RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 NEXN-AS1Q8NBZ9 246 aa13.24□□□□□ -0.29
CMTM3-214ENST00000567572 RNASE8Q8TDE3 154 aaKnown RBP13.24□□□□□ -0.29
CMTM3-214ENST00000567572 LGALS9O00182 355 aa13.23□□□□□ -0.29
CMTM3-214ENST00000567572 GNRH2O43555 120 aa13.23□□□□□ -0.29
CMTM3-214ENST00000567572 TCTAP57738 103 aa13.23□□□□□ -0.29
CMTM3-214ENST00000567572 DEFB1P60022 68 aa13.23□□□□□ -0.29
CMTM3-214ENST00000567572 ERASQ7Z444 233 aa13.23□□□□□ -0.29
CMTM3-214ENST00000567572 DNAJC9-AS1A6NH13 148 aa13.23□□□□□ -0.29
CMTM3-214ENST00000567572 K7EP34 96 aa13.23□□□□□ -0.29
CMTM3-214ENST00000567572 C2orf66Q6UXQ4 117 aa13.23□□□□□ -0.29
CMTM3-214ENST00000567572 RPL39LQ96EH5 51 aaKnown RBP13.23□□□□□ -0.29
CMTM3-214ENST00000567572 CHTOPQ9Y3Y2 248 aaKnown RBP13.23□□□□□ -0.29
CMTM3-214ENST00000567572 IGKV3-7A0A075B6H7 116 aa13.22□□□□□ -0.29
CMTM3-214ENST00000567572 SMIM13P0DJ93 91 aa13.22□□□□□ -0.29
CMTM3-214ENST00000567572 CDKN1BP46527 198 aa13.22□□□□□ -0.29
CMTM3-214ENST00000567572 LINC00315P59091 139 aa13.22□□□□□ -0.29
CMTM3-214ENST00000567572 RBX1P62877 108 aa13.22□□□□□ -0.29
CMTM3-214ENST00000567572 OR5A1Q8NGJ0 315 aa13.22□□□□□ -0.29
CMTM3-214ENST00000567572 EDN2P20800 178 aa13.21□□□□□ -0.29
CMTM3-214ENST00000567572 CST9LQ9H4G1 147 aa13.21□□□□□ -0.29
CMTM3-214ENST00000567572 GAGE12BA1L429 117 aa13.21□□□□□ -0.3
CMTM3-214ENST00000567572 YAE1D1Q9NRH1 226 aa13.21□□□□□ -0.3
CMTM3-214ENST00000567572 A0A0J9YX75 114 aa13.2□□□□□ -0.3
CMTM3-214ENST00000567572 A0A1W2PPM0 123 aa13.2□□□□□ -0.3
CMTM3-214ENST00000567572 H3BUT2 72 aa13.2□□□□□ -0.3
CMTM3-214ENST00000567572 K7EQG2 157 aa13.2□□□□□ -0.3
CMTM3-214ENST00000567572 GCSHP23434 173 aa13.2□□□□□ -0.3
CMTM3-214ENST00000567572 CEND1Q8N111 149 aa13.2□□□□□ -0.3
CMTM3-214ENST00000567572 CSTL1Q9H114 145 aa13.2□□□□□ -0.3
CMTM3-214ENST00000567572 TRBV6-5A0A0K0K1A5 114 aa13.19□□□□□ -0.3
CMTM3-214ENST00000567572 OR11H12B2RN74 326 aa13.19□□□□□ -0.3
CMTM3-214ENST00000567572 DUSP14O95147 198 aaKnown RBP13.19□□□□□ -0.3
CMTM3-214ENST00000567572 PAPPA-AS1Q5QFB9 102 aa13.19□□□□□ -0.3
CMTM3-214ENST00000567572 OR11H1Q8NG94 326 aa13.19□□□□□ -0.3
CMTM3-214ENST00000567572 OR11H2Q8NH07 326 aa13.19□□□□□ -0.3
CMTM3-214ENST00000567572 C9orf85Q96MD7 179 aa13.19□□□□□ -0.3
CMTM3-214ENST00000567572 JMJD8Q96S16 334 aa13.19□□□□□ -0.3
CMTM3-214ENST00000567572 CYSLTR1Q9Y271 337 aa13.19□□□□□ -0.3
CMTM3-214ENST00000567572 SONP18583 2426 aaKnown RBP13.19□□□□□ -0.3
CMTM3-214ENST00000567572 SYT8Q8NBV8 401 aa13.19□□□□□ -0.3
CMTM3-214ENST00000567572 BAALCQ8WXS3 180 aa13.19□□□□□ -0.3
CMTM3-214ENST00000567572 ESM1Q9NQ30 184 aa13.19□□□□□ -0.3
CMTM3-214ENST00000567572 VCYO14598 125 aa13.18□□□□□ -0.3
CMTM3-214ENST00000567572 POLR2KP53803 58 aaKnown RBP13.18□□□□□ -0.3
CMTM3-214ENST00000567572 OCIAD2Q56VL3 154 aa13.18□□□□□ -0.3
CMTM3-214ENST00000567572 Q6ZSV7 163 aa13.18□□□□□ -0.3
CMTM3-214ENST00000567572 TMEM238LA0A1B0GVL6 79 aa13.17□□□□□ -0.3
CMTM3-214ENST00000567572 CD7P09564 240 aa13.17□□□□□ -0.3
CMTM3-214ENST00000567572 FABP2P12104 132 aa13.17□□□□□ -0.3
CMTM3-214ENST00000567572 SRD5A1P18405 259 aa13.17□□□□□ -0.3
CMTM3-214ENST00000567572 HOXD3P31249 432 aaPredicted RBP13.17□□□□□ -0.3
CMTM3-214ENST00000567572 FXYD2P54710 66 aa13.17□□□□□ -0.3
CMTM3-214ENST00000567572 TMEM141Q96I45 108 aa13.17□□□□□ -0.3
CMTM3-214ENST00000567572 IGHV3-16A0A0C4DH30 117 aa13.17□□□□□ -0.3
CMTM3-214ENST00000567572 E9PLD3 99 aa13.17□□□□□ -0.3
CMTM3-214ENST00000567572 SUMO4Q6EEV6 95 aa13.17□□□□□ -0.3
CMTM3-214ENST00000567572 KIR2DL4Q99706 377 aa13.17□□□□□ -0.3
CMTM3-214ENST00000567572 TTTY13Q9BZ97 58 aa13.17□□□□□ -0.3
CMTM3-214ENST00000567572 FASNP49327 2511 aaKnown RBP13.17□□□□□ -0.3
CMTM3-214ENST00000567572 TRAV12-3A0A0B4J271 114 aa13.16□□□□□ -0.3
CMTM3-214ENST00000567572 K7ERU9 68 aa13.16□□□□□ -0.3
CMTM3-214ENST00000567572 RIPPLY3P57055 190 aa13.16□□□□□ -0.3
CMTM3-214ENST00000567572 SYNJ2BPP57105 145 aa13.16□□□□□ -0.3
CMTM3-214ENST00000567572 TCTEX1D4Q5JR98 221 aa13.16□□□□□ -0.3
CMTM3-214ENST00000567572 TIMM17AQ99595 171 aa13.16□□□□□ -0.3
CMTM3-214ENST00000567572 HECTD1Q9ULT8 2610 aa13.16□□□□□ -0.3
CMTM3-214ENST00000567572 TRBV27A0A0K0K1C4 114 aa13.15□□□□□ -0.3
CMTM3-214ENST00000567572 MYMXA0A1B0GTQ4 84 aa13.15□□□□□ -0.3
CMTM3-214ENST00000567572 ZNF688P0C7X2 276 aa13.15□□□□□ -0.3
CMTM3-214ENST00000567572 FOXI2Q6ZQN5 318 aa13.15□□□□□ -0.3
CMTM3-214ENST00000567572 MYO9AB2RTY4 2548 aa13.15□□□□□ -0.3
CMTM3-214ENST00000567572 SPRY2O43597 315 aa13.15□□□□□ -0.3
CMTM3-214ENST00000567572 SAMD5Q5TGI4 173 aa13.15□□□□□ -0.3
CMTM3-214ENST00000567572 C18orf65Q6ZTR6 163 aa13.15□□□□□ -0.3
CMTM3-214ENST00000567572 PHLDA1Q8WV24 401 aaPredicted RBP13.15□□□□□ -0.3
CMTM3-214ENST00000567572 SPCS1Q9Y6A9 102 aa13.15□□□□□ -0.3
CMTM3-214ENST00000567572 SELENOKQ9Y6D0 94 aa13.15□□□□□ -0.3
CMTM3-214ENST00000567572 ACANP16112 2415 aa13.14□□□□□ -0.31
CMTM3-214ENST00000567572 PRSS29PA6NIE9 313 aa13.14□□□□□ -0.31
CMTM3-214ENST00000567572 ZFP2Q6ZN57 461 aa13.14□□□□□ -0.31
CMTM3-214ENST00000567572 MAPKAPK5-AS1Q8N8E1 139 aa13.14□□□□□ -0.31
CMTM3-214ENST00000567572 ANK3Q12955 4377 aaKnown RBP13.14□□□□□ -0.31
CMTM3-214ENST00000567572 IGHV1OR15-1A0A075B7D0 117 aa13.13□□□□□ -0.31
CMTM3-214ENST00000567572 C4orf3Q8WVX3 66 aa13.13□□□□□ -0.31
CMTM3-214ENST00000567572 RAB37Q96AX2 223 aa13.13□□□□□ -0.31
CMTM3-214ENST00000567572 TRGV11A0A075B6L2 103 aa13.13□□□□□ -0.31
CMTM3-214ENST00000567572 IGIPA6NJ69 53 aa13.13□□□□□ -0.31
CMTM3-214ENST00000567572 TRAV2A0A0B4J234 112 aa13.12□□□□□ -0.31
CMTM3-214ENST00000567572 SCGB2A2Q13296 93 aa13.12□□□□□ -0.31
CMTM3-214ENST00000567572 RHOHQ15669 191 aa13.12□□□□□ -0.31
CMTM3-214ENST00000567572 DEFB136Q30KP8 78 aa13.12□□□□□ -0.31
CMTM3-214ENST00000567572 TP53TG1Q9Y2A0 90 aa13.12□□□□□ -0.31
CMTM3-214ENST00000567572 TRBV7-3A0A075B6L6 115 aa13.11□□□□□ -0.31
CMTM3-214ENST00000567572 SDHAF1A6NFY7 115 aa13.11□□□□□ -0.31
CMTM3-214ENST00000567572 RNASE1P07998 156 aaKnown RBP13.11□□□□□ -0.31
CMTM3-214ENST00000567572 ZNF256Q9Y2P7 627 aaPredicted RBP13.11□□□□□ -0.31
CMTM3-214ENST00000567572 A0A1B0GWB2 263 aa13.11□□□□□ -0.31
CMTM3-214ENST00000567572 HERVK_113P61574 105 aa13.11□□□□□ -0.31
CMTM3-214ENST00000567572 PMVKQ15126 192 aa13.11□□□□□ -0.31
CMTM3-214ENST00000567572 TRPT1Q86TN4 253 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 279.3 ms