RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 GAGE12JA6NER3 117 aa8.07□□□□□ -1.12
SNX29-207ENST00000568949 F6UZH7 168 aa8.07□□□□□ -1.12
SNX29-207ENST00000568949 SMLR1H3BR10 107 aa8.07□□□□□ -1.12
SNX29-207ENST00000568949 GAGE1Q13065 139 aa8.07□□□□□ -1.12
SNX29-207ENST00000568949 GAGE4Q13068 117 aa8.07□□□□□ -1.12
SNX29-207ENST00000568949 GAGE5Q13069 117 aa8.07□□□□□ -1.12
SNX29-207ENST00000568949 GAGE13Q4V321 117 aa8.07□□□□□ -1.12
SNX29-207ENST00000568949 ATRAIDQ6UW56 229 aa8.07□□□□□ -1.12
SNX29-207ENST00000568949 TMUB2Q71RG4 321 aa8.07□□□□□ -1.12
SNX29-207ENST00000568949 TVP23CQ96ET8 276 aa8.07□□□□□ -1.12
SNX29-207ENST00000568949 C9orf85Q96MD7 179 aa8.07□□□□□ -1.12
SNX29-207ENST00000568949 TREM1Q9NP99 234 aa8.07□□□□□ -1.12
SNX29-207ENST00000568949 RPH3ALQ9UNE2 315 aa8.07□□□□□ -1.12
SNX29-207ENST00000568949 URGCP-MRPS24S4R325 110 aa8.07□□□□□ -1.12
SNX29-207ENST00000568949 ARL2-SNX15V9GYD0 113 aa8.07□□□□□ -1.12
SNX29-207ENST00000568949 HMGB3O15347 200 aaKnown RBP8.06□□□□□ -1.12
SNX29-207ENST00000568949 ZNF506Q5JVG8 444 aa8.06□□□□□ -1.12
SNX29-207ENST00000568949 ZFP2Q6ZN57 461 aa8.06□□□□□ -1.12
SNX29-207ENST00000568949 NIT1Q86X76 327 aa8.06□□□□□ -1.12
SNX29-207ENST00000568949 OR11H4Q8NGC9 324 aa8.06□□□□□ -1.12
SNX29-207ENST00000568949 DNAJC30Q96LL9 226 aa8.06□□□□□ -1.12
SNX29-207ENST00000568949 KLK12Q9UKR0 248 aa8.06□□□□□ -1.12
SNX29-207ENST00000568949 MAP1LC3B2A6NCE7 125 aa8.05□□□□□ -1.12
SNX29-207ENST00000568949 PGPEP1LA6NFU8 196 aa8.05□□□□□ -1.12
SNX29-207ENST00000568949 FGF8P55075 233 aaPredicted RBP8.05□□□□□ -1.12
SNX29-207ENST00000568949 SUMO1P63165 101 aaKnown RBP8.05□□□□□ -1.12
SNX29-207ENST00000568949 ELOBQ15370 118 aa8.05□□□□□ -1.12
SNX29-207ENST00000568949 ZFP69Q49AA0 526 aa8.05□□□□□ -1.12
SNX29-207ENST00000568949 SAPCD1Q5SSQ6 148 aa8.05□□□□□ -1.12
SNX29-207ENST00000568949 GOLT1AQ6ZVE7 132 aa8.05□□□□□ -1.12
SNX29-207ENST00000568949 HIST1H2BAQ96A08 127 aa8.05□□□□□ -1.12
SNX29-207ENST00000568949 UBE2WQ96B02 151 aa8.05□□□□□ -1.12
SNX29-207ENST00000568949 CHCHD7Q9BUK0 85 aa8.05□□□□□ -1.12
SNX29-207ENST00000568949 MAP1LC3BQ9GZQ8 125 aa8.05□□□□□ -1.12
SNX29-207ENST00000568949 PARLQ9H300 379 aa8.05□□□□□ -1.12
SNX29-207ENST00000568949 IFNA7P01567 189 aa8.04□□□□□ -1.12
SNX29-207ENST00000568949 FHITP49789 147 aa8.04□□□□□ -1.12
SNX29-207ENST00000568949 PIK3CD-AS1Q5SR53 167 aa8.04□□□□□ -1.12
SNX29-207ENST00000568949 SLC51BQ86UW2 128 aa8.04□□□□□ -1.12
SNX29-207ENST00000568949 C11orf21Q9P2W6 132 aa8.04□□□□□ -1.12
SNX29-207ENST00000568949 EPDR1Q9UM22 224 aa8.04□□□□□ -1.12
SNX29-207ENST00000568949 A8MWV9 139 aa8.03□□□□□ -1.12
SNX29-207ENST00000568949 TCRAP04437 139 aa8.03□□□□□ -1.12
SNX29-207ENST00000568949 H2AFB1P0C5Y9 115 aa8.03□□□□□ -1.12
SNX29-207ENST00000568949 RNASE3P12724 160 aaKnown RBP8.03□□□□□ -1.12
SNX29-207ENST00000568949 Q0VG73 95 aa8.03□□□□□ -1.12
SNX29-207ENST00000568949 TMEM75Q8N9X5 138 aa8.03□□□□□ -1.12
SNX29-207ENST00000568949 SFT2D1Q8WV19 159 aa8.03□□□□□ -1.12
SNX29-207ENST00000568949 MBD3L1Q8WWY6 194 aa8.03□□□□□ -1.12
SNX29-207ENST00000568949 LINC00479Q96M42 142 aa8.03□□□□□ -1.12
SNX29-207ENST00000568949 S100A9P06702 114 aaKnown RBP8.02□□□□□ -1.13
SNX29-207ENST00000568949 ZNF80P51504 273 aaPredicted RBP8.02□□□□□ -1.13
SNX29-207ENST00000568949 FAM213BQ8TBF2 198 aa8.02□□□□□ -1.13
SNX29-207ENST00000568949 SAMD10Q9BYL1 202 aa8.02□□□□□ -1.13
SNX29-207ENST00000568949 Q9UF83 564 aa8.02□□□□□ -1.13
SNX29-207ENST00000568949 A0A087WX48 190 aa8.01□□□□□ -1.13
SNX29-207ENST00000568949 ZNF726P1Q15940 193 aa8.01□□□□□ -1.13
SNX29-207ENST00000568949 DGAT2L7PQ6IED9 249 aa8.01□□□□□ -1.13
SNX29-207ENST00000568949 KCNIP4Q6PIL6 250 aa8.01□□□□□ -1.13
SNX29-207ENST00000568949 C9orf163Q8N9P6 203 aa8.01□□□□□ -1.13
SNX29-207ENST00000568949 C1orf43Q9BWL3 253 aa8.01□□□□□ -1.13
SNX29-207ENST00000568949 TNXBP22105 4242 aa8□□□□□ -1.13
SNX29-207ENST00000568949 FAM74A7A6NL05 159 aa8□□□□□ -1.13
SNX29-207ENST00000568949 EIF3GO75821 320 aaKnown RBP eCLIP8□□□□□ -1.13
SNX29-207ENST00000568949 TAGLN2P37802 199 aaKnown RBP8□□□□□ -1.13
SNX29-207ENST00000568949 UBE2G1P62253 170 aa8□□□□□ -1.13
SNX29-207ENST00000568949 FLI1Q01543 452 aaPredicted RBP8□□□□□ -1.13
SNX29-207ENST00000568949 SMUG1Q53HV7 270 aa8□□□□□ -1.13
SNX29-207ENST00000568949 CST9LP1Q5W188 147 aa8□□□□□ -1.13
SNX29-207ENST00000568949 UFSP1Q6NVU6 142 aa8□□□□□ -1.13
SNX29-207ENST00000568949 C14orf178Q8N769 122 aaPredicted RBP8□□□□□ -1.13
SNX29-207ENST00000568949 FMC1Q96HJ9 113 aa8□□□□□ -1.13
SNX29-207ENST00000568949 MANBALQ9NQG1 85 aa8□□□□□ -1.13
SNX29-207ENST00000568949 PSG8Q9UQ74 426 aa8□□□□□ -1.13
SNX29-207ENST00000568949 ZFP30Q9Y2G7 519 aa8□□□□□ -1.13
SNX29-207ENST00000568949 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8□□□□□ -1.13
SNX29-207ENST00000568949 TRAV1-1A0A0B4J248 108 aa7.99□□□□□ -1.13
SNX29-207ENST00000568949 USP17L23D6RBM5 183 aa7.99□□□□□ -1.13
SNX29-207ENST00000568949 PEX7O00628 323 aa7.99□□□□□ -1.13
SNX29-207ENST00000568949 GCGP01275 180 aa7.99□□□□□ -1.13
SNX29-207ENST00000568949 IFNA1P01562 189 aa7.99□□□□□ -1.13
SNX29-207ENST00000568949 ASIPP42127 132 aa7.99□□□□□ -1.13
SNX29-207ENST00000568949 GNG5P63218 68 aa7.99□□□□□ -1.13
SNX29-207ENST00000568949 RHODO00212 210 aa7.98□□□□□ -1.13
SNX29-207ENST00000568949 SULT1A2P50226 295 aa7.98□□□□□ -1.13
SNX29-207ENST00000568949 UBE2G2P60604 165 aa7.98□□□□□ -1.13
SNX29-207ENST00000568949 RPL19P84098 196 aaKnown RBP7.98□□□□□ -1.13
SNX29-207ENST00000568949 ENHOQ6UWT2 76 aa7.98□□□□□ -1.13
SNX29-207ENST00000568949 SDIM1Q6ZPB5 146 aa7.98□□□□□ -1.13
SNX29-207ENST00000568949 ZC2HC1AQ96GY0 325 aa7.98□□□□□ -1.13
SNX29-207ENST00000568949 SGK494Q96LW2 274 aa7.98□□□□□ -1.13
SNX29-207ENST00000568949 TRBV6-1A0A0K0K1D8 114 aa7.97□□□□□ -1.13
SNX29-207ENST00000568949 FABP5P3A8MUU1 101 aa7.97□□□□□ -1.13
SNX29-207ENST00000568949 PANO1I0J062 215 aa7.97□□□□□ -1.13
SNX29-207ENST00000568949 PRSS1P07477 247 aa7.97□□□□□ -1.13
SNX29-207ENST00000568949 S100A4P26447 101 aaKnown RBP7.97□□□□□ -1.13
SNX29-207ENST00000568949 PRNTQ86SH4 94 aa7.97□□□□□ -1.13
SNX29-207ENST00000568949 JPT2Q9H910 190 aa7.97□□□□□ -1.13
SNX29-207ENST00000568949 PAGE4O60829 102 aa7.96□□□□□ -1.14
SNX29-207ENST00000568949 CRPP02741 224 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms