RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-223	ENST00000568499	FAM74A4	Q5TZK3	123 aa		10.49	□□□□□ -0.73
KLHDC4-223	ENST00000568499	TMEM88	Q6PEY1	159 aa		10.49	□□□□□ -0.73
KLHDC4-223	ENST00000568499	POM121L12	Q8N7R1	296 aa		10.49	□□□□□ -0.73
KLHDC4-223	ENST00000568499	C15orf53	Q8NAA6	179 aa		10.49	□□□□□ -0.73
KLHDC4-223	ENST00000568499	CNFN	Q9BYD5	112 aa		10.49	□□□□□ -0.73
KLHDC4-223	ENST00000568499	TRAV26-1	A0A087WT03	109 aa		10.48	□□□□□ -0.73
KLHDC4-223	ENST00000568499	IGHV3-73	A0A0B4J1V6	119 aa		10.48	□□□□□ -0.73
KLHDC4-223	ENST00000568499		H3BNG1	76 aa		10.48	□□□□□ -0.73
KLHDC4-223	ENST00000568499	APOC3	P02656	99 aa		10.48	□□□□□ -0.73
KLHDC4-223	ENST00000568499	RHEB	Q15382	184 aa		10.48	□□□□□ -0.73
KLHDC4-223	ENST00000568499	SLC7A5P1	Q8MH63	180 aa		10.48	□□□□□ -0.73
KLHDC4-223	ENST00000568499	SVBP	Q8N300	66 aa		10.48	□□□□□ -0.73
KLHDC4-223	ENST00000568499	PRADC1	Q9BSG0	188 aa		10.48	□□□□□ -0.73
KLHDC4-223	ENST00000568499		A0A087WWL8	130 aa		10.47	□□□□□ -0.73
KLHDC4-223	ENST00000568499	SNAPIN	O95295	136 aa		10.47	□□□□□ -0.73
KLHDC4-223	ENST00000568499	C14orf178	Q8N769	122 aa	Predicted RBP	10.47	□□□□□ -0.73
KLHDC4-223	ENST00000568499	NUP35	Q8NFH5	326 aa		10.47	□□□□□ -0.73
KLHDC4-223	ENST00000568499	JPT2	Q9H910	190 aa		10.47	□□□□□ -0.73
KLHDC4-223	ENST00000568499	MUC4	Q99102	2169 aa		10.46	□□□□□ -0.73
KLHDC4-223	ENST00000568499		A0A0J9YY99	117 aa		10.46	□□□□□ -0.73
KLHDC4-223	ENST00000568499		A0A1B0GW15	77 aa		10.46	□□□□□ -0.73
KLHDC4-223	ENST00000568499	TRBV6-4	A0A1B0GX49	114 aa		10.46	□□□□□ -0.73
KLHDC4-223	ENST00000568499		F5H697	171 aa		10.46	□□□□□ -0.73
KLHDC4-223	ENST00000568499	S100A8	P05109	93 aa		10.46	□□□□□ -0.73
KLHDC4-223	ENST00000568499	CRYGD	P07320	174 aa		10.46	□□□□□ -0.73
KLHDC4-223	ENST00000568499	GATA1	P15976	413 aa	Predicted RBP	10.46	□□□□□ -0.73
KLHDC4-223	ENST00000568499	CRYBA4	P53673	196 aa		10.46	□□□□□ -0.73
KLHDC4-223	ENST00000568499	RHOH	Q15669	191 aa		10.46	□□□□□ -0.73
KLHDC4-223	ENST00000568499	KCNIP4	Q6PIL6	250 aa		10.46	□□□□□ -0.73
KLHDC4-223	ENST00000568499	CLRN3	Q8NCR9	226 aa		10.46	□□□□□ -0.73
KLHDC4-223	ENST00000568499	SAMD10	Q9BYL1	202 aa		10.46	□□□□□ -0.73
KLHDC4-223	ENST00000568499	NUDT3	O95989	172 aa		10.45	□□□□□ -0.74
KLHDC4-223	ENST00000568499	S100P	P25815	95 aa		10.45	□□□□□ -0.74
KLHDC4-223	ENST00000568499	RAB4B	P61018	213 aa		10.45	□□□□□ -0.74
KLHDC4-223	ENST00000568499	ZNF56	Q15929	161 aa		10.45	□□□□□ -0.74
KLHDC4-223	ENST00000568499	IMMP2L	Q96T52	175 aa		10.45	□□□□□ -0.74
KLHDC4-223	ENST00000568499	DPH3P1	Q9H4G8	78 aa		10.45	□□□□□ -0.74
KLHDC4-223	ENST00000568499	TMEM242	Q9NWH2	141 aa		10.45	□□□□□ -0.74
KLHDC4-223	ENST00000568499	MSRB1	Q9NZV6	116 aa		10.45	□□□□□ -0.74
KLHDC4-223	ENST00000568499		A0A087WWC5	75 aa		10.44	□□□□□ -0.74
KLHDC4-223	ENST00000568499	C7orf77	A4D0Y5	90 aa		10.44	□□□□□ -0.74
KLHDC4-223	ENST00000568499	MGP	P08493	103 aa		10.44	□□□□□ -0.74
KLHDC4-223	ENST00000568499	EVI2A	P22794	236 aa		10.44	□□□□□ -0.74
KLHDC4-223	ENST00000568499	UFSP1	Q6NVU6	142 aa		10.44	□□□□□ -0.74
KLHDC4-223	ENST00000568499	SLC25A29	Q8N8R3	303 aa		10.44	□□□□□ -0.74
KLHDC4-223	ENST00000568499	RPS10P5	Q9NQ39	176 aa		10.44	□□□□□ -0.74
KLHDC4-223	ENST00000568499	ICOS	Q9Y6W8	199 aa		10.44	□□□□□ -0.74
KLHDC4-223	ENST00000568499		H7C1H1	209 aa		10.43	□□□□□ -0.74
KLHDC4-223	ENST00000568499		K7EQD1	137 aa		10.43	□□□□□ -0.74
KLHDC4-223	ENST00000568499	GYPE	P15421	78 aa		10.43	□□□□□ -0.74
KLHDC4-223	ENST00000568499	MRPL23	Q16540	153 aa	Known RBP	10.43	□□□□□ -0.74
KLHDC4-223	ENST00000568499	SH2D6	Q7Z4S9	175 aa		10.43	□□□□□ -0.74
KLHDC4-223	ENST00000568499	APLN	Q9ULZ1	77 aa		10.43	□□□□□ -0.74
KLHDC4-223	ENST00000568499	SRI	P30626	198 aa		10.42	□□□□□ -0.74
KLHDC4-223	ENST00000568499	ATP5L2	Q7Z4Y8	100 aa		10.42	□□□□□ -0.74
KLHDC4-223	ENST00000568499	VSIG2	Q96IQ7	327 aa		10.42	□□□□□ -0.74
KLHDC4-223	ENST00000568499	BTF3L4	Q96K17	158 aa		10.42	□□□□□ -0.74
KLHDC4-223	ENST00000568499	DNAH7	Q8WXX0	4024 aa		10.41	□□□□□ -0.74
KLHDC4-223	ENST00000568499	TRBV10-1	A0A0K0K1A3	114 aa		10.41	□□□□□ -0.74
KLHDC4-223	ENST00000568499	FAM3B	P58499	235 aa	Predicted RBP	10.41	□□□□□ -0.74
KLHDC4-223	ENST00000568499	HBB	P68871	147 aa		10.41	□□□□□ -0.74
KLHDC4-223	ENST00000568499	TMEM191A	Q9H0A3	160 aa		10.41	□□□□□ -0.74
KLHDC4-223	ENST00000568499	KIF25-AS1	Q9Y6Z4	181 aa		10.41	□□□□□ -0.74
KLHDC4-223	ENST00000568499	TRAV9-1	A0A075B6T8	112 aa		10.4	□□□□□ -0.74
KLHDC4-223	ENST00000568499		P0DMU3	169 aa		10.4	□□□□□ -0.74
KLHDC4-223	ENST00000568499	FAM231A	P0DMU4	169 aa		10.4	□□□□□ -0.74
KLHDC4-223	ENST00000568499	FAM231C	P0DMU5	169 aa		10.4	□□□□□ -0.74
KLHDC4-223	ENST00000568499	CAMP	P49913	170 aa		10.4	□□□□□ -0.74
KLHDC4-223	ENST00000568499	MRPL54	Q6P161	138 aa	Known RBP	10.4	□□□□□ -0.74
KLHDC4-223	ENST00000568499		Q6ZSN1	163 aa		10.4	□□□□□ -0.74
KLHDC4-223	ENST00000568499	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	10.4	□□□□□ -0.74
KLHDC4-223	ENST00000568499	CCL18	P55774	89 aa		10.39	□□□□□ -0.75
KLHDC4-223	ENST00000568499	RPL36A	P83881	106 aa	Known RBP	10.39	□□□□□ -0.75
KLHDC4-223	ENST00000568499	NEGR1	Q7Z3B1	354 aa		10.39	□□□□□ -0.75
KLHDC4-223	ENST00000568499	FRZB	Q92765	325 aa		10.39	□□□□□ -0.75
KLHDC4-223	ENST00000568499	RPL36AL	Q969Q0	106 aa	Known RBP	10.39	□□□□□ -0.75
KLHDC4-223	ENST00000568499		A0A096LPF7	62 aa		10.38	□□□□□ -0.75
KLHDC4-223	ENST00000568499	LINC00315	P59091	139 aa		10.38	□□□□□ -0.75
KLHDC4-223	ENST00000568499	UBE2DNL	Q8IWF7	75 aa		10.38	□□□□□ -0.75
KLHDC4-223	ENST00000568499	GAGE12J	A6NER3	117 aa		10.37	□□□□□ -0.75
KLHDC4-223	ENST00000568499	GAGE1	Q13065	139 aa		10.37	□□□□□ -0.75
KLHDC4-223	ENST00000568499	GAGE4	Q13068	117 aa		10.37	□□□□□ -0.75
KLHDC4-223	ENST00000568499	GAGE5	Q13069	117 aa		10.37	□□□□□ -0.75
KLHDC4-223	ENST00000568499	GAGE13	Q4V321	117 aa		10.37	□□□□□ -0.75
KLHDC4-223	ENST00000568499	SUMO4	Q6EEV6	95 aa		10.37	□□□□□ -0.75
KLHDC4-223	ENST00000568499	RASL11A	Q6T310	242 aa		10.37	□□□□□ -0.75
KLHDC4-223	ENST00000568499	DNAJC30	Q96LL9	226 aa		10.37	□□□□□ -0.75
KLHDC4-223	ENST00000568499	TNFRSF18	Q9Y5U5	241 aa		10.37	□□□□□ -0.75
KLHDC4-223	ENST00000568499	TRBV7-3	A0A075B6L6	115 aa		10.36	□□□□□ -0.75
KLHDC4-223	ENST00000568499	LOC100131303	A0A0U1RQF7	123 aa		10.36	□□□□□ -0.75
KLHDC4-223	ENST00000568499		A0A1B0GXF2	115 aa		10.36	□□□□□ -0.75
KLHDC4-223	ENST00000568499	LGALS9C	Q6DKI2	356 aa		10.36	□□□□□ -0.75
KLHDC4-223	ENST00000568499	ATP6V0E2	Q8NHE4	81 aa		10.36	□□□□□ -0.75
KLHDC4-223	ENST00000568499	ZNRF2	Q8NHG8	242 aa		10.36	□□□□□ -0.75
KLHDC4-223	ENST00000568499	MRAP2	Q96G30	205 aa		10.36	□□□□□ -0.75
KLHDC4-223	ENST00000568499	URGCP-MRPS24	S4R325	110 aa		10.36	□□□□□ -0.75
KLHDC4-223	ENST00000568499		M0QY20	66 aa		10.35	□□□□□ -0.75
KLHDC4-223	ENST00000568499	PPP1R17	O96001	155 aa		10.35	□□□□□ -0.75
KLHDC4-223	ENST00000568499	NIT2	Q9NQR4	276 aa		10.35	□□□□□ -0.75
KLHDC4-223	ENST00000568499	LY6G6C	O95867	125 aa		10.34	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms