RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 GFI1BQ5VTD9 330 aa4.5□□□□□ -1.69
CAPN3-218ENST00000568153 HIST3H2BBQ8N257 126 aa4.5□□□□□ -1.69
CAPN3-218ENST00000568153 WFDC9Q8NEX5 89 aa4.5□□□□□ -1.69
CAPN3-218ENST00000568153 LINC01587Q99440 93 aa4.5□□□□□ -1.69
CAPN3-218ENST00000568153 MCRIP2Q9BUT9 160 aaKnown RBP4.5□□□□□ -1.69
CAPN3-218ENST00000568153 PHLDA3Q9Y5J5 127 aa4.5□□□□□ -1.69
CAPN3-218ENST00000568153 ANK3Q12955 4377 aaKnown RBP4.49□□□□□ -1.69
CAPN3-218ENST00000568153 H3BVH4 76 aa4.49□□□□□ -1.69
CAPN3-218ENST00000568153 PPBPP02775 128 aa4.49□□□□□ -1.69
CAPN3-218ENST00000568153 IGKV2-30P06310 120 aa4.49□□□□□ -1.69
CAPN3-218ENST00000568153 RNASE3P12724 160 aaKnown RBP4.49□□□□□ -1.69
CAPN3-218ENST00000568153 FABP4P15090 132 aa4.49□□□□□ -1.69
CAPN3-218ENST00000568153 RAB4AP20338 218 aa4.49□□□□□ -1.69
CAPN3-218ENST00000568153 CKS2P33552 79 aa4.49□□□□□ -1.69
CAPN3-218ENST00000568153 MRPL51Q4U2R6 128 aaKnown RBP4.49□□□□□ -1.69
CAPN3-218ENST00000568153 PDZD11Q5EBL8 140 aa4.49□□□□□ -1.69
CAPN3-218ENST00000568153 NIT1Q86X76 327 aa4.49□□□□□ -1.69
CAPN3-218ENST00000568153 TMEM256Q8N2U0 113 aa4.49□□□□□ -1.69
CAPN3-218ENST00000568153 C3orf56Q8N813 242 aa4.49□□□□□ -1.69
CAPN3-218ENST00000568153 OR10AG1Q8NH19 301 aa4.49□□□□□ -1.69
CAPN3-218ENST00000568153 TMEM18Q96B42 140 aa4.49□□□□□ -1.69
CAPN3-218ENST00000568153 C20orf144Q9BQM9 153 aa4.49□□□□□ -1.69
CAPN3-218ENST00000568153 SCRT2Q9NQ03 307 aa4.49□□□□□ -1.69
CAPN3-218ENST00000568153 U3KQK5 164 aa4.49□□□□□ -1.69
CAPN3-218ENST00000568153 HIVEP1P15822 2718 aa4.48□□□□□ -1.69
CAPN3-218ENST00000568153 IGHV3-16A0A0C4DH30 117 aa4.48□□□□□ -1.69
CAPN3-218ENST00000568153 RBMY1BA6NDE4 496 aaKnown RBP4.48□□□□□ -1.69
CAPN3-218ENST00000568153 RBMY1EA6NEQ0 496 aaKnown RBP4.48□□□□□ -1.69
CAPN3-218ENST00000568153 CBY3A6NI87 242 aa4.48□□□□□ -1.69
CAPN3-218ENST00000568153 IFITM10A6NMD0 228 aa4.48□□□□□ -1.69
CAPN3-218ENST00000568153 CRXO43186 299 aaPredicted RBP4.48□□□□□ -1.69
CAPN3-218ENST00000568153 NUPR1O60356 82 aa4.48□□□□□ -1.69
CAPN3-218ENST00000568153 SERF1AO75920 110 aa4.48□□□□□ -1.69
CAPN3-218ENST00000568153 RBMY1DP0C7P1 496 aaKnown RBP4.48□□□□□ -1.69
CAPN3-218ENST00000568153 LINC00614P0C842 121 aa4.48□□□□□ -1.69
CAPN3-218ENST00000568153 ESDP10768 282 aa4.48□□□□□ -1.69
CAPN3-218ENST00000568153 HTN1P15515 57 aa4.48□□□□□ -1.69
CAPN3-218ENST00000568153 EVI2AP22794 236 aa4.48□□□□□ -1.69
CAPN3-218ENST00000568153 KRTAP24-1Q3LI83 254 aa4.48□□□□□ -1.69
CAPN3-218ENST00000568153 TRPT1Q86TN4 253 aaKnown RBP4.48□□□□□ -1.69
CAPN3-218ENST00000568153 AMN1Q8IY45 258 aa4.48□□□□□ -1.69
CAPN3-218ENST00000568153 ORMDL3Q8N138 153 aa4.48□□□□□ -1.69
CAPN3-218ENST00000568153 Q8N9P0 234 aaPredicted RBP4.48□□□□□ -1.69
CAPN3-218ENST00000568153 OR10D4PQ8NGN7 298 aa4.48□□□□□ -1.69
CAPN3-218ENST00000568153 C18orf32Q8TCD1 76 aa4.48□□□□□ -1.69
CAPN3-218ENST00000568153 TMEM158Q8WZ71 300 aa4.48□□□□□ -1.69
CAPN3-218ENST00000568153 PRELID3AQ96N28 172 aa4.48□□□□□ -1.69
CAPN3-218ENST00000568153 LINC00467Q9BRT7 94 aa4.48□□□□□ -1.69
CAPN3-218ENST00000568153 TP53TG3Q9ULZ0 132 aa4.48□□□□□ -1.69
CAPN3-218ENST00000568153 D6R8Y8 96 aa4.47□□□□□ -1.69
CAPN3-218ENST00000568153 M0R381 172 aa4.47□□□□□ -1.69
CAPN3-218ENST00000568153 INSP01308 110 aa4.47□□□□□ -1.69
CAPN3-218ENST00000568153 SMIM17P0DL12 118 aa4.47□□□□□ -1.69
CAPN3-218ENST00000568153 IQCJQ1A5X6 159 aa4.47□□□□□ -1.69
CAPN3-218ENST00000568153 MORN3Q6PF18 240 aaPredicted RBP4.47□□□□□ -1.69
CAPN3-218ENST00000568153 C12orf54Q6X4T0 127 aa4.47□□□□□ -1.69
CAPN3-218ENST00000568153 GTSCR1Q86UQ5 136 aa4.47□□□□□ -1.69
CAPN3-218ENST00000568153 CHCHD1Q96BP2 118 aaKnown RBP4.47□□□□□ -1.69
CAPN3-218ENST00000568153 RNF185Q96GF1 192 aa4.47□□□□□ -1.69
CAPN3-218ENST00000568153 PACRGQ96M98 296 aaPredicted RBP4.47□□□□□ -1.69
CAPN3-218ENST00000568153 C9orf85Q96MD7 179 aa4.47□□□□□ -1.69
CAPN3-218ENST00000568153 HIST1H2BLQ99880 126 aa4.47□□□□□ -1.69
CAPN3-218ENST00000568153 TMEM208Q9BTX3 173 aa4.47□□□□□ -1.69
CAPN3-218ENST00000568153 SAMD10Q9BYL1 202 aa4.47□□□□□ -1.69
CAPN3-218ENST00000568153 MDFICQ9P1T7 246 aa4.47□□□□□ -1.69
CAPN3-218ENST00000568153 XCL2Q9UBD3 114 aa4.47□□□□□ -1.69
CAPN3-218ENST00000568153 LAMTOR2Q9Y2Q5 125 aa4.47□□□□□ -1.69
CAPN3-218ENST00000568153 GAGE12JA6NER3 117 aa4.46□□□□□ -1.7
CAPN3-218ENST00000568153 HSBP1O75506 76 aa4.46□□□□□ -1.7
CAPN3-218ENST00000568153 RPL35AP18077 110 aaKnown RBP4.46□□□□□ -1.7
CAPN3-218ENST00000568153 PMCHP20382 165 aa4.46□□□□□ -1.7
CAPN3-218ENST00000568153 RNASEKQ6P5S7 137 aaKnown RBP4.46□□□□□ -1.7
CAPN3-218ENST00000568153 LINC00518Q8N0U6 118 aa4.46□□□□□ -1.7
CAPN3-218ENST00000568153 DEFB125Q8N687 156 aa4.46□□□□□ -1.7
CAPN3-218ENST00000568153 C14orf178Q8N769 122 aaPredicted RBP4.46□□□□□ -1.7
CAPN3-218ENST00000568153 PTH2Q96A98 100 aa4.46□□□□□ -1.7
CAPN3-218ENST00000568153 MRAP2Q96G30 205 aa4.46□□□□□ -1.7
CAPN3-218ENST00000568153 SPXQ9BT56 116 aa4.46□□□□□ -1.7
CAPN3-218ENST00000568153 C1QTNF4Q9BXJ3 329 aa4.46□□□□□ -1.7
CAPN3-218ENST00000568153 CSTL1Q9H114 145 aa4.46□□□□□ -1.7
CAPN3-218ENST00000568153 DPH3P1Q9H4G8 78 aa4.46□□□□□ -1.7
CAPN3-218ENST00000568153 FN1P02751 2386 aaKnown RBP4.46□□□□□ -1.7
CAPN3-218ENST00000568153 MTORP42345 2549 aa4.45□□□□□ -1.7
CAPN3-218ENST00000568153 LOC389332A0A1B0GUA5 103 aa4.45□□□□□ -1.7
CAPN3-218ENST00000568153 PRSS47A8MTI9 375 aa4.45□□□□□ -1.7
CAPN3-218ENST00000568153 SMKR1H3BMG3 65 aa4.45□□□□□ -1.7
CAPN3-218ENST00000568153 M0R2P5 195 aa4.45□□□□□ -1.7
CAPN3-218ENST00000568153 NXPH4O95158 308 aa4.45□□□□□ -1.7
CAPN3-218ENST00000568153 PPP1R17O96001 155 aa4.45□□□□□ -1.7
CAPN3-218ENST00000568153 RBMY1A1P0DJD3 496 aaKnown RBP4.45□□□□□ -1.7
CAPN3-218ENST00000568153 RBMY1CP0DJD4 496 aa4.45□□□□□ -1.7
CAPN3-218ENST00000568153 IGLL1P15814 213 aa4.45□□□□□ -1.7
CAPN3-218ENST00000568153 ZNF415Q09FC8 603 aa4.45□□□□□ -1.7
CAPN3-218ENST00000568153 RBMY1FQ15415 496 aaKnown RBP4.45□□□□□ -1.7
CAPN3-218ENST00000568153 ZNF876PQ49A33 203 aa4.45□□□□□ -1.7
CAPN3-218ENST00000568153 FA2HQ7L5A8 372 aa4.45□□□□□ -1.7
CAPN3-218ENST00000568153 C1orf158Q8N1D5 194 aa4.45□□□□□ -1.7
CAPN3-218ENST00000568153 AP1S3Q96PC3 154 aa4.45□□□□□ -1.7
CAPN3-218ENST00000568153 RCHY1Q96PM5 261 aa4.45□□□□□ -1.7
CAPN3-218ENST00000568153 MAP1LC3AQ9H492 121 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms