RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 C14orf178Q8N769 122 aaPredicted RBP5.55□□□□□ -1.52
CDH13-214ENST00000569455 TMEM263Q8WUH6 116 aaKnown RBP5.55□□□□□ -1.52
CDH13-214ENST00000569455 TMEM18Q96B42 140 aa5.55□□□□□ -1.52
CDH13-214ENST00000569455 RNF185Q96GF1 192 aa5.55□□□□□ -1.52
CDH13-214ENST00000569455 NDUFAF3Q9BU61 184 aa5.55□□□□□ -1.52
CDH13-214ENST00000569455 GSN-AS1Q9NRJ2 163 aa5.55□□□□□ -1.52
CDH13-214ENST00000569455 A8MWV9 139 aa5.54□□□□□ -1.52
CDH13-214ENST00000569455 SPRY2O43597 315 aa5.54□□□□□ -1.52
CDH13-214ENST00000569455 SERF1AO75920 110 aa5.54□□□□□ -1.52
CDH13-214ENST00000569455 ESDP10768 282 aa5.54□□□□□ -1.52
CDH13-214ENST00000569455 AKR1D1P51857 326 aa5.54□□□□□ -1.52
CDH13-214ENST00000569455 IQCJQ1A5X6 159 aa5.54□□□□□ -1.52
CDH13-214ENST00000569455 RRN3P1Q2M238 152 aa5.54□□□□□ -1.52
CDH13-214ENST00000569455 PDZD11Q5EBL8 140 aa5.54□□□□□ -1.52
CDH13-214ENST00000569455 RNASEKQ6P5S7 137 aaKnown RBP5.54□□□□□ -1.52
CDH13-214ENST00000569455 ZNF705AQ6ZN79 300 aaPredicted RBP5.54□□□□□ -1.52
CDH13-214ENST00000569455 C11orf72Q8NBR9 251 aa5.54□□□□□ -1.52
CDH13-214ENST00000569455 CSNK1G2-AS1Q8NCQ2 148 aa5.54□□□□□ -1.52
CDH13-214ENST00000569455 CHCHD1Q96BP2 118 aaKnown RBP5.54□□□□□ -1.52
CDH13-214ENST00000569455 C16orf74Q96GX8 76 aa5.54□□□□□ -1.52
CDH13-214ENST00000569455 MAP1LC3AQ9H492 121 aa5.54□□□□□ -1.52
CDH13-214ENST00000569455 SMIM9A6NGZ8 99 aa5.53□□□□□ -1.52
CDH13-214ENST00000569455 F5H697 171 aa5.53□□□□□ -1.52
CDH13-214ENST00000569455 HSBP1O75506 76 aa5.53□□□□□ -1.52
CDH13-214ENST00000569455 TNFRSF6BO95407 300 aa5.53□□□□□ -1.52
CDH13-214ENST00000569455 NCR2O95944 276 aa5.53□□□□□ -1.52
CDH13-214ENST00000569455 FA2HQ7L5A8 372 aa5.53□□□□□ -1.52
CDH13-214ENST00000569455 NIT1Q86X76 327 aa5.53□□□□□ -1.52
CDH13-214ENST00000569455 POM121L12Q8N7R1 296 aa5.53□□□□□ -1.52
CDH13-214ENST00000569455 PRSS3P2Q8NHM4 247 aa5.53□□□□□ -1.52
CDH13-214ENST00000569455 RNASE8Q8TDE3 154 aaKnown RBP5.53□□□□□ -1.52
CDH13-214ENST00000569455 SAMD10Q9BYL1 202 aa5.53□□□□□ -1.52
CDH13-214ENST00000569455 KIF25-AS1Q9Y6Z4 181 aa5.53□□□□□ -1.52
CDH13-214ENST00000569455 A0A087WWL8 130 aa5.52□□□□□ -1.53
CDH13-214ENST00000569455 SMKR1H3BMG3 65 aa5.52□□□□□ -1.53
CDH13-214ENST00000569455 H7C1H1 209 aa5.52□□□□□ -1.53
CDH13-214ENST00000569455 RHODO00212 210 aa5.52□□□□□ -1.53
CDH13-214ENST00000569455 NPYP01303 97 aa5.52□□□□□ -1.53
CDH13-214ENST00000569455 LINC00614P0C842 121 aa5.52□□□□□ -1.53
CDH13-214ENST00000569455 IGHV4-30-4P0DP06 118 aa5.52□□□□□ -1.53
CDH13-214ENST00000569455 FABP4P15090 132 aa5.52□□□□□ -1.53
CDH13-214ENST00000569455 AZU1P20160 251 aa5.52□□□□□ -1.53
CDH13-214ENST00000569455 PMCHP20382 165 aa5.52□□□□□ -1.53
CDH13-214ENST00000569455 DAZ2Q13117 558 aaKnown RBP5.52□□□□□ -1.53
CDH13-214ENST00000569455 ZNF56Q15929 161 aa5.52□□□□□ -1.53
CDH13-214ENST00000569455 LGALS9BQ3B8N2 356 aa5.52□□□□□ -1.53
CDH13-214ENST00000569455 FAM74A4Q5TZK3 123 aa5.52□□□□□ -1.53
CDH13-214ENST00000569455 IL17DQ8TAD2 202 aa5.52□□□□□ -1.53
CDH13-214ENST00000569455 RASL10AQ92737 203 aa5.52□□□□□ -1.53
CDH13-214ENST00000569455 PACRGQ96M98 296 aaPredicted RBP5.52□□□□□ -1.53
CDH13-214ENST00000569455 HIST1H2BLQ99880 126 aa5.52□□□□□ -1.53
CDH13-214ENST00000569455 NXT2Q9NPJ8 142 aaKnown RBP5.52□□□□□ -1.53
CDH13-214ENST00000569455 TRGV1A0A0A0MS02 117 aa5.51□□□□□ -1.53
CDH13-214ENST00000569455 TRAV26-2A0A0B4J265 109 aa5.51□□□□□ -1.53
CDH13-214ENST00000569455 LOC389332A0A1B0GUA5 103 aa5.51□□□□□ -1.53
CDH13-214ENST00000569455 A8MZ25 164 aa5.51□□□□□ -1.53
CDH13-214ENST00000569455 NUPR1O60356 82 aa5.51□□□□□ -1.53
CDH13-214ENST00000569455 PRM2P04554 102 aa5.51□□□□□ -1.53
CDH13-214ENST00000569455 CRYGDP07320 174 aa5.51□□□□□ -1.53
CDH13-214ENST00000569455 AMTP48728 403 aa5.51□□□□□ -1.53
CDH13-214ENST00000569455 LINC00310P59036 64 aa5.51□□□□□ -1.53
CDH13-214ENST00000569455 LINC00315P59091 139 aa5.51□□□□□ -1.53
CDH13-214ENST00000569455 KRTAP10-11P60412 298 aa5.51□□□□□ -1.53
CDH13-214ENST00000569455 NRACQ8N912 160 aa5.51□□□□□ -1.53
CDH13-214ENST00000569455 C20orf78Q9BR46 151 aa5.51□□□□□ -1.53
CDH13-214ENST00000569455 JPT2Q9H910 190 aa5.51□□□□□ -1.53
CDH13-214ENST00000569455 AP5S1Q9NUS5 200 aa5.51□□□□□ -1.53
CDH13-214ENST00000569455 MRPL16Q9NX20 251 aaKnown RBP5.51□□□□□ -1.53
CDH13-214ENST00000569455 IFITM10A6NMD0 228 aa5.5□□□□□ -1.53
CDH13-214ENST00000569455 PRSS47A8MTI9 375 aa5.5□□□□□ -1.53
CDH13-214ENST00000569455 RS1O15537 224 aa5.5□□□□□ -1.53
CDH13-214ENST00000569455 CIDEAO60543 219 aa5.5□□□□□ -1.53
CDH13-214ENST00000569455 IFI27P40305 119 aaPredicted RBP5.5□□□□□ -1.53
CDH13-214ENST00000569455 SUMO2P61956 95 aaKnown RBP5.5□□□□□ -1.53
CDH13-214ENST00000569455 DEFB135Q30KP9 77 aa5.5□□□□□ -1.53
CDH13-214ENST00000569455 CFAP126Q5VTH2 177 aa5.5□□□□□ -1.53
CDH13-214ENST00000569455 SUMO4Q6EEV6 95 aa5.5□□□□□ -1.53
CDH13-214ENST00000569455 ZFP2Q6ZN57 461 aa5.5□□□□□ -1.53
CDH13-214ENST00000569455 Q6ZWC4 215 aa5.5□□□□□ -1.53
CDH13-214ENST00000569455 Q8N8P6 123 aa5.5□□□□□ -1.53
CDH13-214ENST00000569455 OR4C5Q8NGB2 326 aa5.5□□□□□ -1.53
CDH13-214ENST00000569455 OR10D4PQ8NGN7 298 aa5.5□□□□□ -1.53
CDH13-214ENST00000569455 OVOL2Q9BRP0 275 aa5.5□□□□□ -1.53
CDH13-214ENST00000569455 NOP10Q9NPE3 64 aaKnown RBP5.5□□□□□ -1.53
CDH13-214ENST00000569455 NACAE9PAV3 2078 aa5.5□□□□□ -1.53
CDH13-214ENST00000569455 TENM3Q9P273 2699 aa5.49□□□□□ -1.53
CDH13-214ENST00000569455 K7EMI3 77 aa5.49□□□□□ -1.53
CDH13-214ENST00000569455 GAS8-AS1O95177 125 aa5.49□□□□□ -1.53
CDH13-214ENST00000569455 GATA1P15976 413 aaPredicted RBP5.49□□□□□ -1.53
CDH13-214ENST00000569455 RPL32P62910 135 aaKnown RBP5.49□□□□□ -1.53
CDH13-214ENST00000569455 RNF183Q96D59 192 aa5.49□□□□□ -1.53
CDH13-214ENST00000569455 URB1-AS1Q96HZ7 61 aa5.49□□□□□ -1.53
CDH13-214ENST00000569455 SMIM2Q9BVW6 85 aa5.49□□□□□ -1.53
CDH13-214ENST00000569455 EDA2RQ9HAV5 297 aa5.49□□□□□ -1.53
CDH13-214ENST00000569455 ST20Q9HBF5 79 aa5.49□□□□□ -1.53
CDH13-214ENST00000569455 X6R8D5 127 aa5.49□□□□□ -1.53
CDH13-214ENST00000569455 COL7A1Q02388 2944 aa5.49□□□□□ -1.53
CDH13-214ENST00000569455 TRGV2A0A075B6R0 118 aa5.48□□□□□ -1.53
CDH13-214ENST00000569455 TRAV4A0A0B4J268 109 aa5.48□□□□□ -1.53
CDH13-214ENST00000569455 TRBV6-5A0A0K0K1A5 114 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms