RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 UMAD1C9J7I0 102 aa2.16□□□□□ -2.06
CNOT1-209ENST00000566240 ATP6V1G2-DDX39BF2Z307 99 aa2.16□□□□□ -2.06
CNOT1-209ENST00000566240 C17orf112F2Z3M2 114 aa2.16□□□□□ -2.06
CNOT1-209ENST00000566240 BUB1B-PAK6H3BSN5 160 aa2.16□□□□□ -2.06
CNOT1-209ENST00000566240 NDUFB3O43676 98 aa2.16□□□□□ -2.06
CNOT1-209ENST00000566240 PITX3O75364 302 aa2.16□□□□□ -2.06
CNOT1-209ENST00000566240 NAPSAO96009 420 aa2.16□□□□□ -2.06
CNOT1-209ENST00000566240 SLC25A6P12236 298 aa2.16□□□□□ -2.06
CNOT1-209ENST00000566240 ZNF80P51504 273 aaPredicted RBP2.16□□□□□ -2.06
CNOT1-209ENST00000566240 FXYD2P54710 66 aa2.16□□□□□ -2.06
CNOT1-209ENST00000566240 RTL8BQ17RB0 113 aa2.16□□□□□ -2.06
CNOT1-209ENST00000566240 MYO7BQ6PIF6 2116 aa2.16□□□□□ -2.06
CNOT1-209ENST00000566240 DPPA3Q6W0C5 159 aa2.16□□□□□ -2.06
CNOT1-209ENST00000566240 BPIFA4PQ86YQ2 179 aa2.16□□□□□ -2.06
CNOT1-209ENST00000566240 SVBPQ8N300 66 aa2.16□□□□□ -2.06
CNOT1-209ENST00000566240 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.16□□□□□ -2.06
CNOT1-209ENST00000566240 ST6GALNAC3Q8NDV1 305 aa2.16□□□□□ -2.06
CNOT1-209ENST00000566240 MED9Q9NWA0 146 aa2.16□□□□□ -2.06
CNOT1-209ENST00000566240 CYSLTR1Q9Y271 337 aa2.16□□□□□ -2.06
CNOT1-209ENST00000566240 AMMECR1Q9Y4X0 333 aaPredicted RBP2.16□□□□□ -2.06
CNOT1-209ENST00000566240 MED13Q9UHV7 2174 aa2.16□□□□□ -2.06
CNOT1-209ENST00000566240 CACNA1GO43497 2377 aa2.15□□□□□ -2.06
CNOT1-209ENST00000566240 MED12Q93074 2177 aa2.15□□□□□ -2.07
CNOT1-209ENST00000566240 LAMA2P24043 3122 aaKnown RBP2.15□□□□□ -2.07
CNOT1-209ENST00000566240 TRAV14DV4A0A0A6YYC5 116 aa2.15□□□□□ -2.07
CNOT1-209ENST00000566240 ODAMA1E959 279 aa2.15□□□□□ -2.07
CNOT1-209ENST00000566240 CEBPZOSA8MTT3 80 aa2.15□□□□□ -2.07
CNOT1-209ENST00000566240 CYB5BO43169 146 aa2.15□□□□□ -2.07
CNOT1-209ENST00000566240 NDUFA2O43678 99 aa2.15□□□□□ -2.07
CNOT1-209ENST00000566240 IFNA17P01571 189 aa2.15□□□□□ -2.07
CNOT1-209ENST00000566240 SCTP09683 121 aa2.15□□□□□ -2.07
CNOT1-209ENST00000566240 TRGC1P0CF51 173 aa2.15□□□□□ -2.07
CNOT1-209ENST00000566240 NFYBP25208 207 aa2.15□□□□□ -2.07
CNOT1-209ENST00000566240 PEA15Q15121 130 aa2.15□□□□□ -2.07
CNOT1-209ENST00000566240 LTC4SQ16873 150 aa2.15□□□□□ -2.07
CNOT1-209ENST00000566240 ZNF818PQ6ZRF7 136 aa2.15□□□□□ -2.07
CNOT1-209ENST00000566240 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.15□□□□□ -2.07
CNOT1-209ENST00000566240 OR8B3Q8NGG8 313 aa2.15□□□□□ -2.07
CNOT1-209ENST00000566240 VSTM2AQ8TAG5 236 aa2.15□□□□□ -2.07
CNOT1-209ENST00000566240 LSM10Q969L4 123 aaKnown RBP2.15□□□□□ -2.07
CNOT1-209ENST00000566240 ZNF714Q96N38 554 aa2.15□□□□□ -2.07
CNOT1-209ENST00000566240 TP53RKQ96S44 253 aa2.15□□□□□ -2.07
CNOT1-209ENST00000566240 SMIM3Q9BZL3 60 aa2.15□□□□□ -2.07
CNOT1-209ENST00000566240 LYRM2Q9NU23 88 aaPredicted RBP2.15□□□□□ -2.07
CNOT1-209ENST00000566240 COA4Q9NYJ1 87 aa2.15□□□□□ -2.07
CNOT1-209ENST00000566240 PSENENQ9NZ42 101 aa2.15□□□□□ -2.07
CNOT1-209ENST00000566240 HEATR1Q9H583 2144 aaKnown RBP2.15□□□□□ -2.07
CNOT1-209ENST00000566240 UBE2L5PA0A1B0GUS4 154 aa2.14□□□□□ -2.07
CNOT1-209ENST00000566240 F8W036 122 aa2.14□□□□□ -2.07
CNOT1-209ENST00000566240 YPEL1O60688 119 aa2.14□□□□□ -2.07
CNOT1-209ENST00000566240 NMBP08949 121 aa2.14□□□□□ -2.07
CNOT1-209ENST00000566240 SMIM17P0DL12 118 aa2.14□□□□□ -2.07
CNOT1-209ENST00000566240 GNG10P50151 68 aa2.14□□□□□ -2.07
CNOT1-209ENST00000566240 DEFA5Q01523 94 aa2.14□□□□□ -2.07
CNOT1-209ENST00000566240 VMA21Q3ZAQ7 101 aa2.14□□□□□ -2.07
CNOT1-209ENST00000566240 TMEM155Q4W5P6 130 aa2.14□□□□□ -2.07
CNOT1-209ENST00000566240 SPANXN5Q5MJ07 72 aa2.14□□□□□ -2.07
CNOT1-209ENST00000566240 FAM74A1Q5RGS3 127 aa2.14□□□□□ -2.07
CNOT1-209ENST00000566240 ZNF826PQ6ZT77 177 aa2.14□□□□□ -2.07
CNOT1-209ENST00000566240 MIR17HGQ75NE6 70 aa2.14□□□□□ -2.07
CNOT1-209ENST00000566240 FAM213BQ8TBF2 198 aa2.14□□□□□ -2.07
CNOT1-209ENST00000566240 YPEL2Q96QA6 119 aa2.14□□□□□ -2.07
CNOT1-209ENST00000566240 HSPB9Q9BQS6 159 aa2.14□□□□□ -2.07
CNOT1-209ENST00000566240 C19orf12Q9NSK7 152 aa2.14□□□□□ -2.07
CNOT1-209ENST00000566240 SLC39A9Q9NUM3 307 aa2.14□□□□□ -2.07
CNOT1-209ENST00000566240 FKBP11Q9NYL4 201 aa2.14□□□□□ -2.07
CNOT1-209ENST00000566240 OR5AC2Q9NZP5 309 aa2.14□□□□□ -2.07
CNOT1-209ENST00000566240 PRNDQ9UKY0 176 aa2.14□□□□□ -2.07
CNOT1-209ENST00000566240 LINC00312Q9Y6C7 94 aa2.14□□□□□ -2.07
CNOT1-209ENST00000566240 FREM1Q5H8C1 2179 aa2.14□□□□□ -2.07
CNOT1-209ENST00000566240 INTS1Q8N201 2190 aaKnown RBP2.14□□□□□ -2.07
CNOT1-209ENST00000566240 LAMA3Q16787 3333 aa2.14□□□□□ -2.07
CNOT1-209ENST00000566240 ICE1Q9Y2F5 2266 aa2.14□□□□□ -2.07
CNOT1-209ENST00000566240 CORTO00230 105 aa2.13□□□□□ -2.07
CNOT1-209ENST00000566240 APOC3P02656 99 aa2.13□□□□□ -2.07
CNOT1-209ENST00000566240 GYPAP02724 150 aa2.13□□□□□ -2.07
CNOT1-209ENST00000566240 RBP4P02753 201 aa2.13□□□□□ -2.07
CNOT1-209ENST00000566240 IFNA4P05014 189 aa2.13□□□□□ -2.07
CNOT1-209ENST00000566240 FABP1P07148 127 aa2.13□□□□□ -2.07
CNOT1-209ENST00000566240 IAPPP10997 89 aa2.13□□□□□ -2.07
CNOT1-209ENST00000566240 FGF7P21781 194 aa2.13□□□□□ -2.07
CNOT1-209ENST00000566240 SNCAP37840 140 aa2.13□□□□□ -2.07
CNOT1-209ENST00000566240 CCL8P80075 99 aa2.13□□□□□ -2.07
CNOT1-209ENST00000566240 RPL19P84098 196 aaKnown RBP2.13□□□□□ -2.07
CNOT1-209ENST00000566240 SERF2P84101 59 aa2.13□□□□□ -2.07
CNOT1-209ENST00000566240 PLGLAQ15195 96 aa2.13□□□□□ -2.07
CNOT1-209ENST00000566240 Q5BKY6 102 aa2.13□□□□□ -2.07
CNOT1-209ENST00000566240 NMSQ5H8A3 153 aa2.13□□□□□ -2.07
CNOT1-209ENST00000566240 NCMAPQ5T1S8 102 aa2.13□□□□□ -2.07
CNOT1-209ENST00000566240 RPL7L1Q6DKI1 246 aaKnown RBP2.13□□□□□ -2.07
CNOT1-209ENST00000566240 DEFB108BQ8NET1 73 aa2.13□□□□□ -2.07
CNOT1-209ENST00000566240 OR11H6Q8NGC7 330 aa2.13□□□□□ -2.07
CNOT1-209ENST00000566240 GINS3Q9BRX5 216 aa2.13□□□□□ -2.07
CNOT1-209ENST00000566240 PSMG3Q9BT73 122 aaPredicted RBP2.13□□□□□ -2.07
CNOT1-209ENST00000566240 MANBALQ9NQG1 85 aa2.13□□□□□ -2.07
CNOT1-209ENST00000566240 CBLN4Q9NTU7 201 aa2.13□□□□□ -2.07
CNOT1-209ENST00000566240 ALPK2Q86TB3 2170 aa2.13□□□□□ -2.07
CNOT1-209ENST00000566240 SZT2Q5T011 3432 aa2.13□□□□□ -2.07
CNOT1-209ENST00000566240 AHCTF1Q8WYP5 2266 aa2.12□□□□□ -2.07
CNOT1-209ENST00000566240 CNTRLQ7Z7A1 2325 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms