RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 SMIM12Q96EX1 92 aa6.83□□□□□ -1.32
CDH1-206ENST00000564676 KRTAP9-2Q9BYQ4 174 aa6.83□□□□□ -1.32
CDH1-206ENST00000564676 A0A087WWL8 130 aa6.82□□□□□ -1.32
CDH1-206ENST00000564676 P01737 135 aa6.82□□□□□ -1.32
CDH1-206ENST00000564676 RPS20P60866 119 aaKnown RBP6.82□□□□□ -1.32
CDH1-206ENST00000564676 SSTP61278 116 aa6.82□□□□□ -1.32
CDH1-206ENST00000564676 TOR2AQ5JU69 321 aa6.82□□□□□ -1.32
CDH1-206ENST00000564676 SPANXN1Q5VSR9 72 aa6.82□□□□□ -1.32
CDH1-206ENST00000564676 Q6ZSN1 163 aa6.82□□□□□ -1.32
CDH1-206ENST00000564676 C6orf223Q8N319 242 aa6.82□□□□□ -1.32
CDH1-206ENST00000564676 OR2D3Q8NGH3 330 aa6.82□□□□□ -1.32
CDH1-206ENST00000564676 SFRP2Q96HF1 295 aa6.82□□□□□ -1.32
CDH1-206ENST00000564676 EIF5A2Q9GZV4 153 aaKnown RBP6.82□□□□□ -1.32
CDH1-206ENST00000564676 FRAS1Q86XX4 4008 aa6.81□□□□□ -1.32
CDH1-206ENST00000564676 TRBV20OR9-2A0A075B6H5 130 aa6.81□□□□□ -1.32
CDH1-206ENST00000564676 MUC21A0A0G2JKD1 596 aa6.81□□□□□ -1.32
CDH1-206ENST00000564676 MUC21A0A140T8X8 626 aa6.81□□□□□ -1.32
CDH1-206ENST00000564676 A0A1W2PPQ1 181 aa6.81□□□□□ -1.32
CDH1-206ENST00000564676 XKRY2A2RUG3 117 aa6.81□□□□□ -1.32
CDH1-206ENST00000564676 C19orf71A6NCJ1 209 aa6.81□□□□□ -1.32
CDH1-206ENST00000564676 GAGE12JA6NER3 117 aa6.81□□□□□ -1.32
CDH1-206ENST00000564676 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.81□□□□□ -1.32
CDH1-206ENST00000564676 TMEM250H0YL14 139 aa6.81□□□□□ -1.32
CDH1-206ENST00000564676 SNAI2O43623 268 aa6.81□□□□□ -1.32
CDH1-206ENST00000564676 OR5AL1P0C617 328 aa6.81□□□□□ -1.32
CDH1-206ENST00000564676 CEBPGP53567 150 aa6.81□□□□□ -1.32
CDH1-206ENST00000564676 GAGE1Q13065 139 aa6.81□□□□□ -1.32
CDH1-206ENST00000564676 GAGE4Q13068 117 aa6.81□□□□□ -1.32
CDH1-206ENST00000564676 GAGE5Q13069 117 aa6.81□□□□□ -1.32
CDH1-206ENST00000564676 GAGE13Q4V321 117 aa6.81□□□□□ -1.32
CDH1-206ENST00000564676 UFSP1Q6NVU6 142 aa6.81□□□□□ -1.32
CDH1-206ENST00000564676 OR10AG1Q8NH19 301 aa6.81□□□□□ -1.32
CDH1-206ENST00000564676 TPPP3Q9BW30 176 aa6.81□□□□□ -1.32
CDH1-206ENST00000564676 CRYGDP07320 174 aa6.8□□□□□ -1.32
CDH1-206ENST00000564676 GZMBP10144 247 aa6.8□□□□□ -1.32
CDH1-206ENST00000564676 TIRAPP58753 221 aa6.8□□□□□ -1.32
CDH1-206ENST00000564676 C14orf178Q8N769 122 aaPredicted RBP6.8□□□□□ -1.32
CDH1-206ENST00000564676 FER1L6-AS1Q8NA97 138 aa6.8□□□□□ -1.32
CDH1-206ENST00000564676 ATP6V0E2Q8NHE4 81 aa6.8□□□□□ -1.32
CDH1-206ENST00000564676 OCC1Q8TAD7 63 aa6.8□□□□□ -1.32
CDH1-206ENST00000564676 SSBP4Q9BWG4 385 aaPredicted RBP6.8□□□□□ -1.32
CDH1-206ENST00000564676 KRTAP1-5Q9BYS1 174 aa6.8□□□□□ -1.32
CDH1-206ENST00000564676 TRAV9-2A0A087WT02 112 aa6.79□□□□□ -1.32
CDH1-206ENST00000564676 TRAV8-6A0A0B4J262 113 aa6.79□□□□□ -1.32
CDH1-206ENST00000564676 OR10J3Q5JRS4 329 aa6.79□□□□□ -1.32
CDH1-206ENST00000564676 TEX261Q6UWH6 196 aa6.79□□□□□ -1.32
CDH1-206ENST00000564676 WFDC10BQ8IUB3 73 aa6.79□□□□□ -1.32
CDH1-206ENST00000564676 NUDT10Q8NFP7 164 aa6.79□□□□□ -1.32
CDH1-206ENST00000564676 NUDT11Q96G61 164 aa6.79□□□□□ -1.32
CDH1-206ENST00000564676 FAM210AQ96ND0 272 aa6.79□□□□□ -1.32
CDH1-206ENST00000564676 GTSF1LQ9H1H1 148 aa6.79□□□□□ -1.32
CDH1-206ENST00000564676 LY96Q9Y6Y9 160 aa6.79□□□□□ -1.32
CDH1-206ENST00000564676 KRTAP9-6A0A140TA67 174 aa6.78□□□□□ -1.32
CDH1-206ENST00000564676 F5H697 171 aa6.78□□□□□ -1.32
CDH1-206ENST00000564676 SMIM17P0DL12 118 aa6.78□□□□□ -1.32
CDH1-206ENST00000564676 BTF3P20290 206 aaKnown RBP6.78□□□□□ -1.32
CDH1-206ENST00000564676 EVI2AP22794 236 aa6.78□□□□□ -1.32
CDH1-206ENST00000564676 CACNG7P62955 275 aa6.78□□□□□ -1.32
CDH1-206ENST00000564676 ZNF56Q15929 161 aa6.78□□□□□ -1.32
CDH1-206ENST00000564676 RNASE7Q9H1E1 156 aaKnown RBP6.78□□□□□ -1.32
CDH1-206ENST00000564676 Q9UF83 564 aa6.78□□□□□ -1.32
CDH1-206ENST00000564676 FAT2Q9NYQ8 4349 aa6.78□□□□□ -1.32
CDH1-206ENST00000564676 IGHV3-38A0A0C4DH36 116 aa6.77□□□□□ -1.33
CDH1-206ENST00000564676 TRBV10-1A0A0K0K1A3 114 aa6.77□□□□□ -1.33
CDH1-206ENST00000564676 F2Z2F3 143 aa6.77□□□□□ -1.33
CDH1-206ENST00000564676 K7EN84 100 aa6.77□□□□□ -1.33
CDH1-206ENST00000564676 NDUFS6O75380 124 aaKnown RBP6.77□□□□□ -1.33
CDH1-206ENST00000564676 IGLC6P0CF74 106 aa6.77□□□□□ -1.33
CDH1-206ENST00000564676 RAB4BP61018 213 aa6.77□□□□□ -1.33
CDH1-206ENST00000564676 LELP1Q5T871 98 aa6.77□□□□□ -1.33
CDH1-206ENST00000564676 AP1S3Q96PC3 154 aa6.77□□□□□ -1.33
CDH1-206ENST00000564676 SMIM7Q9BQ49 75 aa6.77□□□□□ -1.33
CDH1-206ENST00000564676 RPP21Q9H633 154 aaKnown RBP6.77□□□□□ -1.33
CDH1-206ENST00000564676 A0A1B0GVY2 172 aa6.76□□□□□ -1.33
CDH1-206ENST00000564676 ZNF727A8MUV8 499 aa6.76□□□□□ -1.33
CDH1-206ENST00000564676 GATCO43716 136 aaKnown RBP6.76□□□□□ -1.33
CDH1-206ENST00000564676 SRP19P09132 144 aaKnown RBP6.76□□□□□ -1.33
CDH1-206ENST00000564676 DNAH10OSP0CZ25 163 aa6.76□□□□□ -1.33
CDH1-206ENST00000564676 LINC00694P0DN24 101 aa6.76□□□□□ -1.33
CDH1-206ENST00000564676 LINC00315P59091 139 aa6.76□□□□□ -1.33
CDH1-206ENST00000564676 RPL36AP83881 106 aaKnown RBP6.76□□□□□ -1.33
CDH1-206ENST00000564676 LYZL1Q6UWQ5 148 aa6.76□□□□□ -1.33
CDH1-206ENST00000564676 C10orf126Q8N4M7 172 aa6.76□□□□□ -1.33
CDH1-206ENST00000564676 RPL36ALQ969Q0 106 aaKnown RBP6.76□□□□□ -1.33
CDH1-206ENST00000564676 TRBV7-3A0A075B6L6 115 aa6.75□□□□□ -1.33
CDH1-206ENST00000564676 K7EP13 123 aa6.75□□□□□ -1.33
CDH1-206ENST00000564676 MGPP08493 103 aa6.75□□□□□ -1.33
CDH1-206ENST00000564676 TRGC1P0CF51 173 aa6.75□□□□□ -1.33
CDH1-206ENST00000564676 ERVFC1-1P60608 527 aa6.75□□□□□ -1.33
CDH1-206ENST00000564676 PEA15Q15121 130 aa6.75□□□□□ -1.33
CDH1-206ENST00000564676 MSRB1Q9NZV6 116 aa6.75□□□□□ -1.33
CDH1-206ENST00000564676 TNFRSF18Q9Y5U5 241 aa6.75□□□□□ -1.33
CDH1-206ENST00000564676 DYNC1H1Q14204 4646 aaKnown RBP6.74□□□□□ -1.33
CDH1-206ENST00000564676 A0A087WWC5 75 aa6.74□□□□□ -1.33
CDH1-206ENST00000564676 A8MWL6 223 aa6.74□□□□□ -1.33
CDH1-206ENST00000564676 IGHV3-30P01768 117 aa6.74□□□□□ -1.33
CDH1-206ENST00000564676 IGHV3-33P01772 117 aa6.74□□□□□ -1.33
CDH1-206ENST00000564676 IGHV3-30-3P0DP02 117 aa6.74□□□□□ -1.33
CDH1-206ENST00000564676 IGHV3-30-5P0DP03 117 aa6.74□□□□□ -1.33
CDH1-206ENST00000564676 NTF3P20783 257 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms