RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 TOMM7Q9P0U1 55 aa8.82□□□□□ -1
CDH1-210ENST00000566612 LINC01619G3V211 115 aa8.82□□□□□ -1
CDH1-210ENST00000566612 ELANEP08246 267 aa8.82□□□□□ -1
CDH1-210ENST00000566612 DCHS1Q96JQ0 3298 aa8.82□□□□□ -1
CDH1-210ENST00000566612 FASNP49327 2511 aaKnown RBP8.82□□□□□ -1
CDH1-210ENST00000566612 IGHV4OR15-8A0A075B7B6 117 aa8.82□□□□□ -1
CDH1-210ENST00000566612 A0A087WW49 117 aa8.82□□□□□ -1
CDH1-210ENST00000566612 H3BRM9 83 aa8.82□□□□□ -1
CDH1-210ENST00000566612 MRPS12O15235 138 aaKnown RBP8.82□□□□□ -1
CDH1-210ENST00000566612 ZNF415Q09FC8 603 aa8.82□□□□□ -1
CDH1-210ENST00000566612 Q8N976 141 aa8.82□□□□□ -1
CDH1-210ENST00000566612 C11orf21Q9P2W6 132 aa8.82□□□□□ -1
CDH1-210ENST00000566612 TRAV8-2A0A0B4J237 113 aa8.82□□□□□ -1
CDH1-210ENST00000566612 C9orf118A6NHY6 69 aa8.82□□□□□ -1
CDH1-210ENST00000566612 J3QLI3 93 aa8.82□□□□□ -1
CDH1-210ENST00000566612 HLA-DRB4P13762 266 aa8.82□□□□□ -1
CDH1-210ENST00000566612 RNASE13Q5GAN3 156 aaKnown RBP8.82□□□□□ -1
CDH1-210ENST00000566612 OR5A1Q8NGJ0 315 aa8.82□□□□□ -1
CDH1-210ENST00000566612 C20orf78Q9BR46 151 aa8.82□□□□□ -1
CDH1-210ENST00000566612 CST9LQ9H4G1 147 aa8.82□□□□□ -1
CDH1-210ENST00000566612 HLA-DRB4X5D2U9 266 aa8.82□□□□□ -1
CDH1-210ENST00000566612 TRBV25-1A0A075B6N4 114 aa8.81□□□□□ -1
CDH1-210ENST00000566612 CIRBPQ14011 172 aaKnown RBP8.81□□□□□ -1
CDH1-210ENST00000566612 TRPT1Q86TN4 253 aaKnown RBP8.81□□□□□ -1
CDH1-210ENST00000566612 PGPEP1Q9NXJ5 209 aa8.81□□□□□ -1
CDH1-210ENST00000566612 TMEM262E9PQX1 116 aa8.81□□□□□ -1
CDH1-210ENST00000566612 COX6CP09669 75 aa8.81□□□□□ -1
CDH1-210ENST00000566612 HIST2H2BDQ6DRA6 164 aa8.81□□□□□ -1
CDH1-210ENST00000566612 APRG1Q8IVJ8 170 aa8.81□□□□□ -1
CDH1-210ENST00000566612 RPL13AP40429 203 aaKnown RBP8.81□□□□□ -1
CDH1-210ENST00000566612 PMVKQ15126 192 aa8.81□□□□□ -1
CDH1-210ENST00000566612 LGALS1P09382 135 aaKnown RBP8.8□□□□□ -1
CDH1-210ENST00000566612 ZFHX4Q86UP3 3567 aa8.8□□□□□ -1
CDH1-210ENST00000566612 ODF1Q14990 250 aa8.8□□□□□ -1
CDH1-210ENST00000566612 TAX1BP3O14907 124 aa8.8□□□□□ -1
CDH1-210ENST00000566612 RPL39P62891 51 aaKnown RBP8.8□□□□□ -1
CDH1-210ENST00000566612 MDFICQ9P1T7 246 aa8.8□□□□□ -1
CDH1-210ENST00000566612 MYMXA0A1B0GTQ4 84 aa8.79□□□□□ -1
CDH1-210ENST00000566612 CLPSL1A2RUU4 121 aa8.79□□□□□ -1
CDH1-210ENST00000566612 CRXO43186 299 aaPredicted RBP8.79□□□□□ -1
CDH1-210ENST00000566612 INSP01308 110 aa8.79□□□□□ -1
CDH1-210ENST00000566612 CFHR3Q02985 330 aa8.79□□□□□ -1
CDH1-210ENST00000566612 GAGE13Q4V321 117 aa8.79□□□□□ -1
CDH1-210ENST00000566612 Q8N1Y9 231 aa8.79□□□□□ -1
CDH1-210ENST00000566612 ATP6V0BQ99437 205 aa8.79□□□□□ -1
CDH1-210ENST00000566612 SUMO4Q6EEV6 95 aa8.79□□□□□ -1
CDH1-210ENST00000566612 AMTNQ6UX39 209 aa8.79□□□□□ -1
CDH1-210ENST00000566612 TRGV4A0A0C4DH28 118 aa8.79□□□□□ -1
CDH1-210ENST00000566612 OCIAD2Q56VL3 154 aa8.79□□□□□ -1
CDH1-210ENST00000566612 GATD1Q8NB37 220 aa8.79□□□□□ -1
CDH1-210ENST00000566612 LINC01549A6NIU2 74 aa8.78□□□□□ -1
CDH1-210ENST00000566612 AVPP01185 164 aa8.78□□□□□ -1
CDH1-210ENST00000566612 RNF185Q96GF1 192 aa8.78□□□□□ -1
CDH1-210ENST00000566612 DMXL1Q9Y485 3027 aa8.78□□□□□ -1
CDH1-210ENST00000566612 PRR9Q5T870 116 aa8.78□□□□□ -1
CDH1-210ENST00000566612 FXYD2P54710 66 aa8.78□□□□□ -1
CDH1-210ENST00000566612 GPHB5Q86YW7 130 aa8.78□□□□□ -1
CDH1-210ENST00000566612 KALRNO60229 2985 aa8.78□□□□□ -1
CDH1-210ENST00000566612 TRAV13-1A0A0B4J241 112 aa8.78□□□□□ -1
CDH1-210ENST00000566612 I3L3M4 83 aa8.78□□□□□ -1
CDH1-210ENST00000566612 K7EP13 123 aa8.78□□□□□ -1
CDH1-210ENST00000566612 DEFB113Q30KQ7 82 aa8.78□□□□□ -1
CDH1-210ENST00000566612 BOD1L2Q8IYS8 172 aa8.78□□□□□ -1
CDH1-210ENST00000566612 TMEM101Q96IK0 257 aa8.78□□□□□ -1
CDH1-210ENST00000566612 LAMA5O15230 3695 aa8.77□□□□□ -1
CDH1-210ENST00000566612 ADARB2-AS1A8MUL3 147 aa8.77□□□□□ -1.01
CDH1-210ENST00000566612 SMAGPQ0VAQ4 97 aa8.77□□□□□ -1.01
CDH1-210ENST00000566612 ZNF625Q96I27 306 aaPredicted RBP8.77□□□□□ -1.01
CDH1-210ENST00000566612 CEND1Q8N111 149 aa8.77□□□□□ -1.01
CDH1-210ENST00000566612 ZFAND2AQ8N6M9 145 aa8.77□□□□□ -1.01
CDH1-210ENST00000566612 A0A1W2PPM0 123 aa8.77□□□□□ -1.01
CDH1-210ENST00000566612 K7EMT4 169 aa8.76□□□□□ -1.01
CDH1-210ENST00000566612 FOXI2Q6ZQN5 318 aa8.76□□□□□ -1.01
CDH1-210ENST00000566612 SIVA1O15304 175 aa8.76□□□□□ -1.01
CDH1-210ENST00000566612 HTN3P15516 51 aa8.76□□□□□ -1.01
CDH1-210ENST00000566612 RPL36AP83881 106 aaKnown RBP8.76□□□□□ -1.01
CDH1-210ENST00000566612 RPL36ALQ969Q0 106 aaKnown RBP8.76□□□□□ -1.01
CDH1-210ENST00000566612 EDN2P20800 178 aa8.76□□□□□ -1.01
CDH1-210ENST00000566612 ADAMTSL5Q6ZMM2 481 aa8.76□□□□□ -1.01
CDH1-210ENST00000566612 RNASE8Q8TDE3 154 aaKnown RBP8.76□□□□□ -1.01
CDH1-210ENST00000566612 H3BMG7 143 aa8.75□□□□□ -1.01
CDH1-210ENST00000566612 ZFP2Q6ZN57 461 aa8.75□□□□□ -1.01
CDH1-210ENST00000566612 TIMM21Q9BVV7 248 aa8.75□□□□□ -1.01
CDH1-210ENST00000566612 TACC2O95359 2948 aa8.75□□□□□ -1.01
CDH1-210ENST00000566612 ETDBQ3ZM63 59 aa8.75□□□□□ -1.01
CDH1-210ENST00000566612 ZNRF2Q8NHG8 242 aa8.75□□□□□ -1.01
CDH1-210ENST00000566612 TMEM141Q96I45 108 aa8.75□□□□□ -1.01
CDH1-210ENST00000566612 CHCHD5Q9BSY4 110 aa8.75□□□□□ -1.01
CDH1-210ENST00000566612 IGHG4P01861 327 aa8.75□□□□□ -1.01
CDH1-210ENST00000566612 SRSF2Q01130 221 aaKnown RBP8.75□□□□□ -1.01
CDH1-210ENST00000566612 RASL10AQ92737 203 aa8.75□□□□□ -1.01
CDH1-210ENST00000566612 ERG28Q9UKR5 140 aa8.75□□□□□ -1.01
CDH1-210ENST00000566612 IGKV2D-26A0A0A0MRZ7 120 aa8.74□□□□□ -1.01
CDH1-210ENST00000566612 GAGE12JA6NER3 117 aa8.74□□□□□ -1.01
CDH1-210ENST00000566612 K7EP34 96 aa8.74□□□□□ -1.01
CDH1-210ENST00000566612 GAGE4Q13068 117 aa8.74□□□□□ -1.01
CDH1-210ENST00000566612 GAGE5Q13069 117 aa8.74□□□□□ -1.01
CDH1-210ENST00000566612 A0A0J9YX75 114 aa8.74□□□□□ -1.01
CDH1-210ENST00000566612 DEFB130BP0DP73 79 aa8.74□□□□□ -1.01
CDH1-210ENST00000566612 DEFB130AP0DP74 79 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms