RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 SPATA12Q7Z6I5 190 aa9.3□□□□□ -0.92
VPS9D1-204ENST00000565023 SYT8Q8NBV8 401 aa9.3□□□□□ -0.92
VPS9D1-204ENST00000565023 DAZAP1Q96EP5 407 aaKnown RBP9.3□□□□□ -0.92
VPS9D1-204ENST00000565023 SSBP4Q9BWG4 385 aaPredicted RBP9.3□□□□□ -0.92
VPS9D1-204ENST00000565023 PHLDA3Q9Y5J5 127 aa9.3□□□□□ -0.92
VPS9D1-204ENST00000565023 LY96Q9Y6Y9 160 aa9.3□□□□□ -0.92
VPS9D1-204ENST00000565023 K7EN84 100 aa9.29□□□□□ -0.92
VPS9D1-204ENST00000565023 SNAI2O43623 268 aa9.29□□□□□ -0.92
VPS9D1-204ENST00000565023 OR5AL1P0C617 328 aa9.29□□□□□ -0.92
VPS9D1-204ENST00000565023 CEBPGP53567 150 aa9.29□□□□□ -0.92
VPS9D1-204ENST00000565023 SLC25A29Q8N8R3 303 aa9.29□□□□□ -0.92
VPS9D1-204ENST00000565023 PRADC1Q9BSG0 188 aa9.29□□□□□ -0.92
VPS9D1-204ENST00000565023 SMDT1Q9H4I9 107 aa9.29□□□□□ -0.92
VPS9D1-204ENST00000565023 JPT2Q9H910 190 aa9.29□□□□□ -0.92
VPS9D1-204ENST00000565023 C9JQL5 133 aa9.28□□□□□ -0.92
VPS9D1-204ENST00000565023 P01737 135 aa9.28□□□□□ -0.92
VPS9D1-204ENST00000565023 RPS20P60866 119 aaKnown RBP9.28□□□□□ -0.92
VPS9D1-204ENST00000565023 RHOHQ15669 191 aa9.28□□□□□ -0.92
VPS9D1-204ENST00000565023 ZFP2Q6ZN57 461 aa9.28□□□□□ -0.92
VPS9D1-204ENST00000565023 ZFP82Q8N141 532 aa9.28□□□□□ -0.92
VPS9D1-204ENST00000565023 OR2D3Q8NGH3 330 aa9.28□□□□□ -0.92
VPS9D1-204ENST00000565023 SMIM7Q9BQ49 75 aa9.28□□□□□ -0.92
VPS9D1-204ENST00000565023 M0R381 172 aa9.27□□□□□ -0.93
VPS9D1-204ENST00000565023 IGLC6P0CF74 106 aa9.27□□□□□ -0.93
VPS9D1-204ENST00000565023 SRSF3P84103 164 aaKnown RBP9.27□□□□□ -0.93
VPS9D1-204ENST00000565023 PEA15Q15121 130 aa9.27□□□□□ -0.93
VPS9D1-204ENST00000565023 UFSP1Q6NVU6 142 aa9.27□□□□□ -0.93
VPS9D1-204ENST00000565023 NUDT10Q8NFP7 164 aa9.27□□□□□ -0.93
VPS9D1-204ENST00000565023 OR10AG1Q8NH19 301 aa9.27□□□□□ -0.93
VPS9D1-204ENST00000565023 NUDT11Q96G61 164 aa9.27□□□□□ -0.93
VPS9D1-204ENST00000565023 SFRP2Q96HF1 295 aa9.27□□□□□ -0.93
VPS9D1-204ENST00000565023 TRAV9-2A0A087WT02 112 aa9.26□□□□□ -0.93
VPS9D1-204ENST00000565023 TRBV6-4A0A1B0GX49 114 aa9.26□□□□□ -0.93
VPS9D1-204ENST00000565023 XKRY2A2RUG3 117 aa9.26□□□□□ -0.93
VPS9D1-204ENST00000565023 GAGE12JA6NER3 117 aa9.26□□□□□ -0.93
VPS9D1-204ENST00000565023 ZNF727A8MUV8 499 aa9.26□□□□□ -0.93
VPS9D1-204ENST00000565023 GZMBP10144 247 aa9.26□□□□□ -0.93
VPS9D1-204ENST00000565023 EVI2AP22794 236 aa9.26□□□□□ -0.93
VPS9D1-204ENST00000565023 FUSP35637 526 aaKnown RBP eCLIP9.26□□□□□ -0.93
VPS9D1-204ENST00000565023 RAB14P61106 215 aa9.26□□□□□ -0.93
VPS9D1-204ENST00000565023 IFITM2Q01629 132 aa9.26□□□□□ -0.93
VPS9D1-204ENST00000565023 GAGE1Q13065 139 aa9.26□□□□□ -0.93
VPS9D1-204ENST00000565023 GAGE4Q13068 117 aa9.26□□□□□ -0.93
VPS9D1-204ENST00000565023 GAGE5Q13069 117 aa9.26□□□□□ -0.93
VPS9D1-204ENST00000565023 GAGE13Q4V321 117 aa9.26□□□□□ -0.93
VPS9D1-204ENST00000565023 OR10J3Q5JRS4 329 aa9.26□□□□□ -0.93
VPS9D1-204ENST00000565023 Q6ZSN1 163 aa9.26□□□□□ -0.93
VPS9D1-204ENST00000565023 SAMD10Q9BYL1 202 aa9.26□□□□□ -0.93
VPS9D1-204ENST00000565023 RNASE7Q9H1E1 156 aaKnown RBP9.26□□□□□ -0.93
VPS9D1-204ENST00000565023 RHODO00212 210 aa9.25□□□□□ -0.93
VPS9D1-204ENST00000565023 KRTAP10-2P60368 255 aa9.25□□□□□ -0.93
VPS9D1-204ENST00000565023 FAM74A3Q4VXF1 159 aa9.25□□□□□ -0.93
VPS9D1-204ENST00000565023 FAM74A4Q5TZK3 123 aa9.25□□□□□ -0.93
VPS9D1-204ENST00000565023 Q6ZRN7 208 aaPredicted RBP9.25□□□□□ -0.93
VPS9D1-204ENST00000565023 FAM231DQ6ZW35 169 aa9.25□□□□□ -0.93
VPS9D1-204ENST00000565023 SH2D6Q7Z4S9 175 aa9.25□□□□□ -0.93
VPS9D1-204ENST00000565023 LINC01551Q86U37 167 aa9.25□□□□□ -0.93
VPS9D1-204ENST00000565023 FER1L6-AS1Q8NA97 138 aa9.25□□□□□ -0.93
VPS9D1-204ENST00000565023 RPP21Q9H633 154 aaKnown RBP9.25□□□□□ -0.93
VPS9D1-204ENST00000565023 CRYGDP07320 174 aa9.24□□□□□ -0.93
VPS9D1-204ENST00000565023 CLLU1Q5K131 121 aa9.24□□□□□ -0.93
VPS9D1-204ENST00000565023 ATP6V0E2Q8NHE4 81 aa9.24□□□□□ -0.93
VPS9D1-204ENST00000565023 KRTAP4-5Q9BYR2 181 aa9.24□□□□□ -0.93
VPS9D1-204ENST00000565023 MSRB1Q9NZV6 116 aa9.24□□□□□ -0.93
VPS9D1-204ENST00000565023 A0A087WWL8 130 aa9.23□□□□□ -0.93
VPS9D1-204ENST00000565023 TRAV8-6A0A0B4J262 113 aa9.23□□□□□ -0.93
VPS9D1-204ENST00000565023 MUC21A0A0G2JKD1 596 aa9.23□□□□□ -0.93
VPS9D1-204ENST00000565023 MUC21A0A140T8X8 626 aa9.23□□□□□ -0.93
VPS9D1-204ENST00000565023 F2Z2F3 143 aa9.23□□□□□ -0.93
VPS9D1-204ENST00000565023 IGHV3-30P01768 117 aa9.23□□□□□ -0.93
VPS9D1-204ENST00000565023 IGHV3-33P01772 117 aa9.23□□□□□ -0.93
VPS9D1-204ENST00000565023 DNAH10OSP0CZ25 163 aa9.23□□□□□ -0.93
VPS9D1-204ENST00000565023 IGHV3-30-3P0DP02 117 aa9.23□□□□□ -0.93
VPS9D1-204ENST00000565023 IGHV3-30-5P0DP03 117 aa9.23□□□□□ -0.93
VPS9D1-204ENST00000565023 BTF3P20290 206 aaKnown RBP9.23□□□□□ -0.93
VPS9D1-204ENST00000565023 ERVFC1-1P60608 527 aa9.23□□□□□ -0.93
VPS9D1-204ENST00000565023 SPANXN1Q5VSR9 72 aa9.23□□□□□ -0.93
VPS9D1-204ENST00000565023 C14orf178Q8N769 122 aaPredicted RBP9.23□□□□□ -0.93
VPS9D1-204ENST00000565023 IGHV3-38A0A0C4DH36 116 aa9.22□□□□□ -0.93
VPS9D1-204ENST00000565023 EREGO14944 169 aa9.22□□□□□ -0.93
VPS9D1-204ENST00000565023 CTRLP40313 264 aa9.22□□□□□ -0.93
VPS9D1-204ENST00000565023 SSTP61278 116 aa9.22□□□□□ -0.93
VPS9D1-204ENST00000565023 TMEM241Q24JQ0 296 aa9.22□□□□□ -0.93
VPS9D1-204ENST00000565023 NFE4Q86UQ8 179 aa9.22□□□□□ -0.93
VPS9D1-204ENST00000565023 Q9HAA7 133 aa9.22□□□□□ -0.93
VPS9D1-204ENST00000565023 Q9UF83 564 aa9.22□□□□□ -0.93
VPS9D1-204ENST00000565023 GATCO43716 136 aaKnown RBP9.21□□□□□ -0.94
VPS9D1-204ENST00000565023 RPL23P62829 140 aaKnown RBP9.21□□□□□ -0.94
VPS9D1-204ENST00000565023 CACNG7P62955 275 aa9.21□□□□□ -0.94
VPS9D1-204ENST00000565023 CT83Q5H943 113 aa9.21□□□□□ -0.94
VPS9D1-204ENST00000565023 LELP1Q5T871 98 aa9.21□□□□□ -0.94
VPS9D1-204ENST00000565023 WDR73Q6P4I2 378 aa9.21□□□□□ -0.94
VPS9D1-204ENST00000565023 LYZL1Q6UWQ5 148 aa9.21□□□□□ -0.94
VPS9D1-204ENST00000565023 GTSF1Q8WW33 167 aa9.21□□□□□ -0.94
VPS9D1-204ENST00000565023 TPPP3Q9BW30 176 aa9.21□□□□□ -0.94
VPS9D1-204ENST00000565023 CNFNQ9BYD5 112 aa9.21□□□□□ -0.94
VPS9D1-204ENST00000565023 GTSF1LQ9H1H1 148 aa9.21□□□□□ -0.94
VPS9D1-204ENST00000565023 OSTCQ9NRP0 149 aa9.21□□□□□ -0.94
VPS9D1-204ENST00000565023 NAT8Q9UHE5 227 aa9.21□□□□□ -0.94
VPS9D1-204ENST00000565023 A8MWL6 223 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms