RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 ZC2HC1AQ96GY0 325 aa7.8□□□□□ -1.16
CAPN3-220ENST00000569827 IL36BQ9NZH7 164 aa7.8□□□□□ -1.16
CAPN3-220ENST00000569827 USP17L23D6RBM5 183 aa7.79□□□□□ -1.16
CAPN3-220ENST00000569827 TMEM262E9PQX1 116 aa7.79□□□□□ -1.16
CAPN3-220ENST00000569827 M0R381 172 aa7.79□□□□□ -1.16
CAPN3-220ENST00000569827 SH2D1AO60880 128 aa7.79□□□□□ -1.16
CAPN3-220ENST00000569827 CRIP1P50238 77 aa7.79□□□□□ -1.16
CAPN3-220ENST00000569827 DEFA3P59666 94 aa7.79□□□□□ -1.16
CAPN3-220ENST00000569827 MPV17L2Q567V2 206 aa7.79□□□□□ -1.16
CAPN3-220ENST00000569827 ENHOQ6UWT2 76 aa7.79□□□□□ -1.16
CAPN3-220ENST00000569827 Q86TA4 180 aa7.79□□□□□ -1.16
CAPN3-220ENST00000569827 OR11H4Q8NGC9 324 aa7.79□□□□□ -1.16
CAPN3-220ENST00000569827 C1orf43Q9BWL3 253 aa7.79□□□□□ -1.16
CAPN3-220ENST00000569827 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.79□□□□□ -1.16
CAPN3-220ENST00000569827 FABP5P3A8MUU1 101 aa7.78□□□□□ -1.16
CAPN3-220ENST00000569827 KRBOX1C9JBD0 128 aa7.78□□□□□ -1.16
CAPN3-220ENST00000569827 PRSS1P07477 247 aa7.78□□□□□ -1.16
CAPN3-220ENST00000569827 MT1HL1P0DM35 61 aa7.78□□□□□ -1.16
CAPN3-220ENST00000569827 SAPCD1Q5SSQ6 148 aa7.78□□□□□ -1.16
CAPN3-220ENST00000569827 ATRAIDQ6UW56 229 aa7.78□□□□□ -1.16
CAPN3-220ENST00000569827 RHODO00212 210 aa7.77□□□□□ -1.17
CAPN3-220ENST00000569827 CXorf1O96002 111 aa7.77□□□□□ -1.17
CAPN3-220ENST00000569827 IFNA7P01567 189 aa7.77□□□□□ -1.17
CAPN3-220ENST00000569827 CRPP02741 224 aa7.77□□□□□ -1.17
CAPN3-220ENST00000569827 UBE2D3P61077 147 aa7.77□□□□□ -1.17
CAPN3-220ENST00000569827 UBE2D2P62837 147 aa7.77□□□□□ -1.17
CAPN3-220ENST00000569827 ZNF726P1Q15940 193 aa7.77□□□□□ -1.17
CAPN3-220ENST00000569827 KCNIP4Q6PIL6 250 aa7.77□□□□□ -1.17
CAPN3-220ENST00000569827 S100ZQ8WXG8 99 aa7.77□□□□□ -1.17
CAPN3-220ENST00000569827 MARVELD1Q9BSK0 173 aa7.77□□□□□ -1.17
CAPN3-220ENST00000569827 TMEM167BQ9NRX6 74 aa7.77□□□□□ -1.17
CAPN3-220ENST00000569827 PHLDA3Q9Y5J5 127 aa7.77□□□□□ -1.17
CAPN3-220ENST00000569827 PEX7O00628 323 aa7.76□□□□□ -1.17
CAPN3-220ENST00000569827 ANGP03950 147 aaKnown RBP7.76□□□□□ -1.17
CAPN3-220ENST00000569827 ODF1Q14990 250 aa7.76□□□□□ -1.17
CAPN3-220ENST00000569827 SFRP2Q96HF1 295 aa7.76□□□□□ -1.17
CAPN3-220ENST00000569827 ACTR3CQ9C0K3 210 aaPredicted RBP7.76□□□□□ -1.17
CAPN3-220ENST00000569827 SEC11BP0C7V7 166 aa7.75□□□□□ -1.17
CAPN3-220ENST00000569827 TPT1P13693 172 aaKnown RBP7.75□□□□□ -1.17
CAPN3-220ENST00000569827 RPL36AP83881 106 aaKnown RBP7.75□□□□□ -1.17
CAPN3-220ENST00000569827 Q0VG73 95 aa7.75□□□□□ -1.17
CAPN3-220ENST00000569827 ELOBQ15370 118 aa7.75□□□□□ -1.17
CAPN3-220ENST00000569827 C14orf177Q52M58 125 aa7.75□□□□□ -1.17
CAPN3-220ENST00000569827 PIK3CD-AS1Q5SR53 167 aa7.75□□□□□ -1.17
CAPN3-220ENST00000569827 NEXN-AS1Q8NBZ9 246 aa7.75□□□□□ -1.17
CAPN3-220ENST00000569827 RPL36ALQ969Q0 106 aaKnown RBP7.75□□□□□ -1.17
CAPN3-220ENST00000569827 PSMG3Q9BT73 122 aaPredicted RBP7.75□□□□□ -1.17
CAPN3-220ENST00000569827 TRBV7-3A0A075B6L6 115 aa7.74□□□□□ -1.17
CAPN3-220ENST00000569827 TRBV6-8A0A0A6YYG3 113 aa7.74□□□□□ -1.17
CAPN3-220ENST00000569827 MUC21A0A0G2JKD1 596 aa7.74□□□□□ -1.17
CAPN3-220ENST00000569827 MUC21A0A140T8X8 626 aa7.74□□□□□ -1.17
CAPN3-220ENST00000569827 A0A1W2PRE2 83 aa7.74□□□□□ -1.17
CAPN3-220ENST00000569827 PTTG1O95997 202 aa7.74□□□□□ -1.17
CAPN3-220ENST00000569827 RPL19P84098 196 aaKnown RBP7.74□□□□□ -1.17
CAPN3-220ENST00000569827 ZNF56Q15929 161 aa7.74□□□□□ -1.17
CAPN3-220ENST00000569827 Q5BKY6 102 aa7.74□□□□□ -1.17
CAPN3-220ENST00000569827 CHCHD5Q9BSY4 110 aa7.74□□□□□ -1.17
CAPN3-220ENST00000569827 CHCHD7Q9BUK0 85 aa7.74□□□□□ -1.17
CAPN3-220ENST00000569827 NDUFA13Q9P0J0 144 aa7.74□□□□□ -1.17
CAPN3-220ENST00000569827 FAM74A7A6NL05 159 aa7.73□□□□□ -1.17
CAPN3-220ENST00000569827 SSTP61278 116 aa7.73□□□□□ -1.17
CAPN3-220ENST00000569827 DNLZQ5SXM8 178 aa7.73□□□□□ -1.17
CAPN3-220ENST00000569827 FAM162BQ5T6X4 162 aa7.73□□□□□ -1.17
CAPN3-220ENST00000569827 ZFP82Q8N141 532 aa7.73□□□□□ -1.17
CAPN3-220ENST00000569827 ALG5Q9Y673 324 aa7.73□□□□□ -1.17
CAPN3-220ENST00000569827 IGLV10-54A0A075B6I4 117 aa7.72□□□□□ -1.17
CAPN3-220ENST00000569827 MBP02144 154 aa7.72□□□□□ -1.17
CAPN3-220ENST00000569827 CHTF8P0CG12 524 aa7.72□□□□□ -1.17
CAPN3-220ENST00000569827 GAGE6Q13070 117 aa7.72□□□□□ -1.17
CAPN3-220ENST00000569827 RPL7L1Q6DKI1 246 aaKnown RBP7.72□□□□□ -1.17
CAPN3-220ENST00000569827 C9orf163Q8N9P6 203 aa7.72□□□□□ -1.17
CAPN3-220ENST00000569827 OR10AG1Q8NH19 301 aa7.72□□□□□ -1.17
CAPN3-220ENST00000569827 TRBV10-1A0A0K0K1A3 114 aa7.71□□□□□ -1.18
CAPN3-220ENST00000569827 CTXND1A0A1B0GTU2 59 aa7.71□□□□□ -1.18
CAPN3-220ENST00000569827 SERF2P84101 59 aa7.71□□□□□ -1.18
CAPN3-220ENST00000569827 LINC01559Q495D7 138 aa7.71□□□□□ -1.18
CAPN3-220ENST00000569827 KRTAP26-1Q6PEX3 210 aa7.71□□□□□ -1.18
CAPN3-220ENST00000569827 NTM-AS1Q6ZSK4 140 aa7.71□□□□□ -1.18
CAPN3-220ENST00000569827 AQP10Q96PS8 301 aa7.71□□□□□ -1.18
CAPN3-220ENST00000569827 TNFSF18Q9UNG2 199 aa7.71□□□□□ -1.18
CAPN3-220ENST00000569827 UBE2G1P62253 170 aa7.7□□□□□ -1.18
CAPN3-220ENST00000569827 ZNF674Q2M3X9 581 aa7.7□□□□□ -1.18
CAPN3-220ENST00000569827 LINC00299Q6ZSB3 139 aa7.7□□□□□ -1.18
CAPN3-220ENST00000569827 LINC00269Q8N2A0 174 aa7.7□□□□□ -1.18
CAPN3-220ENST00000569827 OR10G8Q8NGN5 311 aa7.7□□□□□ -1.18
CAPN3-220ENST00000569827 F5H697 171 aa7.69□□□□□ -1.18
CAPN3-220ENST00000569827 RBX1P62877 108 aa7.69□□□□□ -1.18
CAPN3-220ENST00000569827 MIAQ16674 131 aa7.69□□□□□ -1.18
CAPN3-220ENST00000569827 SDIM1Q6ZPB5 146 aa7.69□□□□□ -1.18
CAPN3-220ENST00000569827 HIST1H2BAQ96A08 127 aa7.69□□□□□ -1.18
CAPN3-220ENST00000569827 AKR1C3P42330 323 aa7.68□□□□□ -1.18
CAPN3-220ENST00000569827 RAB5CP51148 216 aa7.68□□□□□ -1.18
CAPN3-220ENST00000569827 DEFA1P59665 94 aa7.68□□□□□ -1.18
CAPN3-220ENST00000569827 RAB4BP61018 213 aa7.68□□□□□ -1.18
CAPN3-220ENST00000569827 CST9LP1Q5W188 147 aa7.68□□□□□ -1.18
CAPN3-220ENST00000569827 PRR27Q6MZM9 219 aa7.68□□□□□ -1.18
CAPN3-220ENST00000569827 FMC1Q96HJ9 113 aa7.68□□□□□ -1.18
CAPN3-220ENST00000569827 ZFP30Q9Y2G7 519 aa7.68□□□□□ -1.18
CAPN3-220ENST00000569827 FXYD6-FXYD2A0A087WZ82 144 aa7.67□□□□□ -1.18
CAPN3-220ENST00000569827 A0A1B0GV50 99 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms