RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	HIST1H2BO	P23527	126 aa		4.77	□□□□□ -1.65
SF3B3-209	ENST00000567635	HIST1H2BB	P33778	126 aa		4.77	□□□□□ -1.65
SF3B3-209	ENST00000567635	AKR1C3	P42330	323 aa		4.77	□□□□□ -1.65
SF3B3-209	ENST00000567635	CRYBA4	P53673	196 aa		4.77	□□□□□ -1.65
SF3B3-209	ENST00000567635	HIST1H2BD	P58876	126 aa		4.77	□□□□□ -1.65
SF3B3-209	ENST00000567635	HIST1H2BC	P62807	126 aa		4.77	□□□□□ -1.65
SF3B3-209	ENST00000567635	MRPL23	Q16540	153 aa	Known RBP	4.77	□□□□□ -1.65
SF3B3-209	ENST00000567635	HIST2H2BE	Q16778	126 aa		4.77	□□□□□ -1.65
SF3B3-209	ENST00000567635	MAJIN	Q3KP22	176 aa		4.77	□□□□□ -1.65
SF3B3-209	ENST00000567635	TTC32	Q5I0X7	151 aa		4.77	□□□□□ -1.65
SF3B3-209	ENST00000567635	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	4.77	□□□□□ -1.65
SF3B3-209	ENST00000567635	ZNF664	Q8N3J9	261 aa		4.77	□□□□□ -1.65
SF3B3-209	ENST00000567635	HIST1H2BH	Q93079	126 aa		4.77	□□□□□ -1.65
SF3B3-209	ENST00000567635	KCNS1	Q96KK3	526 aa		4.77	□□□□□ -1.65
SF3B3-209	ENST00000567635	SGK494	Q96LW2	274 aa		4.77	□□□□□ -1.65
SF3B3-209	ENST00000567635	C8orf49	Q96NF6	230 aa		4.77	□□□□□ -1.65
SF3B3-209	ENST00000567635	HIST1H2BN	Q99877	126 aa		4.77	□□□□□ -1.65
SF3B3-209	ENST00000567635	HIST1H2BM	Q99879	126 aa		4.77	□□□□□ -1.65
SF3B3-209	ENST00000567635	SDF2L1	Q9HCN8	221 aa		4.77	□□□□□ -1.65
SF3B3-209	ENST00000567635	PSG8	Q9UQ74	426 aa		4.77	□□□□□ -1.65
SF3B3-209	ENST00000567635		A0A1B0GV50	99 aa		4.76	□□□□□ -1.65
SF3B3-209	ENST00000567635		A0A1W2PRE2	83 aa		4.76	□□□□□ -1.65
SF3B3-209	ENST00000567635	FBLL1	A6NHQ2	334 aa	Known RBP	4.76	□□□□□ -1.65
SF3B3-209	ENST00000567635		F6UZH7	168 aa		4.76	□□□□□ -1.65
SF3B3-209	ENST00000567635	IFNA1	P01562	189 aa		4.76	□□□□□ -1.65
SF3B3-209	ENST00000567635	IGLV2-11	P01706	119 aa		4.76	□□□□□ -1.65
SF3B3-209	ENST00000567635	NPS	P0C0P6	89 aa		4.76	□□□□□ -1.65
SF3B3-209	ENST00000567635	MED14OS	P0DP75	135 aa		4.76	□□□□□ -1.65
SF3B3-209	ENST00000567635	FGF8	P55075	233 aa	Predicted RBP	4.76	□□□□□ -1.65
SF3B3-209	ENST00000567635	LYPD5	Q6UWN5	251 aa		4.76	□□□□□ -1.65
SF3B3-209	ENST00000567635	NEGR1	Q7Z3B1	354 aa		4.76	□□□□□ -1.65
SF3B3-209	ENST00000567635	PRNT	Q86SH4	94 aa		4.76	□□□□□ -1.65
SF3B3-209	ENST00000567635	OR4C5	Q8NGB2	326 aa		4.76	□□□□□ -1.65
SF3B3-209	ENST00000567635	ZNF479	Q96JC4	524 aa		4.76	□□□□□ -1.65
SF3B3-209	ENST00000567635	HIST1H2BL	Q99880	126 aa		4.76	□□□□□ -1.65
SF3B3-209	ENST00000567635	GNG13	Q9P2W3	67 aa		4.76	□□□□□ -1.65
SF3B3-209	ENST00000567635	VAX2	Q9UIW0	290 aa		4.76	□□□□□ -1.65
SF3B3-209	ENST00000567635	TRAV4	A0A0B4J268	109 aa		4.75	□□□□□ -1.65
SF3B3-209	ENST00000567635		B4DEV8	164 aa		4.75	□□□□□ -1.65
SF3B3-209	ENST00000567635	GGTLC3	B5MD39	225 aa		4.75	□□□□□ -1.65
SF3B3-209	ENST00000567635		K7EP13	123 aa		4.75	□□□□□ -1.65
SF3B3-209	ENST00000567635	SIVA1	O15304	175 aa		4.75	□□□□□ -1.65
SF3B3-209	ENST00000567635	NXPH4	O95158	308 aa		4.75	□□□□□ -1.65
SF3B3-209	ENST00000567635	ORM1	P02763	201 aa		4.75	□□□□□ -1.65
SF3B3-209	ENST00000567635	PPBP	P02775	128 aa		4.75	□□□□□ -1.65
SF3B3-209	ENST00000567635	TYMS	P04818	313 aa		4.75	□□□□□ -1.65
SF3B3-209	ENST00000567635	PFN1	P07737	140 aa	Known RBP	4.75	□□□□□ -1.65
SF3B3-209	ENST00000567635	TRGC1	P0CF51	173 aa		4.75	□□□□□ -1.65
SF3B3-209	ENST00000567635	GZMB	P10144	247 aa		4.75	□□□□□ -1.65
SF3B3-209	ENST00000567635	BCL2	P10415	239 aa		4.75	□□□□□ -1.65
SF3B3-209	ENST00000567635	GYPE	P15421	78 aa		4.75	□□□□□ -1.65
SF3B3-209	ENST00000567635	ZNF80	P51504	273 aa	Predicted RBP	4.75	□□□□□ -1.65
SF3B3-209	ENST00000567635	RBX1	P62877	108 aa		4.75	□□□□□ -1.65
SF3B3-209	ENST00000567635	CYB561D1	Q8N8Q1	229 aa		4.75	□□□□□ -1.65
SF3B3-209	ENST00000567635	TMEM75	Q8N9X5	138 aa		4.75	□□□□□ -1.65
SF3B3-209	ENST00000567635	OR2D3	Q8NGH3	330 aa		4.75	□□□□□ -1.65
SF3B3-209	ENST00000567635	TMEM18	Q96B42	140 aa		4.75	□□□□□ -1.65
SF3B3-209	ENST00000567635	TXNDC17	Q9BRA2	123 aa		4.75	□□□□□ -1.65
SF3B3-209	ENST00000567635	KRTAP1-5	Q9BYS1	174 aa		4.75	□□□□□ -1.65
SF3B3-209	ENST00000567635	MANBAL	Q9NQG1	85 aa		4.75	□□□□□ -1.65
SF3B3-209	ENST00000567635	TRAV34	A0A0B4J273	112 aa		4.74	□□□□□ -1.65
SF3B3-209	ENST00000567635	C20orf202	A1L168	122 aa		4.74	□□□□□ -1.65
SF3B3-209	ENST00000567635	FABP5P3	A8MUU1	101 aa		4.74	□□□□□ -1.65
SF3B3-209	ENST00000567635		C9JCJ5	164 aa		4.74	□□□□□ -1.65
SF3B3-209	ENST00000567635		K7EQD1	137 aa		4.74	□□□□□ -1.65
SF3B3-209	ENST00000567635	SRI	P30626	198 aa		4.74	□□□□□ -1.65
SF3B3-209	ENST00000567635	UBE2G2	P60604	165 aa		4.74	□□□□□ -1.65
SF3B3-209	ENST00000567635	ELOB	Q15370	118 aa		4.74	□□□□□ -1.65
SF3B3-209	ENST00000567635	TMEM241	Q24JQ0	296 aa		4.74	□□□□□ -1.65
SF3B3-209	ENST00000567635	ZNF876P	Q49A33	203 aa		4.74	□□□□□ -1.65
SF3B3-209	ENST00000567635	COA6	Q5JTJ3	125 aa	Known RBP	4.74	□□□□□ -1.65
SF3B3-209	ENST00000567635	COL5A1-AS1	Q5SY13	56 aa		4.74	□□□□□ -1.65
SF3B3-209	ENST00000567635	SH2D6	Q7Z4S9	175 aa		4.74	□□□□□ -1.65
SF3B3-209	ENST00000567635	PTH2	Q96A98	100 aa		4.74	□□□□□ -1.65
SF3B3-209	ENST00000567635	LINC00479	Q96M42	142 aa		4.74	□□□□□ -1.65
SF3B3-209	ENST00000567635	C11orf21	Q9P2W6	132 aa		4.74	□□□□□ -1.65
SF3B3-209	ENST00000567635	ZFP30	Q9Y2G7	519 aa		4.74	□□□□□ -1.65
SF3B3-209	ENST00000567635	DNAH10	Q8IVF4	4471 aa		4.74	□□□□□ -1.65
SF3B3-209	ENST00000567635	PCLO	Q9Y6V0	5065 aa		4.73	□□□□□ -1.65
SF3B3-209	ENST00000567635	TRAV9-2	A0A087WT02	112 aa		4.73	□□□□□ -1.65
SF3B3-209	ENST00000567635	TMEM250	H0YL14	139 aa		4.73	□□□□□ -1.65
SF3B3-209	ENST00000567635	PEX7	O00628	323 aa		4.73	□□□□□ -1.65
SF3B3-209	ENST00000567635	RS1	O15537	224 aa		4.73	□□□□□ -1.65
SF3B3-209	ENST00000567635	PAGE4	O60829	102 aa		4.73	□□□□□ -1.65
SF3B3-209	ENST00000567635	GHRH	P01286	108 aa		4.73	□□□□□ -1.65
SF3B3-209	ENST00000567635	TRGC2	P03986	189 aa		4.73	□□□□□ -1.65
SF3B3-209	ENST00000567635	PDZD11	Q5EBL8	140 aa		4.73	□□□□□ -1.65
SF3B3-209	ENST00000567635	ZNF575	Q86XF7	245 aa		4.73	□□□□□ -1.65
SF3B3-209	ENST00000567635	NUDT10	Q8NFP7	164 aa		4.73	□□□□□ -1.65
SF3B3-209	ENST00000567635	ARL2-SNX15	V9GYD0	113 aa		4.73	□□□□□ -1.65
SF3B3-209	ENST00000567635	RYR1	P21817	5038 aa		4.72	□□□□□ -1.65
SF3B3-209	ENST00000567635	TRBV24-1	A0A075B6N3	115 aa		4.72	□□□□□ -1.65
SF3B3-209	ENST00000567635	PGPEP1L	A6NFU8	196 aa		4.72	□□□□□ -1.65
SF3B3-209	ENST00000567635	C16orf90	A8MZG2	172 aa		4.72	□□□□□ -1.65
SF3B3-209	ENST00000567635	PDE6D	O43924	150 aa		4.72	□□□□□ -1.65
SF3B3-209	ENST00000567635	GATA1	P15976	413 aa	Predicted RBP	4.72	□□□□□ -1.65
SF3B3-209	ENST00000567635	S100A4	P26447	101 aa	Known RBP	4.72	□□□□□ -1.65
SF3B3-209	ENST00000567635	CEBPG	P53567	150 aa		4.72	□□□□□ -1.65
SF3B3-209	ENST00000567635	LINC00315	P59091	139 aa		4.72	□□□□□ -1.65
SF3B3-209	ENST00000567635	RPS20	P60866	119 aa	Known RBP	4.72	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms