RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 SUPT4H1P63272 117 aaKnown RBP1□□□□□ -2.25
PALB2-203ENST00000565038 OR8B8Q15620 311 aa1□□□□□ -2.25
PALB2-203ENST00000565038 NDUFA5Q16718 116 aa1□□□□□ -2.25
PALB2-203ENST00000565038 LTC4SQ16873 150 aa1□□□□□ -2.25
PALB2-203ENST00000565038 RGS21Q2M5E4 152 aa1□□□□□ -2.25
PALB2-203ENST00000565038 ACOT6Q3I5F7 207 aaPredicted RBP1□□□□□ -2.25
PALB2-203ENST00000565038 TEX36Q5VZQ5 186 aa1□□□□□ -2.25
PALB2-203ENST00000565038 DEFB107AQ8IZN7 70 aa1□□□□□ -2.25
PALB2-203ENST00000565038 WFDC9Q8NEX5 89 aa1□□□□□ -2.25
PALB2-203ENST00000565038 OR4S1Q8NGB4 309 aa1□□□□□ -2.25
PALB2-203ENST00000565038 OR8J3Q8NGG0 315 aa1□□□□□ -2.25
PALB2-203ENST00000565038 OR8B3Q8NGG8 313 aa1□□□□□ -2.25
PALB2-203ENST00000565038 CANT1Q8WVQ1 401 aa1□□□□□ -2.25
PALB2-203ENST00000565038 AQP3Q92482 292 aa1□□□□□ -2.25
PALB2-203ENST00000565038 H1FXQ92522 213 aaKnown RBP1□□□□□ -2.25
PALB2-203ENST00000565038 ADAT3Q96EY9 351 aaPredicted RBP1□□□□□ -2.25
PALB2-203ENST00000565038 CMSS1Q9BQ75 279 aaKnown RBP1□□□□□ -2.25
PALB2-203ENST00000565038 NAA38Q9BRA0 125 aaKnown RBP1□□□□□ -2.25
PALB2-203ENST00000565038 DERL1Q9BUN8 251 aa1□□□□□ -2.25
PALB2-203ENST00000565038 TMEM147Q9BVK8 224 aa1□□□□□ -2.25
PALB2-203ENST00000565038 CHST6Q9GZX3 395 aa1□□□□□ -2.25
PALB2-203ENST00000565038 PBOV1Q9GZY1 135 aa1□□□□□ -2.25
PALB2-203ENST00000565038 CACYBPQ9HB71 228 aaKnown RBP1□□□□□ -2.25
PALB2-203ENST00000565038 IL20Q9NYY1 176 aa1□□□□□ -2.25
PALB2-203ENST00000565038 FAM32AQ9Y421 112 aaKnown RBP1□□□□□ -2.25
PALB2-203ENST00000565038 HILPDAQ9Y5L2 63 aa1□□□□□ -2.25
PALB2-203ENST00000565038 VPS13BQ7Z7G8 4022 aa1□□□□□ -2.25
PALB2-203ENST00000565038 LRP1Q07954 4544 aaKnown RBP1□□□□□ -2.25
PALB2-203ENST00000565038 DOCK11Q5JSL3 2073 aa1□□□□□ -2.25
PALB2-203ENST00000565038 TRAV9-1A0A075B6T8 112 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 TRBV10-2A0A0K0K1G8 114 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 TCRBV4S1A1TA0A5B7 111 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 PQLC2LA1A4F0 135 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 IRGMA1A4Y4 181 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 SMIM9A6NGZ8 99 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 SDCBPO00560 298 aaPredicted RBP0.99□□□□□ -2.25
PALB2-203ENST00000565038 IFNA14P01570 189 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 IGKV1-5P01602 117 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 IGLV3-1P01715 115 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 TTRP02766 147 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 GTF2A1P52655 376 aaPredicted RBP0.99□□□□□ -2.25
PALB2-203ENST00000565038 DEFA3P59666 94 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 AP3S2P59780 193 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 RANP62826 216 aaKnown RBP0.99□□□□□ -2.25
PALB2-203ENST00000565038 CCL20P78556 96 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 CDK10Q15131 360 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 KISS1Q15726 138 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 RPL22L1Q6P5R6 122 aaKnown RBP0.99□□□□□ -2.25
PALB2-203ENST00000565038 CROCCP2Q86T23 111 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 SBSPONQ8IVN8 264 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 C1orf158Q8N1D5 194 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 OR5A2Q8NGI9 324 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 OR51A4Q8NGJ6 313 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 OR10K1Q8NGX5 313 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 LZICQ8WZA0 190 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 SPTSSAQ969W0 71 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 DGCR14Q96DF8 476 aaKnown RBP0.99□□□□□ -2.25
PALB2-203ENST00000565038 GPX7Q96SL4 187 aaPredicted RBP0.99□□□□□ -2.25
PALB2-203ENST00000565038 HSPB9Q9BQS6 159 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 ADAT1Q9BUB4 502 aaKnown RBP0.99□□□□□ -2.25
PALB2-203ENST00000565038 CCDC90BQ9GZT6 254 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 TLNRD1Q9H1K6 362 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 KAAG1Q9UBP8 84 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 TP73-AS1Q9UF72 201 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 OR52A1Q9UKL2 312 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 PRELID3BQ9Y3B1 194 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 PKHD1P08F94 4074 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 TANC2Q9HCD6 1990 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 STAB2Q8WWQ8 2551 aa0.99□□□□□ -2.25
PALB2-203ENST00000565038 BBIP1A8MTZ0 92 aa0.98□□□□□ -2.25
PALB2-203ENST00000565038 J3QLW9 94 aa0.98□□□□□ -2.25
PALB2-203ENST00000565038 J3QRK9 145 aa0.98□□□□□ -2.25
PALB2-203ENST00000565038 GNGT2O14610 69 aa0.98□□□□□ -2.25
PALB2-203ENST00000565038 DEGS1O15121 323 aa0.98□□□□□ -2.25
PALB2-203ENST00000565038 PIN1P1O15428 100 aa0.98□□□□□ -2.25
PALB2-203ENST00000565038 NDUFA2O43678 99 aa0.98□□□□□ -2.25
PALB2-203ENST00000565038 NFYAP23511 347 aaPredicted RBP0.98□□□□□ -2.25
PALB2-203ENST00000565038 NFYBP25208 207 aa0.98□□□□□ -2.25
PALB2-203ENST00000565038 EDDM3BP56851 147 aa0.98□□□□□ -2.25
PALB2-203ENST00000565038 SMIM11AP58511 58 aa0.98□□□□□ -2.25
PALB2-203ENST00000565038 RUNX1Q01196 453 aa0.98□□□□□ -2.25
PALB2-203ENST00000565038 DEFA5Q01523 94 aa0.98□□□□□ -2.25
PALB2-203ENST00000565038 EDDM3AQ14507 147 aa0.98□□□□□ -2.25
PALB2-203ENST00000565038 INSL4Q14641 139 aa0.98□□□□□ -2.25
PALB2-203ENST00000565038 CDK5R1Q15078 307 aa0.98□□□□□ -2.25
PALB2-203ENST00000565038 ELOBQ15370 118 aa0.98□□□□□ -2.25
PALB2-203ENST00000565038 DEFB136Q30KP8 78 aa0.98□□□□□ -2.25
PALB2-203ENST00000565038 KHDC3LQ587J8 217 aa0.98□□□□□ -2.25
PALB2-203ENST00000565038 IBA57Q5T440 356 aaKnown RBP0.98□□□□□ -2.25
PALB2-203ENST00000565038 C12orf73Q69YU5 71 aa0.98□□□□□ -2.25
PALB2-203ENST00000565038 XAF1Q6GPH4 301 aa0.98□□□□□ -2.25
PALB2-203ENST00000565038 SLC25A26Q70HW3 274 aa0.98□□□□□ -2.25
PALB2-203ENST00000565038 DHFR2Q86XF0 187 aa0.98□□□□□ -2.25
PALB2-203ENST00000565038 OR11H6Q8NGC7 330 aa0.98□□□□□ -2.25
PALB2-203ENST00000565038 OR51A2Q8NGJ7 313 aa0.98□□□□□ -2.25
PALB2-203ENST00000565038 OTOSQ8NHW6 89 aa0.98□□□□□ -2.25
PALB2-203ENST00000565038 RASSF5Q8WWW0 418 aa0.98□□□□□ -2.25
PALB2-203ENST00000565038 TMEM106AQ96A25 262 aa0.98□□□□□ -2.25
PALB2-203ENST00000565038 MALSU1Q96EH3 234 aa0.98□□□□□ -2.25
PALB2-203ENST00000565038 SCGB3A1Q96QR1 104 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms