RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 TRAV34A0A0B4J273 112 aa13.81□□□□□ -0.2
PKD1-240ENST00000570253 CRPP02741 224 aa13.81□□□□□ -0.2
PKD1-240ENST00000570253 TPT1P13693 172 aaKnown RBP13.81□□□□□ -0.2
PKD1-240ENST00000570253 IFITM3Q01628 133 aa13.81□□□□□ -0.2
PKD1-240ENST00000570253 UFSP1Q6NVU6 142 aa13.81□□□□□ -0.2
PKD1-240ENST00000570253 C1orf43Q9BWL3 253 aa13.81□□□□□ -0.2
PKD1-240ENST00000570253 NKX6-2Q9C056 277 aaPredicted RBP13.81□□□□□ -0.2
PKD1-240ENST00000570253 IGLV2-8P01709 118 aa13.8□□□□□ -0.2
PKD1-240ENST00000570253 ARMS2P0C7Q2 107 aa13.8□□□□□ -0.2
PKD1-240ENST00000570253 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.8□□□□□ -0.2
PKD1-240ENST00000570253 CIRBP-AS1Q8TBR5 109 aa13.8□□□□□ -0.2
PKD1-240ENST00000570253 TRBV10-1A0A0K0K1A3 114 aa13.79□□□□□ -0.2
PKD1-240ENST00000570253 TMEM262E9PQX1 116 aa13.79□□□□□ -0.2
PKD1-240ENST00000570253 M0R036 132 aa13.79□□□□□ -0.2
PKD1-240ENST00000570253 PEX7O00628 323 aa13.79□□□□□ -0.2
PKD1-240ENST00000570253 Q86TA4 180 aa13.79□□□□□ -0.2
PKD1-240ENST00000570253 HIST1H2BAQ96A08 127 aa13.79□□□□□ -0.2
PKD1-240ENST00000570253 AQP10Q96PS8 301 aa13.79□□□□□ -0.2
PKD1-240ENST00000570253 A0A087WWL8 130 aa13.78□□□□□ -0.2
PKD1-240ENST00000570253 UBE2G1P62253 170 aa13.78□□□□□ -0.2
PKD1-240ENST00000570253 DNLZQ5SXM8 178 aa13.78□□□□□ -0.2
PKD1-240ENST00000570253 SFRP2Q96HF1 295 aa13.78□□□□□ -0.2
PKD1-240ENST00000570253 Q9UF83 564 aa13.78□□□□□ -0.2
PKD1-240ENST00000570253 ZFP30Q9Y2G7 519 aa13.78□□□□□ -0.2
PKD1-240ENST00000570253 KRBOX1C9JBD0 128 aa13.77□□□□□ -0.21
PKD1-240ENST00000570253 M0R381 172 aa13.77□□□□□ -0.21
PKD1-240ENST00000570253 UBE2G2P60604 165 aa13.77□□□□□ -0.21
PKD1-240ENST00000570253 FAM162BQ5T6X4 162 aa13.77□□□□□ -0.21
PKD1-240ENST00000570253 ZFP82Q8N141 532 aa13.77□□□□□ -0.21
PKD1-240ENST00000570253 BORCS7-ASMTA0A0B4J1R7 106 aa13.76□□□□□ -0.21
PKD1-240ENST00000570253 CTXND1A0A1B0GTU2 59 aa13.76□□□□□ -0.21
PKD1-240ENST00000570253 GRIFINA4D1Z8 144 aa13.76□□□□□ -0.21
PKD1-240ENST00000570253 PKIAP61925 76 aa13.76□□□□□ -0.21
PKD1-240ENST00000570253 ATRAIDQ6UW56 229 aa13.76□□□□□ -0.21
PKD1-240ENST00000570253 TRBV7-3A0A075B6L6 115 aa13.75□□□□□ -0.21
PKD1-240ENST00000570253 SH2D1AO60880 128 aa13.75□□□□□ -0.21
PKD1-240ENST00000570253 INO80EQ8NBZ0 244 aaPredicted RBP13.75□□□□□ -0.21
PKD1-240ENST00000570253 FMC1Q96HJ9 113 aa13.75□□□□□ -0.21
PKD1-240ENST00000570253 PLA2G2DQ9UNK4 145 aa13.75□□□□□ -0.21
PKD1-240ENST00000570253 RPL37AP61513 92 aaKnown RBP13.74□□□□□ -0.21
PKD1-240ENST00000570253 ZC2HC1AQ96GY0 325 aa13.74□□□□□ -0.21
PKD1-240ENST00000570253 DNAJC30Q96LL9 226 aa13.74□□□□□ -0.21
PKD1-240ENST00000570253 UBE2D3P61077 147 aa13.73□□□□□ -0.21
PKD1-240ENST00000570253 UBE2D2P62837 147 aa13.73□□□□□ -0.21
PKD1-240ENST00000570253 TMSB15BA0A087X1C1 80 aa13.72□□□□□ -0.21
PKD1-240ENST00000570253 AKR1C8PQ5T2L2 129 aa13.72□□□□□ -0.21
PKD1-240ENST00000570253 C15orf54Q8N8G6 183 aa13.72□□□□□ -0.21
PKD1-240ENST00000570253 MED28Q9H204 178 aa13.72□□□□□ -0.21
PKD1-240ENST00000570253 ALG5Q9Y673 324 aa13.72□□□□□ -0.21
PKD1-240ENST00000570253 TRBV6-8A0A0A6YYG3 113 aa13.71□□□□□ -0.21
PKD1-240ENST00000570253 A6NHS1 94 aa13.71□□□□□ -0.21
PKD1-240ENST00000570253 FAM74A7A6NL05 159 aa13.71□□□□□ -0.21
PKD1-240ENST00000570253 HLA-DQA1P01909 254 aa13.71□□□□□ -0.21
PKD1-240ENST00000570253 ANGP03950 147 aaKnown RBP13.71□□□□□ -0.21
PKD1-240ENST00000570253 ZNF56Q15929 161 aa13.71□□□□□ -0.21
PKD1-240ENST00000570253 LINC01559Q495D7 138 aa13.71□□□□□ -0.21
PKD1-240ENST00000570253 COX8CQ7Z4L0 72 aa13.71□□□□□ -0.21
PKD1-240ENST00000570253 CRIP1P50238 77 aa13.7□□□□□ -0.22
PKD1-240ENST00000570253 KRTAP10-4P60372 401 aaPredicted RBP13.7□□□□□ -0.22
PKD1-240ENST00000570253 TCEAL7Q9BRU2 100 aa13.7□□□□□ -0.22
PKD1-240ENST00000570253 CHCHD5Q9BSY4 110 aa13.7□□□□□ -0.22
PKD1-240ENST00000570253 RAB4BP61018 213 aa13.69□□□□□ -0.22
PKD1-240ENST00000570253 MIAQ16674 131 aa13.69□□□□□ -0.22
PKD1-240ENST00000570253 TMEM97Q5BJF2 176 aa13.69□□□□□ -0.22
PKD1-240ENST00000570253 RPL7L1Q6DKI1 246 aaKnown RBP13.69□□□□□ -0.22
PKD1-240ENST00000570253 OR10G8Q8NGN5 311 aa13.69□□□□□ -0.22
PKD1-240ENST00000570253 ZNF674Q2M3X9 581 aa13.68□□□□□ -0.22
PKD1-240ENST00000570253 DGAT2L7PQ6IED9 249 aa13.68□□□□□ -0.22
PKD1-240ENST00000570253 HMCN2Q8NDA2 5059 aa13.68□□□□□ -0.22
PKD1-240ENST00000570253 USP17L23D6RBM5 183 aa13.67□□□□□ -0.22
PKD1-240ENST00000570253 PTTG1O95997 202 aa13.67□□□□□ -0.22
PKD1-240ENST00000570253 AKR1C3P42330 323 aa13.67□□□□□ -0.22
PKD1-240ENST00000570253 ZNF726P1Q15940 193 aa13.67□□□□□ -0.22
PKD1-240ENST00000570253 ENHOQ6UWT2 76 aa13.67□□□□□ -0.22
PKD1-240ENST00000570253 STOML3Q8TAV4 291 aa13.67□□□□□ -0.22
PKD1-240ENST00000570253 LRP1Q07954 4544 aaKnown RBP13.67□□□□□ -0.22
PKD1-240ENST00000570253 TRBV6-1A0A0K0K1D8 114 aa13.66□□□□□ -0.22
PKD1-240ENST00000570253 MPV17L2Q567V2 206 aa13.66□□□□□ -0.22
PKD1-240ENST00000570253 CST9LP1Q5W188 147 aa13.66□□□□□ -0.22
PKD1-240ENST00000570253 ZNF471Q9BX82 626 aaPredicted RBP13.66□□□□□ -0.22
PKD1-240ENST00000570253 FXYD6-FXYD2A0A087WZ82 144 aa13.65□□□□□ -0.22
PKD1-240ENST00000570253 MAP1LC3B2A6NCE7 125 aa13.65□□□□□ -0.22
PKD1-240ENST00000570253 LTAP01374 205 aa13.65□□□□□ -0.22
PKD1-240ENST00000570253 MAP1LC3BQ9GZQ8 125 aa13.65□□□□□ -0.22
PKD1-240ENST00000570253 F5H697 171 aa13.64□□□□□ -0.23
PKD1-240ENST00000570253 GIPP09681 153 aaPredicted RBP13.64□□□□□ -0.23
PKD1-240ENST00000570253 FHITP49789 147 aa13.64□□□□□ -0.23
PKD1-240ENST00000570253 NEXN-AS1Q8NBZ9 246 aa13.64□□□□□ -0.23
PKD1-240ENST00000570253 FAT3Q8TDW7 4589 aa13.64□□□□□ -0.23
PKD1-240ENST00000570253 SMIM17P0DL12 118 aa13.63□□□□□ -0.23
PKD1-240ENST00000570253 RPL19P84098 196 aaKnown RBP13.63□□□□□ -0.23
PKD1-240ENST00000570253 SPANXN1Q5VSR9 72 aa13.63□□□□□ -0.23
PKD1-240ENST00000570253 A0A0D9SG52 128 aa13.62□□□□□ -0.23
PKD1-240ENST00000570253 S100A9P06702 114 aaKnown RBP13.62□□□□□ -0.23
PKD1-240ENST00000570253 C9orf163Q8N9P6 203 aa13.62□□□□□ -0.23
PKD1-240ENST00000570253 PRSS1P07477 247 aa13.61□□□□□ -0.23
PKD1-240ENST00000570253 CXCL1P09341 107 aa13.61□□□□□ -0.23
PKD1-240ENST00000570253 TRBV25-1A0A075B6N4 114 aa13.6□□□□□ -0.23
PKD1-240ENST00000570253 PRR27Q6MZM9 219 aa13.6□□□□□ -0.23
PKD1-240ENST00000570253 CLRN3Q8NCR9 226 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 190.5 ms