RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 C14orf178Q8N769 122 aaPredicted RBP13.28□□□□□ -0.28
CLN6-206ENST00000565471 SFRP2Q96HF1 295 aa13.28□□□□□ -0.28
CLN6-206ENST00000565471 S100A9P06702 114 aaKnown RBP13.27□□□□□ -0.29
CLN6-206ENST00000565471 SFT2D1Q8WV19 159 aa13.27□□□□□ -0.29
CLN6-206ENST00000565471 Q9UF83 564 aa13.27□□□□□ -0.29
CLN6-206ENST00000565471 IGLV5-52A0A0A0MRZ9 124 aa13.26□□□□□ -0.29
CLN6-206ENST00000565471 A0A0D9SG52 128 aa13.26□□□□□ -0.29
CLN6-206ENST00000565471 FAM74A4Q5TZK3 123 aa13.26□□□□□ -0.29
CLN6-206ENST00000565471 ZFP82Q8N141 532 aa13.26□□□□□ -0.29
CLN6-206ENST00000565471 Q8N814 137 aa13.26□□□□□ -0.29
CLN6-206ENST00000565471 FAM213BQ8TBF2 198 aa13.26□□□□□ -0.29
CLN6-206ENST00000565471 TM2D2Q9BX73 214 aa13.26□□□□□ -0.29
CLN6-206ENST00000565471 TMSB15BA0A087X1C1 80 aa13.25□□□□□ -0.29
CLN6-206ENST00000565471 BCL2L11O43521 198 aa13.25□□□□□ -0.29
CLN6-206ENST00000565471 Q8N3U1 123 aa13.25□□□□□ -0.29
CLN6-206ENST00000565471 TRAV8-3A0A0A6YYJ7 113 aa13.24□□□□□ -0.29
CLN6-206ENST00000565471 KANTRA0A1W2PQU2 76 aa13.24□□□□□ -0.29
CLN6-206ENST00000565471 M0R381 172 aa13.24□□□□□ -0.29
CLN6-206ENST00000565471 TOR2AQ5JU69 321 aa13.24□□□□□ -0.29
CLN6-206ENST00000565471 ZNF471Q9BX82 626 aaPredicted RBP13.24□□□□□ -0.29
CLN6-206ENST00000565471 A0A087WWL8 130 aa13.23□□□□□ -0.29
CLN6-206ENST00000565471 TRBV10-1A0A0K0K1A3 114 aa13.23□□□□□ -0.29
CLN6-206ENST00000565471 PFDN1O60925 122 aa13.23□□□□□ -0.29
CLN6-206ENST00000565471 CXCL1P09341 107 aa13.23□□□□□ -0.29
CLN6-206ENST00000565471 EIF5AP63241 154 aaKnown RBP13.23□□□□□ -0.29
CLN6-206ENST00000565471 SCO2A0A1W2PP80 73 aa13.22□□□□□ -0.29
CLN6-206ENST00000565471 DAZ4Q86SG3 579 aaKnown RBP13.22□□□□□ -0.29
CLN6-206ENST00000565471 TMEM70Q9BUB7 260 aa13.22□□□□□ -0.29
CLN6-206ENST00000565471 MLST8Q9BVC4 326 aa13.22□□□□□ -0.29
CLN6-206ENST00000565471 DAZ3Q9NR90 486 aaKnown RBP13.22□□□□□ -0.29
CLN6-206ENST00000565471 A0A1B0GV50 99 aa13.21□□□□□ -0.29
CLN6-206ENST00000565471 H2AFB1P0C5Y9 115 aa13.21□□□□□ -0.29
CLN6-206ENST00000565471 FRZBQ92765 325 aa13.21□□□□□ -0.29
CLN6-206ENST00000565471 Q5VSD8 79 aa13.2□□□□□ -0.3
CLN6-206ENST00000565471 BAGE2Q86Y30 109 aa13.2□□□□□ -0.3
CLN6-206ENST00000565471 RPL36AP83881 106 aaKnown RBP13.19□□□□□ -0.3
CLN6-206ENST00000565471 NIT1Q86X76 327 aa13.19□□□□□ -0.3
CLN6-206ENST00000565471 RPL36ALQ969Q0 106 aaKnown RBP13.19□□□□□ -0.3
CLN6-206ENST00000565471 COX11Q9Y6N1 276 aa13.19□□□□□ -0.3
CLN6-206ENST00000565471 URGCP-MRPS24S4R325 110 aa13.19□□□□□ -0.3
CLN6-206ENST00000565471 UBE2D3P61077 147 aa13.18□□□□□ -0.3
CLN6-206ENST00000565471 UBE2D2P62837 147 aa13.18□□□□□ -0.3
CLN6-206ENST00000565471 RPL19P84098 196 aaKnown RBP13.18□□□□□ -0.3
CLN6-206ENST00000565471 OR10G8Q8NGN5 311 aa13.18□□□□□ -0.3
CLN6-206ENST00000565471 CHCHD7Q9BUK0 85 aa13.18□□□□□ -0.3
CLN6-206ENST00000565471 SSBP4Q9BWG4 385 aaPredicted RBP13.18□□□□□ -0.3
CLN6-206ENST00000565471 TRBV7-3A0A075B6L6 115 aa13.17□□□□□ -0.3
CLN6-206ENST00000565471 SNAI2O43623 268 aa13.17□□□□□ -0.3
CLN6-206ENST00000565471 C1QBP02746 253 aa13.17□□□□□ -0.3
CLN6-206ENST00000565471 RAB4BP61018 213 aa13.17□□□□□ -0.3
CLN6-206ENST00000565471 WFDC2Q14508 124 aa13.17□□□□□ -0.3
CLN6-206ENST00000565471 TMUB2Q71RG4 321 aa13.17□□□□□ -0.3
CLN6-206ENST00000565471 OR10AG1Q8NH19 301 aa13.17□□□□□ -0.3
CLN6-206ENST00000565471 RMI2Q96E14 147 aa13.17□□□□□ -0.3
CLN6-206ENST00000565471 OR5AL1P0C617 328 aa13.16□□□□□ -0.3
CLN6-206ENST00000565471 INAFM2P0DMQ5 153 aa13.16□□□□□ -0.3
CLN6-206ENST00000565471 MANBALQ9NQG1 85 aa13.16□□□□□ -0.3
CLN6-206ENST00000565471 TRAV1-1A0A0B4J248 108 aa13.15□□□□□ -0.3
CLN6-206ENST00000565471 PRR27Q6MZM9 219 aa13.15□□□□□ -0.3
CLN6-206ENST00000565471 C11orf52Q96A22 123 aa13.15□□□□□ -0.3
CLN6-206ENST00000565471 A0A087WX48 190 aa13.14□□□□□ -0.31
CLN6-206ENST00000565471 RPL35P42766 123 aaKnown RBP13.14□□□□□ -0.31
CLN6-206ENST00000565471 ELOBQ15370 118 aa13.14□□□□□ -0.31
CLN6-206ENST00000565471 ZNF56Q15929 161 aa13.14□□□□□ -0.31
CLN6-206ENST00000565471 SMR3BP02814 79 aaPredicted RBP13.13□□□□□ -0.31
CLN6-206ENST00000565471 RAB5CP51148 216 aa13.13□□□□□ -0.31
CLN6-206ENST00000565471 SPANXN1Q5VSR9 72 aa13.13□□□□□ -0.31
CLN6-206ENST00000565471 KCNIP4Q6PIL6 250 aa13.13□□□□□ -0.31
CLN6-206ENST00000565471 NEXN-AS1Q8NBZ9 246 aa13.13□□□□□ -0.31
CLN6-206ENST00000565471 KLK12Q9UKR0 248 aa13.13□□□□□ -0.31
CLN6-206ENST00000565471 CCL20P78556 96 aa13.12□□□□□ -0.31
CLN6-206ENST00000565471 HAMPP81172 84 aa13.12□□□□□ -0.31
CLN6-206ENST00000565471 EIF5AL1Q6IS14 154 aaKnown RBP13.12□□□□□ -0.31
CLN6-206ENST00000565471 GNG13Q9P2W3 67 aa13.12□□□□□ -0.31
CLN6-206ENST00000565471 TRBV6-8A0A0A6YYG3 113 aa13.11□□□□□ -0.31
CLN6-206ENST00000565471 FAM229AH3BQW9 127 aa13.11□□□□□ -0.31
CLN6-206ENST00000565471 LECT2O14960 151 aa13.11□□□□□ -0.31
CLN6-206ENST00000565471 ATRAIDQ6UW56 229 aa13.11□□□□□ -0.31
CLN6-206ENST00000565471 BAALCQ8WXS3 180 aa13.11□□□□□ -0.31
CLN6-206ENST00000565471 DERL1Q9BUN8 251 aa13.11□□□□□ -0.31
CLN6-206ENST00000565471 FAM30AQ9NZY2 134 aa13.11□□□□□ -0.31
CLN6-206ENST00000565471 IGKV2D-24A0A075B6R9 120 aa13.1□□□□□ -0.31
CLN6-206ENST00000565471 TEX46H3BTG2 121 aa13.1□□□□□ -0.31
CLN6-206ENST00000565471 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.1□□□□□ -0.31
CLN6-206ENST00000565471 UBE2WQ96B02 151 aa13.1□□□□□ -0.31
CLN6-206ENST00000565471 DNAJC30Q96LL9 226 aa13.1□□□□□ -0.31
CLN6-206ENST00000565471 MUC21A0A0G2JKD1 596 aa13.09□□□□□ -0.31
CLN6-206ENST00000565471 MUC21A0A140T8X8 626 aa13.09□□□□□ -0.31
CLN6-206ENST00000565471 Q0VG73 95 aa13.09□□□□□ -0.31
CLN6-206ENST00000565471 Q6ZSA8 131 aa13.09□□□□□ -0.31
CLN6-206ENST00000565471 Q8N976 141 aa13.09□□□□□ -0.31
CLN6-206ENST00000565471 AP1S3Q96PC3 154 aa13.09□□□□□ -0.31
CLN6-206ENST00000565471 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.08□□□□□ -0.32
CLN6-206ENST00000565471 RBFOX3A6NFN3 312 aa13.08□□□□□ -0.32
CLN6-206ENST00000565471 F5H697 171 aa13.08□□□□□ -0.32
CLN6-206ENST00000565471 SULT1A2P50226 295 aa13.08□□□□□ -0.32
CLN6-206ENST00000565471 CENPWQ5EE01 88 aa13.08□□□□□ -0.32
CLN6-206ENST00000565471 SMIM12Q96EX1 92 aa13.08□□□□□ -0.32
CLN6-206ENST00000565471 KIF25-AS1Q9Y6Z4 181 aa13.08□□□□□ -0.32
CLN6-206ENST00000565471 FAT1Q14517 4588 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms