -1.38
CTDNEP1-202ENST00000570380 OR5AC2Q9NZP5 309 aa6.45□□□□□ -1.38
CTDNEP1-202ENST00000570380 IGLV10-54A0A075B6I4 117 aa6.44□□□□□ -1.38
CTDNEP1-202ENST00000570380 IGKV2-24A0A0C4DH68 120 aa6.44□□□□□ -1.38
CTDNEP1-202ENST00000570380 TRBV10-1A0A0K0K1A3 114 aa6.44□□□□□ -1.38
CTDNEP1-202ENST00000570380 SSNA1O43805 119 aa6.44□□□□□ -1.38
CTDNEP1-202ENST00000570380 S100A4P26447 101 aaKnown RBP6.44□□□□□ -1.38
CTDNEP1-202ENST00000570380 LRRC37A5PQ49AS3 106 aa6.44□□□□□ -1.38
CTDNEP1-202ENST00000570380 OR5C1Q8NGR4 320 aa6.44□□□□□ -1.38
CTDNEP1-202ENST00000570380 CHCHD5Q9BSY4 110 aa6.44□□□□□ -1.38
CTDNEP1-202ENST00000570380 WDR61Q9GZS3 305 aaKnown RBP6.44□□□□□ -1.38
CTDNEP1-202ENST00000570380 IL36BQ9NZH7 164 aa6.44□□□□□ -1.38
CTDNEP1-202ENST00000570380 H3BVH4 76 aa6.43□□□□□ -1.38
CTDNEP1-202ENST00000570380 TAS2R45P59539 299 aa6.43□□□□□ -1.38
CTDNEP1-202ENST00000570380 RBX1P62877 108 aa6.43□□□□□ -1.38
CTDNEP1-202ENST00000570380 SMUG1Q53HV7 270 aa6.43□□□□□ -1.38
CTDNEP1-202ENST00000570380 OR10G8Q8NGN5 311 aa6.43□□□□□ -1.38
CTDNEP1-202ENST00000570380 PRSS3P2Q8NHM4 247 aa6.43□□□□□ -1.38
CTDNEP1-202ENST00000570380 KCNIP2Q9NS61 270 aa6.43□□□□□ -1.38
CTDNEP1-202ENST00000570380 PSG8Q9UQ74 426 aa6.43□□□□□ -1.38
CTDNEP1-202ENST00000570380 FSIP2Q5CZC0 6907 aa6.42□□□□□ -1.38
CTDNEP1-202ENST00000570380 FAM231BA6NCW3 169 aa6.42□□□□□ -1.38
CTDNEP1-202ENST00000570380 NDUFS6O75380 124 aaKnown RBP6.42□□□□□ -1.38
CTDNEP1-202ENST00000570380 PKIAP61925 76 aa6.42□□□□□ -1.38
CTDNEP1-202ENST00000570380 NTM-AS1Q6ZSK4 140 aa6.42□□□□□ -1.38
CTDNEP1-202ENST00000570380 PPP1R1CQ8WVI7 109 aa6.42□□□□□ -1.38
CTDNEP1-202ENST00000570380 SFRP2Q96HF1 295 aa6.42□□□□□ -1.38
CTDNEP1-202ENST00000570380 KRTAP3-3Q9BYR6 98 aa6.42□□□□□ -1.38
CTDNEP1-202ENST00000570380 KRTAP3-2Q9BYR7 98 aa6.42□□□□□ -1.38
CTDNEP1-202ENST00000570380 MPC2O95563 127 aa6.41□□□□□ -1.38
CTDNEP1-202ENST00000570380 TCRAP04437 139 aa6.41□□□□□ -1.38
CTDNEP1-202ENST00000570380 ARMS2P0C7Q2 107 aa6.41□□□□□ -1.38
CTDNEP1-202ENST00000570380 REG3AQ06141 175 aa6.41□□□□□ -1.38
CTDNEP1-202ENST00000570380 GAGE6Q13070 117 aa6.41□□□□□ -1.38
CTDNEP1-202ENST00000570380 ZFP69Q49AA0 526 aa6.41□□□□□ -1.38
CTDNEP1-202ENST00000570380 Q6ZRP5 223 aa6.41□□□□□ -1.38
CTDNEP1-202ENST00000570380 PRNTQ86SH4 94 aa6.41□□□□□ -1.38
CTDNEP1-202ENST00000570380 NEXN-AS1Q8NBZ9 246 aa6.41□□□□□ -1.38
CTDNEP1-202ENST00000570380 OR11H4Q8NGC9 324 aa6.41□□□□□ -1.38
CTDNEP1-202ENST00000570380 SERTM2A0A1B0GWG4 89 aa6.4□□□□□ -1.38
CTDNEP1-202ENST00000570380 C17orf112F2Z3M2 114 aa6.4□□□□□ -1.38
CTDNEP1-202ENST00000570380 PFDN1O60925 122 aa6.4□□□□□ -1.38
CTDNEP1-202ENST00000570380 RAB5CP51148 216 aa6.4□□□□□ -1.38
CTDNEP1-202ENST00000570380 CYCSP99999 105 aaKnown RBP6.4□□□□□ -1.38
CTDNEP1-202ENST00000570380 FLI1Q01543 452 aaPredicted RBP6.4□□□□□ -1.38
CTDNEP1-202ENST00000570380 A0A096LNI7 61 aa6.39□□□□□ -1.39
CTDNEP1-202ENST00000570380 IFNA7P01567 189 aa6.39□□□□□ -1.39
CTDNEP1-202ENST00000570380 RPS10P46783 165 aaKnown RBP6.39□□□□□ -1.39
CTDNEP1-202ENST00000570380 DNLZQ5SXM8 178 aa6.39□□□□□ -1.39
CTDNEP1-202ENST00000570380 PQLC2Q6ZP29 291 aa6.39□□□□□ -1.39
CTDNEP1-202ENST00000570380 ZNF664Q8N3J9 261 aa6.39□□□□□ -1.39
CTDNEP1-202ENST00000570380 C15orf56Q8N910 161 aa6.39□□□□□ -1.39
CTDNEP1-202ENST00000570380 MED28Q9H204 178 aa6.39□□□□□ -1.39
CTDNEP1-202ENST00000570380 PSORS1C2Q9UIG4 136 aa6.39□□□□□ -1.39
CTDNEP1-202ENST00000570380 TRAV8-4A0A0B4J246 113 aa6.38□□□□□ -1.39
CTDNEP1-202ENST00000570380 TRAV26-2A0A0B4J265 109 aa6.38□□□□□ -1.39
CTDNEP1-202ENST00000570380 FABP5P3A8MUU1 101 aa6.38□□□□□ -1.39
CTDNEP1-202ENST00000570380 B4DEV8 164 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms