RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 Q6ZQT7 251 aa5.42□□□□□ -1.54
HERPUD1-209ENST00000564678 OR9G4Q8NGQ1 327 aa5.42□□□□□ -1.54
HERPUD1-209ENST00000564678 DPH3P1Q9H4G8 78 aa5.42□□□□□ -1.54
HERPUD1-209ENST00000564678 IGHV4OR15-8A0A075B7B6 117 aa5.41□□□□□ -1.54
HERPUD1-209ENST00000564678 A0A087WW49 117 aa5.41□□□□□ -1.54
HERPUD1-209ENST00000564678 DUSP14O95147 198 aaKnown RBP5.41□□□□□ -1.54
HERPUD1-209ENST00000564678 HOXD3P31249 432 aaPredicted RBP5.41□□□□□ -1.54
HERPUD1-209ENST00000564678 SYNJ2BPP57105 145 aa5.41□□□□□ -1.54
HERPUD1-209ENST00000564678 COL5A1-AS1Q5SY13 56 aa5.41□□□□□ -1.54
HERPUD1-209ENST00000564678 SLC25A34Q6PIV7 304 aa5.41□□□□□ -1.54
HERPUD1-209ENST00000564678 NRACQ8N912 160 aa5.41□□□□□ -1.54
HERPUD1-209ENST00000564678 OR1N2Q8NGR9 330 aa5.41□□□□□ -1.54
HERPUD1-209ENST00000564678 PMCHL2Q9BQD1 86 aa5.41□□□□□ -1.54
HERPUD1-209ENST00000564678 C20orf78Q9BR46 151 aa5.41□□□□□ -1.54
HERPUD1-209ENST00000564678 KRTAP9-2Q9BYQ4 174 aa5.41□□□□□ -1.54
HERPUD1-209ENST00000564678 TIMM8BQ9Y5J9 83 aaPredicted RBP5.41□□□□□ -1.54
HERPUD1-209ENST00000564678 TRAV2A0A0B4J234 112 aa5.4□□□□□ -1.54
HERPUD1-209ENST00000564678 A0A0J9YX75 114 aa5.4□□□□□ -1.54
HERPUD1-209ENST00000564678 KRTAP9-6A0A140TA67 174 aa5.4□□□□□ -1.54
HERPUD1-209ENST00000564678 M0R381 172 aa5.4□□□□□ -1.54
HERPUD1-209ENST00000564678 NXPH4O95158 308 aa5.4□□□□□ -1.54
HERPUD1-209ENST00000564678 RNASE3P12724 160 aaKnown RBP5.4□□□□□ -1.54
HERPUD1-209ENST00000564678 POM121L12Q8N7R1 296 aa5.4□□□□□ -1.54
HERPUD1-209ENST00000564678 GOLT1BQ9Y3E0 138 aa5.4□□□□□ -1.54
HERPUD1-209ENST00000564678 DOPEY2Q9Y3R5 2298 aa5.4□□□□□ -1.54
HERPUD1-209ENST00000564678 NAV2Q8IVL1 2488 aa5.4□□□□□ -1.55
HERPUD1-209ENST00000564678 hDV102S1A0JD36 115 aa5.4□□□□□ -1.55
HERPUD1-209ENST00000564678 ATP5LO75964 103 aa5.4□□□□□ -1.55
HERPUD1-209ENST00000564678 GAS8-AS1O95177 125 aa5.4□□□□□ -1.55
HERPUD1-209ENST00000564678 DEFB1P60022 68 aa5.4□□□□□ -1.55
HERPUD1-209ENST00000564678 LAGE3Q14657 143 aa5.4□□□□□ -1.55
HERPUD1-209ENST00000564678 AP1S3Q96PC3 154 aa5.4□□□□□ -1.55
HERPUD1-209ENST00000564678 MAP1AP78559 2803 aaPredicted RBP5.4□□□□□ -1.55
HERPUD1-209ENST00000564678 C7orf71A4D174 169 aa5.39□□□□□ -1.55
HERPUD1-209ENST00000564678 LINC01619G3V211 115 aa5.39□□□□□ -1.55
HERPUD1-209ENST00000564678 GNRH2O43555 120 aa5.39□□□□□ -1.55
HERPUD1-209ENST00000564678 ZNF688P0C7X2 276 aa5.39□□□□□ -1.55
HERPUD1-209ENST00000564678 GATA1P15976 413 aaPredicted RBP5.39□□□□□ -1.55
HERPUD1-209ENST00000564678 FOXI2Q6ZQN5 318 aa5.39□□□□□ -1.55
HERPUD1-209ENST00000564678 C4orf3Q8WVX3 66 aa5.39□□□□□ -1.55
HERPUD1-209ENST00000564678 CREBBPQ92793 2442 aa5.39□□□□□ -1.55
HERPUD1-209ENST00000564678 TCAPO15273 167 aa5.39□□□□□ -1.55
HERPUD1-209ENST00000564678 COX8AP10176 69 aa5.39□□□□□ -1.55
HERPUD1-209ENST00000564678 TCTEX1D4Q5JR98 221 aa5.39□□□□□ -1.55
HERPUD1-209ENST00000564678 LINC01549A6NIU2 74 aa5.38□□□□□ -1.55
HERPUD1-209ENST00000564678 CD5LO43866 347 aa5.38□□□□□ -1.55
HERPUD1-209ENST00000564678 POLQO75417 2590 aa5.38□□□□□ -1.55
HERPUD1-209ENST00000564678 SMIM17P0DL12 118 aa5.38□□□□□ -1.55
HERPUD1-209ENST00000564678 G0S2P27469 103 aa5.38□□□□□ -1.55
HERPUD1-209ENST00000564678 TFPI2P48307 235 aa5.38□□□□□ -1.55
HERPUD1-209ENST00000564678 RPL32P62910 135 aaKnown RBP5.38□□□□□ -1.55
HERPUD1-209ENST00000564678 ORMDL2Q53FV1 153 aa5.38□□□□□ -1.55
HERPUD1-209ENST00000564678 TMEM158Q8WZ71 300 aa5.38□□□□□ -1.55
HERPUD1-209ENST00000564678 SMIM2Q9BVW6 85 aa5.38□□□□□ -1.55
HERPUD1-209ENST00000564678 J3QKU1 62 aa5.38□□□□□ -1.55
HERPUD1-209ENST00000564678 PRSS1P07477 247 aa5.38□□□□□ -1.55
HERPUD1-209ENST00000564678 FXYD7P58549 80 aa5.38□□□□□ -1.55
HERPUD1-209ENST00000564678 BATFQ16520 125 aa5.38□□□□□ -1.55
HERPUD1-209ENST00000564678 C12orf54Q6X4T0 127 aa5.38□□□□□ -1.55
HERPUD1-209ENST00000564678 C14orf178Q8N769 122 aaPredicted RBP5.38□□□□□ -1.55
HERPUD1-209ENST00000564678 WFDC11Q8NEX6 87 aa5.38□□□□□ -1.55
HERPUD1-209ENST00000564678 OR11H1Q8NG94 326 aa5.38□□□□□ -1.55
HERPUD1-209ENST00000564678 RASL10AQ92737 203 aa5.38□□□□□ -1.55
HERPUD1-209ENST00000564678 TNFRSF18Q9Y5U5 241 aa5.38□□□□□ -1.55
HERPUD1-209ENST00000564678 KIF25-AS1Q9Y6Z4 181 aa5.38□□□□□ -1.55
HERPUD1-209ENST00000564678 TRAV26-2A0A0B4J265 109 aa5.37□□□□□ -1.55
HERPUD1-209ENST00000564678 TRAV12-3A0A0B4J271 114 aa5.37□□□□□ -1.55
HERPUD1-209ENST00000564678 A8MTW9 85 aa5.37□□□□□ -1.55
HERPUD1-209ENST00000564678 DLEU1O43261 78 aa5.37□□□□□ -1.55
HERPUD1-209ENST00000564678 CD7P09564 240 aa5.37□□□□□ -1.55
HERPUD1-209ENST00000564678 ADAMTSL5Q6ZMM2 481 aa5.37□□□□□ -1.55
HERPUD1-209ENST00000564678 C9orf85Q96MD7 179 aa5.37□□□□□ -1.55
HERPUD1-209ENST00000564678 MUC4Q99102 2169 aa5.36□□□□□ -1.55
HERPUD1-209ENST00000564678 IGHV1OR15-1A0A075B7D0 117 aa5.36□□□□□ -1.55
HERPUD1-209ENST00000564678 IGHV3-16A0A0C4DH30 117 aa5.36□□□□□ -1.55
HERPUD1-209ENST00000564678 LINC00315P59091 139 aa5.36□□□□□ -1.55
HERPUD1-209ENST00000564678 GAGE1Q13065 139 aa5.36□□□□□ -1.55
HERPUD1-209ENST00000564678 Q6ZSV7 163 aa5.36□□□□□ -1.55
HERPUD1-209ENST00000564678 STPG4Q8N801 248 aa5.36□□□□□ -1.55
HERPUD1-209ENST00000564678 SYT8Q8NBV8 401 aa5.36□□□□□ -1.55
HERPUD1-209ENST00000564678 SELENOKQ9Y6D0 94 aa5.36□□□□□ -1.55
HERPUD1-209ENST00000564678 ZANQ9Y493 2812 aa5.36□□□□□ -1.55
HERPUD1-209ENST00000564678 TENM4Q6N022 2769 aa5.36□□□□□ -1.55
HERPUD1-209ENST00000564678 HINT1P49773 126 aaPredicted RBP5.36□□□□□ -1.55
HERPUD1-209ENST00000564678 SLURP1P55000 103 aa5.36□□□□□ -1.55
HERPUD1-209ENST00000564678 AMTNQ6UX39 209 aa5.36□□□□□ -1.55
HERPUD1-209ENST00000564678 TOMM6Q96B49 74 aa5.36□□□□□ -1.55
HERPUD1-209ENST00000564678 C18orf15Q96N68 181 aa5.36□□□□□ -1.55
HERPUD1-209ENST00000564678 FOXC2Q99958 501 aa5.36□□□□□ -1.55
HERPUD1-209ENST00000564678 KRTAP4-7Q9BYR0 210 aa5.36□□□□□ -1.55
HERPUD1-209ENST00000564678 DKK2Q9UBU2 259 aa5.36□□□□□ -1.55
HERPUD1-209ENST00000564678 TEX15Q9BXT5 2789 aa5.35□□□□□ -1.55
HERPUD1-209ENST00000564678 GCN1Q92616 2671 aaKnown RBP5.35□□□□□ -1.55
HERPUD1-209ENST00000564678 TRAV12-1A0A0B4J245 112 aa5.35□□□□□ -1.55
HERPUD1-209ENST00000564678 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.35□□□□□ -1.55
HERPUD1-209ENST00000564678 NUDT3O95989 172 aa5.35□□□□□ -1.55
HERPUD1-209ENST00000564678 IGKCP01834 107 aa5.35□□□□□ -1.55
HERPUD1-209ENST00000564678 HLA-DRB4P13762 266 aa5.35□□□□□ -1.55
HERPUD1-209ENST00000564678 PLA2G2AP14555 144 aa5.35□□□□□ -1.55
HERPUD1-209ENST00000564678 ZNF25P17030 456 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms