RNA–Protein interactions for RNA: ENST00000568993.5

SNX20-204, Transcript of sorting nexin 20, humanhuman

TSL 1 (best)

Gene SNX20, Length 2,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-204ENST00000568993 DPH3P1Q9H4G8 78 aa11.48□□□□□ -0.57
SNX20-204ENST00000568993 K7ERU9 68 aa11.47□□□□□ -0.57
SNX20-204ENST00000568993 POM121L12Q8N7R1 296 aa11.47□□□□□ -0.57
SNX20-204ENST00000568993 NRACQ8N912 160 aa11.47□□□□□ -0.57
SNX20-204ENST00000568993 OR2K2Q8NGT1 345 aa11.47□□□□□ -0.57
SNX20-204ENST00000568993 TMEM70Q9BUB7 260 aa11.47□□□□□ -0.57
SNX20-204ENST00000568993 HSPB8Q9UJY1 196 aa11.47□□□□□ -0.57
SNX20-204ENST00000568993 HIVEP1P15822 2718 aa11.47□□□□□ -0.57
SNX20-204ENST00000568993 RBMY1BA6NDE4 496 aaKnown RBP11.47□□□□□ -0.57
SNX20-204ENST00000568993 RBMY1EA6NEQ0 496 aaKnown RBP11.47□□□□□ -0.57
SNX20-204ENST00000568993 RBMY1DP0C7P1 496 aaKnown RBP11.47□□□□□ -0.57
SNX20-204ENST00000568993 NXT2Q9NPJ8 142 aaKnown RBP11.47□□□□□ -0.57
SNX20-204ENST00000568993 A0A096LNJ9 63 aa11.46□□□□□ -0.57
SNX20-204ENST00000568993 GATA1P15976 413 aaPredicted RBP11.46□□□□□ -0.57
SNX20-204ENST00000568993 BATFQ16520 125 aa11.46□□□□□ -0.57
SNX20-204ENST00000568993 NDUFA11Q86Y39 141 aa11.46□□□□□ -0.57
SNX20-204ENST00000568993 AP1S3Q96PC3 154 aa11.46□□□□□ -0.57
SNX20-204ENST00000568993 SPRY2O43597 315 aa11.45□□□□□ -0.58
SNX20-204ENST00000568993 KRTAP10-3P60369 221 aa11.45□□□□□ -0.58
SNX20-204ENST00000568993 ODF3L2Q3SX64 289 aa11.45□□□□□ -0.58
SNX20-204ENST00000568993 LINC00173Q6ZV60 143 aa11.45□□□□□ -0.58
SNX20-204ENST00000568993 Q8N1Y9 231 aa11.45□□□□□ -0.58
SNX20-204ENST00000568993 KIF25-AS1Q9Y6Z4 181 aa11.45□□□□□ -0.58
SNX20-204ENST00000568993 PGPEP1Q9NXJ5 209 aa11.45□□□□□ -0.58
SNX20-204ENST00000568993 FN1P02751 2386 aaKnown RBP11.45□□□□□ -0.58
SNX20-204ENST00000568993 IGLV2-18A0A075B6J9 118 aa11.44□□□□□ -0.58
SNX20-204ENST00000568993 SYS1-DBNDD2H3BUS1 97 aa11.44□□□□□ -0.58
SNX20-204ENST00000568993 CRLF1O75462 422 aa11.44□□□□□ -0.58
SNX20-204ENST00000568993 CMC4P56277 68 aaPredicted RBP11.44□□□□□ -0.58
SNX20-204ENST00000568993 C14orf178Q8N769 122 aaPredicted RBP11.44□□□□□ -0.58
SNX20-204ENST00000568993 Q8N8P6 123 aa11.44□□□□□ -0.58
SNX20-204ENST00000568993 ZNF747Q9BV97 191 aa11.44□□□□□ -0.58
SNX20-204ENST00000568993 MDFICQ9P1T7 246 aa11.44□□□□□ -0.58
SNX20-204ENST00000568993 COX11Q9Y6N1 276 aa11.44□□□□□ -0.58
SNX20-204ENST00000568993 TRGV11A0A075B6L2 103 aa11.43□□□□□ -0.58
SNX20-204ENST00000568993 TRAV26-2A0A0B4J265 109 aa11.43□□□□□ -0.58
SNX20-204ENST00000568993 IGLV1-51P01701 117 aa11.43□□□□□ -0.58
SNX20-204ENST00000568993 RBMY1A1P0DJD3 496 aaKnown RBP11.43□□□□□ -0.58
SNX20-204ENST00000568993 RBMY1CP0DJD4 496 aa11.43□□□□□ -0.58
SNX20-204ENST00000568993 LINC00315P59091 139 aa11.43□□□□□ -0.58
SNX20-204ENST00000568993 RBMY1FQ15415 496 aaKnown RBP11.43□□□□□ -0.58
SNX20-204ENST00000568993 NSUN5P1Q3KNT7 163 aa11.43□□□□□ -0.58
SNX20-204ENST00000568993 VAMP8Q9BV40 100 aa11.43□□□□□ -0.58
SNX20-204ENST00000568993 CRYBA4P53673 196 aa11.43□□□□□ -0.58
SNX20-204ENST00000568993 PET117Q6UWS5 81 aa11.43□□□□□ -0.58
SNX20-204ENST00000568993 SPXQ9BT56 116 aa11.43□□□□□ -0.58
SNX20-204ENST00000568993 MAP1LC3CQ9BXW4 147 aa11.43□□□□□ -0.58
SNX20-204ENST00000568993 SAP30O75446 220 aa11.42□□□□□ -0.58
SNX20-204ENST00000568993 HBDP02042 147 aa11.42□□□□□ -0.58
SNX20-204ENST00000568993 FXYD7P58549 80 aa11.42□□□□□ -0.58
SNX20-204ENST00000568993 SPATA12Q7Z6I5 190 aa11.42□□□□□ -0.58
SNX20-204ENST00000568993 FAM110AQ9BQ89 295 aa11.42□□□□□ -0.58
SNX20-204ENST00000568993 LINC00467Q9BRT7 94 aa11.42□□□□□ -0.58
SNX20-204ENST00000568993 OR11H12B2RN74 326 aa11.42□□□□□ -0.58
SNX20-204ENST00000568993 H0Y8G0 127 aa11.42□□□□□ -0.58
SNX20-204ENST00000568993 RIPPLY3P57055 190 aa11.42□□□□□ -0.58
SNX20-204ENST00000568993 SYT8Q8NBV8 401 aa11.42□□□□□ -0.58
SNX20-204ENST00000568993 C2CD3Q4AC94 2353 aa11.41□□□□□ -0.58
SNX20-204ENST00000568993 PPP1R17O96001 155 aa11.41□□□□□ -0.58
SNX20-204ENST00000568993 STPG4Q8N801 248 aa11.41□□□□□ -0.58
SNX20-204ENST00000568993 RASL10AQ92737 203 aa11.41□□□□□ -0.58
SNX20-204ENST00000568993 C20orf78Q9BR46 151 aa11.41□□□□□ -0.58
SNX20-204ENST00000568993 SMIM17P0DL12 118 aa11.4□□□□□ -0.59
SNX20-204ENST00000568993 FCER1GP30273 86 aa11.4□□□□□ -0.59
SNX20-204ENST00000568993 BEAN1Q3B7T3 259 aa11.39□□□□□ -0.59
SNX20-204ENST00000568993 TRPT1Q86TN4 253 aaKnown RBP11.39□□□□□ -0.59
SNX20-204ENST00000568993 PAM16Q9Y3D7 125 aa11.39□□□□□ -0.59
SNX20-204ENST00000568993 TRAV26-1A0A087WT03 109 aa11.38□□□□□ -0.59
SNX20-204ENST00000568993 MGPP08493 103 aa11.38□□□□□ -0.59
SNX20-204ENST00000568993 STHQ8IWL8 128 aa11.38□□□□□ -0.59
SNX20-204ENST00000568993 SMIM2Q9BVW6 85 aa11.38□□□□□ -0.59
SNX20-204ENST00000568993 JPT2Q9H910 190 aa11.38□□□□□ -0.59
SNX20-204ENST00000568993 INSP01308 110 aa11.38□□□□□ -0.59
SNX20-204ENST00000568993 SUMO2P61956 95 aaKnown RBP11.38□□□□□ -0.59
SNX20-204ENST00000568993 PIK3CD-AS1Q5SR53 167 aa11.38□□□□□ -0.59
SNX20-204ENST00000568993 LINC01545Q5VT33 79 aa11.38□□□□□ -0.59
SNX20-204ENST00000568993 TRAV9-2A0A087WT02 112 aa11.37□□□□□ -0.59
SNX20-204ENST00000568993 K7EMI3 77 aa11.37□□□□□ -0.59
SNX20-204ENST00000568993 LINC00482Q8N8I6 264 aa11.37□□□□□ -0.59
SNX20-204ENST00000568993 PTH2Q96A98 100 aa11.37□□□□□ -0.59
SNX20-204ENST00000568993 CRYGDP07320 174 aa11.36□□□□□ -0.59
SNX20-204ENST00000568993 RPL32P62910 135 aaKnown RBP11.36□□□□□ -0.59
SNX20-204ENST00000568993 LAGE3Q14657 143 aa11.36□□□□□ -0.59
SNX20-204ENST00000568993 ZNF876PQ49A33 203 aa11.36□□□□□ -0.59
SNX20-204ENST00000568993 SPATA45Q537H7 98 aa11.36□□□□□ -0.59
SNX20-204ENST00000568993 RPL39LQ96EH5 51 aaKnown RBP11.36□□□□□ -0.59
SNX20-204ENST00000568993 C19orf73Q9NVV2 129 aa11.36□□□□□ -0.59
SNX20-204ENST00000568993 ATOH7Q8N100 152 aa11.35□□□□□ -0.59
SNX20-204ENST00000568993 IFI27L1Q96BM0 104 aa11.35□□□□□ -0.59
SNX20-204ENST00000568993 A0A087WWL8 130 aa11.35□□□□□ -0.59
SNX20-204ENST00000568993 PF4P02776 101 aa11.35□□□□□ -0.59
SNX20-204ENST00000568993 SUMO4Q6EEV6 95 aa11.35□□□□□ -0.59
SNX20-204ENST00000568993 TMEM158Q8WZ71 300 aa11.35□□□□□ -0.59
SNX20-204ENST00000568993 LINC01587Q99440 93 aa11.35□□□□□ -0.59
SNX20-204ENST00000568993 NIPBLQ6KC79 2804 aaeCLIP11.34□□□□□ -0.59
SNX20-204ENST00000568993 ZNF415Q09FC8 603 aa11.34□□□□□ -0.59
SNX20-204ENST00000568993 TRBV6-5A0A0K0K1A5 114 aa11.33□□□□□ -0.6
SNX20-204ENST00000568993 LGALS9BQ3B8N2 356 aa11.33□□□□□ -0.6
SNX20-204ENST00000568993 LGALS9CQ6DKI2 356 aa11.33□□□□□ -0.6
SNX20-204ENST00000568993 C11orf72Q8NBR9 251 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms