RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 C16orf74Q96GX8 76 aa8.11□□□□□ -1.11
SNX29-204ENST00000564791 PRELID3AQ96N28 172 aa8.11□□□□□ -1.11
SNX29-204ENST00000564791 MRPL16Q9NX20 251 aaKnown RBP8.11□□□□□ -1.11
SNX29-204ENST00000564791 TRAV26-2A0A0B4J265 109 aa8.11□□□□□ -1.11
SNX29-204ENST00000564791 PLAC8L1A1L4L8 177 aa8.11□□□□□ -1.11
SNX29-204ENST00000564791 GATA1P15976 413 aaPredicted RBP8.11□□□□□ -1.11
SNX29-204ENST00000564791 RIPPLY3P57055 190 aa8.11□□□□□ -1.11
SNX29-204ENST00000564791 LINC00310P59036 64 aa8.11□□□□□ -1.11
SNX29-204ENST00000564791 LINC00315P59091 139 aa8.11□□□□□ -1.11
SNX29-204ENST00000564791 ANKRD39Q53RE8 183 aa8.11□□□□□ -1.11
SNX29-204ENST00000564791 BAGE3Q86Y29 109 aa8.11□□□□□ -1.11
SNX29-204ENST00000564791 PTH2Q96A98 100 aa8.11□□□□□ -1.11
SNX29-204ENST00000564791 SAMD10Q9BYL1 202 aa8.11□□□□□ -1.11
SNX29-204ENST00000564791 UBE2CO00762 179 aa8.1□□□□□ -1.11
SNX29-204ENST00000564791 SMIM17P0DL12 118 aa8.1□□□□□ -1.11
SNX29-204ENST00000564791 HOXA5P20719 270 aa8.1□□□□□ -1.11
SNX29-204ENST00000564791 PDZD11Q5EBL8 140 aa8.1□□□□□ -1.11
SNX29-204ENST00000564791 X6R8D5 127 aa8.1□□□□□ -1.11
SNX29-204ENST00000564791 NBEAL1Q6ZS30 2694 aa8.09□□□□□ -1.11
SNX29-204ENST00000564791 MGAM2Q2M2H8 2515 aa8.09□□□□□ -1.11
SNX29-204ENST00000564791 PRSS47A8MTI9 375 aa8.09□□□□□ -1.11
SNX29-204ENST00000564791 A8MZ25 164 aa8.09□□□□□ -1.11
SNX29-204ENST00000564791 NUPR1O60356 82 aa8.09□□□□□ -1.11
SNX29-204ENST00000564791 SERF1AO75920 110 aa8.09□□□□□ -1.11
SNX29-204ENST00000564791 NPYP01303 97 aa8.09□□□□□ -1.11
SNX29-204ENST00000564791 PPBPP02775 128 aa8.09□□□□□ -1.11
SNX29-204ENST00000564791 CRYGDP07320 174 aa8.09□□□□□ -1.11
SNX29-204ENST00000564791 PIK3CD-AS1Q5SR53 167 aa8.09□□□□□ -1.11
SNX29-204ENST00000564791 FAM74A4Q5TZK3 123 aa8.09□□□□□ -1.11
SNX29-204ENST00000564791 HIST3H2BBQ8N257 126 aa8.09□□□□□ -1.11
SNX29-204ENST00000564791 POM121L12Q8N7R1 296 aa8.09□□□□□ -1.11
SNX29-204ENST00000564791 MRAP2Q96G30 205 aa8.09□□□□□ -1.11
SNX29-204ENST00000564791 NBEAL2Q6ZNJ1 2754 aa8.08□□□□□ -1.12
SNX29-204ENST00000564791 TRGV1A0A0A0MS02 117 aa8.08□□□□□ -1.12
SNX29-204ENST00000564791 DAZ2Q13117 558 aaKnown RBP8.08□□□□□ -1.12
SNX29-204ENST00000564791 RASL10AQ92737 203 aa8.08□□□□□ -1.12
SNX29-204ENST00000564791 NOP10Q9NPE3 64 aaKnown RBP8.08□□□□□ -1.12
SNX29-204ENST00000564791 IFITM10A6NMD0 228 aa8.07□□□□□ -1.12
SNX29-204ENST00000564791 A8MWV9 139 aa8.07□□□□□ -1.12
SNX29-204ENST00000564791 PRB2P02812 416 aaPredicted RBP8.07□□□□□ -1.12
SNX29-204ENST00000564791 ZNF56Q15929 161 aa8.07□□□□□ -1.12
SNX29-204ENST00000564791 SUMO4Q6EEV6 95 aa8.07□□□□□ -1.12
SNX29-204ENST00000564791 Q6ZTI0 123 aa8.07□□□□□ -1.12
SNX29-204ENST00000564791 NRACQ8N912 160 aa8.07□□□□□ -1.12
SNX29-204ENST00000564791 URB1-AS1Q96HZ7 61 aa8.07□□□□□ -1.12
SNX29-204ENST00000564791 SMIM9A6NGZ8 99 aa8.07□□□□□ -1.12
SNX29-204ENST00000564791 F5H697 171 aa8.07□□□□□ -1.12
SNX29-204ENST00000564791 RS1O15537 224 aa8.07□□□□□ -1.12
SNX29-204ENST00000564791 TNFRSF6BO95407 300 aa8.07□□□□□ -1.12
SNX29-204ENST00000564791 KPRPQ5T749 579 aaPredicted RBP8.07□□□□□ -1.12
SNX29-204ENST00000564791 CFAP126Q5VTH2 177 aa8.07□□□□□ -1.12
SNX29-204ENST00000564791 UFSP1Q6NVU6 142 aa8.07□□□□□ -1.12
SNX29-204ENST00000564791 RNASEKQ6P5S7 137 aaKnown RBP8.07□□□□□ -1.12
SNX29-204ENST00000564791 OR11H2Q8NH07 326 aa8.07□□□□□ -1.12
SNX29-204ENST00000564791 RNF183Q96D59 192 aa8.07□□□□□ -1.12
SNX29-204ENST00000564791 NDUFAF3Q9BU61 184 aa8.07□□□□□ -1.12
SNX29-204ENST00000564791 LAMTOR2Q9Y2Q5 125 aa8.07□□□□□ -1.12
SNX29-204ENST00000564791 DNHD1Q96M86 4753 aa8.06□□□□□ -1.12
SNX29-204ENST00000564791 IGHV3-73A0A0B4J1V6 119 aa8.06□□□□□ -1.12
SNX29-204ENST00000564791 LOC389332A0A1B0GUA5 103 aa8.06□□□□□ -1.12
SNX29-204ENST00000564791 ESDP10768 282 aa8.06□□□□□ -1.12
SNX29-204ENST00000564791 EMP1P54849 157 aa8.06□□□□□ -1.12
SNX29-204ENST00000564791 LGALS9BQ3B8N2 356 aa8.06□□□□□ -1.12
SNX29-204ENST00000564791 Q6ZWC4 215 aa8.06□□□□□ -1.12
SNX29-204ENST00000564791 NIT1Q86X76 327 aa8.06□□□□□ -1.12
SNX29-204ENST00000564791 RPL39LQ96EH5 51 aaKnown RBP8.06□□□□□ -1.12
SNX29-204ENST00000564791 OVOL2Q9BRP0 275 aa8.06□□□□□ -1.12
SNX29-204ENST00000564791 S100A2P29034 98 aa8.05□□□□□ -1.12
SNX29-204ENST00000564791 MAP1LC3AQ9H492 121 aa8.05□□□□□ -1.12
SNX29-204ENST00000564791 IGHV4-28A0A0C4DH34 117 aa8.04□□□□□ -1.12
SNX29-204ENST00000564791 GAGE12BA1L429 117 aa8.04□□□□□ -1.12
SNX29-204ENST00000564791 RHODO00212 210 aa8.04□□□□□ -1.12
SNX29-204ENST00000564791 GAGE7O76087 117 aa8.04□□□□□ -1.12
SNX29-204ENST00000564791 GAGE12FP0CL80 117 aa8.04□□□□□ -1.12
SNX29-204ENST00000564791 GAGE12GP0CL81 117 aa8.04□□□□□ -1.12
SNX29-204ENST00000564791 GAGE12IP0CL82 117 aa8.04□□□□□ -1.12
SNX29-204ENST00000564791 IFI27P40305 119 aaPredicted RBP8.04□□□□□ -1.12
SNX29-204ENST00000564791 PRSS3P2Q8NHM4 247 aa8.04□□□□□ -1.12
SNX29-204ENST00000564791 HIST1H2BLQ99880 126 aa8.04□□□□□ -1.12
SNX29-204ENST00000564791 K7EIL1 84 aa8.03□□□□□ -1.12
SNX29-204ENST00000564791 FABP4P15090 132 aa8.03□□□□□ -1.12
SNX29-204ENST00000564791 PMCHP20382 165 aa8.03□□□□□ -1.12
SNX29-204ENST00000564791 FA2HQ7L5A8 372 aa8.03□□□□□ -1.12
SNX29-204ENST00000564791 Q8NAQ8 132 aa8.03□□□□□ -1.12
SNX29-204ENST00000564791 OR4C5Q8NGB2 326 aa8.03□□□□□ -1.12
SNX29-204ENST00000564791 CHCHD1Q96BP2 118 aaKnown RBP8.03□□□□□ -1.12
SNX29-204ENST00000564791 RETNQ9HD89 108 aa8.03□□□□□ -1.12
SNX29-204ENST00000564791 TRAV4A0A0B4J268 109 aa8.03□□□□□ -1.12
SNX29-204ENST00000564791 M0QY20 66 aa8.03□□□□□ -1.12
SNX29-204ENST00000564791 DEFB4AO15263 64 aa8.03□□□□□ -1.12
SNX29-204ENST00000564791 IGHV3-53P01767 116 aa8.03□□□□□ -1.12
SNX29-204ENST00000564791 LINC00614P0C842 121 aa8.03□□□□□ -1.12
SNX29-204ENST00000564791 MIFP14174 115 aa8.03□□□□□ -1.12
SNX29-204ENST00000564791 Q6ZSN1 163 aa8.03□□□□□ -1.12
SNX29-204ENST00000564791 ZNF479Q96JC4 524 aa8.03□□□□□ -1.12
SNX29-204ENST00000564791 TRGV2A0A075B6R0 118 aa8.02□□□□□ -1.13
SNX29-204ENST00000564791 HSBP1O75506 76 aa8.02□□□□□ -1.13
SNX29-204ENST00000564791 PPP1R17O96001 155 aa8.02□□□□□ -1.13
SNX29-204ENST00000564791 AKR1D1P51857 326 aa8.02□□□□□ -1.13
SNX29-204ENST00000564791 SUMO2P61956 95 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms