RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 BCL2P10415 239 aa12.47□□□□□ -0.41
SYNGR3-204ENST00000564642 TAGLN2P37802 199 aaKnown RBP12.47□□□□□ -0.41
SYNGR3-204ENST00000564642 GAGE1Q13065 139 aa12.47□□□□□ -0.41
SYNGR3-204ENST00000564642 GAGE4Q13068 117 aa12.47□□□□□ -0.41
SYNGR3-204ENST00000564642 GAGE5Q13069 117 aa12.47□□□□□ -0.41
SYNGR3-204ENST00000564642 GAGE13Q4V321 117 aa12.47□□□□□ -0.41
SYNGR3-204ENST00000564642 NFE4Q86UQ8 179 aa12.47□□□□□ -0.41
SYNGR3-204ENST00000564642 DAZAP1Q96EP5 407 aaKnown RBP12.47□□□□□ -0.41
SYNGR3-204ENST00000564642 RAB19A4D1S5 217 aa12.46□□□□□ -0.41
SYNGR3-204ENST00000564642 CRYGDP07320 174 aa12.46□□□□□ -0.41
SYNGR3-204ENST00000564642 GNG4P50150 75 aa12.46□□□□□ -0.41
SYNGR3-204ENST00000564642 LELP1Q5T871 98 aa12.46□□□□□ -0.41
SYNGR3-204ENST00000564642 ALKAL2Q6UX46 152 aa12.46□□□□□ -0.41
SYNGR3-204ENST00000564642 C10orf126Q8N4M7 172 aa12.46□□□□□ -0.41
SYNGR3-204ENST00000564642 C14orf178Q8N769 122 aaPredicted RBP12.46□□□□□ -0.41
SYNGR3-204ENST00000564642 TNFRSF18Q9Y5U5 241 aa12.46□□□□□ -0.41
SYNGR3-204ENST00000564642 BLOC1S1P78537 153 aa12.45□□□□□ -0.42
SYNGR3-204ENST00000564642 SMIM12Q96EX1 92 aa12.45□□□□□ -0.42
SYNGR3-204ENST00000564642 MSRB1Q9NZV6 116 aa12.45□□□□□ -0.42
SYNGR3-204ENST00000564642 C16orf90A8MZG2 172 aa12.44□□□□□ -0.42
SYNGR3-204ENST00000564642 SPANXN1Q5VSR9 72 aa12.44□□□□□ -0.42
SYNGR3-204ENST00000564642 Q6ZRN7 208 aaPredicted RBP12.44□□□□□ -0.42
SYNGR3-204ENST00000564642 OR10AG1Q8NH19 301 aa12.44□□□□□ -0.42
SYNGR3-204ENST00000564642 BIN3Q9NQY0 253 aa12.44□□□□□ -0.42
SYNGR3-204ENST00000564642 A0A1B0GVG6 124 aa12.43□□□□□ -0.42
SYNGR3-204ENST00000564642 SNAI2O43623 268 aa12.43□□□□□ -0.42
SYNGR3-204ENST00000564642 IGLV2-8P01709 118 aa12.43□□□□□ -0.42
SYNGR3-204ENST00000564642 OR5AL1P0C617 328 aa12.43□□□□□ -0.42
SYNGR3-204ENST00000564642 LINC01556Q5JQF7 62 aa12.43□□□□□ -0.42
SYNGR3-204ENST00000564642 SPATA12Q7Z6I5 190 aa12.43□□□□□ -0.42
SYNGR3-204ENST00000564642 SSBP4Q9BWG4 385 aaPredicted RBP12.43□□□□□ -0.42
SYNGR3-204ENST00000564642 Q9UF83 564 aa12.43□□□□□ -0.42
SYNGR3-204ENST00000564642 MUC21A0A0G2JKD1 596 aa12.42□□□□□ -0.42
SYNGR3-204ENST00000564642 MUC21A0A140T8X8 626 aa12.42□□□□□ -0.42
SYNGR3-204ENST00000564642 RPS20P60866 119 aaKnown RBP12.42□□□□□ -0.42
SYNGR3-204ENST00000564642 SSTP61278 116 aa12.42□□□□□ -0.42
SYNGR3-204ENST00000564642 OR2D3Q8NGH3 330 aa12.42□□□□□ -0.42
SYNGR3-204ENST00000564642 PKD1P98161 4303 aa12.41□□□□□ -0.42
SYNGR3-204ENST00000564642 EREGO14944 169 aa12.41□□□□□ -0.42
SYNGR3-204ENST00000564642 LINC00694P0DN24 101 aa12.41□□□□□ -0.42
SYNGR3-204ENST00000564642 NKX2-5P52952 324 aaPredicted RBP12.41□□□□□ -0.42
SYNGR3-204ENST00000564642 DNAH11Q96DT5 4516 aa12.4□□□□□ -0.42
SYNGR3-204ENST00000564642 A0A087WWC5 75 aa12.4□□□□□ -0.42
SYNGR3-204ENST00000564642 TRBV10-1A0A0K0K1A3 114 aa12.4□□□□□ -0.42
SYNGR3-204ENST00000564642 XKRY2A2RUG3 117 aa12.4□□□□□ -0.42
SYNGR3-204ENST00000564642 C19orf71A6NCJ1 209 aa12.4□□□□□ -0.42
SYNGR3-204ENST00000564642 P01737 135 aa12.4□□□□□ -0.42
SYNGR3-204ENST00000564642 IGHV3-30P01768 117 aa12.4□□□□□ -0.42
SYNGR3-204ENST00000564642 IGHV3-33P01772 117 aa12.4□□□□□ -0.42
SYNGR3-204ENST00000564642 IGHV3-30-3P0DP02 117 aa12.4□□□□□ -0.42
SYNGR3-204ENST00000564642 IGHV3-30-5P0DP03 117 aa12.4□□□□□ -0.42
SYNGR3-204ENST00000564642 RAB4BP61018 213 aa12.4□□□□□ -0.42
SYNGR3-204ENST00000564642 RPL36AP83881 106 aaKnown RBP12.4□□□□□ -0.42
SYNGR3-204ENST00000564642 ZNF56Q15929 161 aa12.4□□□□□ -0.42
SYNGR3-204ENST00000564642 RPL36ALQ969Q0 106 aaKnown RBP12.4□□□□□ -0.42
SYNGR3-204ENST00000564642 TPPP3Q9BW30 176 aa12.4□□□□□ -0.42
SYNGR3-204ENST00000564642 PKHD1P08F94 4074 aa12.4□□□□□ -0.42
SYNGR3-204ENST00000564642 TRBV20OR9-2A0A075B6H5 130 aa12.39□□□□□ -0.43
SYNGR3-204ENST00000564642 RBFOX3A6NFN3 312 aa12.39□□□□□ -0.43
SYNGR3-204ENST00000564642 GZMBP10144 247 aa12.39□□□□□ -0.43
SYNGR3-204ENST00000564642 ERVFC1-1P60608 527 aa12.39□□□□□ -0.43
SYNGR3-204ENST00000564642 FER1L6-AS1Q8NA97 138 aa12.39□□□□□ -0.43
SYNGR3-204ENST00000564642 IBA57-AS1B1ANH7 110 aa12.38□□□□□ -0.43
SYNGR3-204ENST00000564642 F5H697 171 aa12.38□□□□□ -0.43
SYNGR3-204ENST00000564642 SMIM17P0DL12 118 aa12.38□□□□□ -0.43
SYNGR3-204ENST00000564642 DYNC1H1Q14204 4646 aaKnown RBP12.37□□□□□ -0.43
SYNGR3-204ENST00000564642 TRBV7-3A0A075B6L6 115 aa12.37□□□□□ -0.43
SYNGR3-204ENST00000564642 LYPD6BQ8NI32 183 aa12.37□□□□□ -0.43
SYNGR3-204ENST00000564642 IGLC6P0CF74 106 aa12.36□□□□□ -0.43
SYNGR3-204ENST00000564642 KRTAP10-2P60368 255 aa12.36□□□□□ -0.43
SYNGR3-204ENST00000564642 AP1S3Q96PC3 154 aa12.36□□□□□ -0.43
SYNGR3-204ENST00000564642 F2Z2F3 143 aa12.35□□□□□ -0.43
SYNGR3-204ENST00000564642 TMEM250H0YL14 139 aa12.35□□□□□ -0.43
SYNGR3-204ENST00000564642 PSCAO43653 123 aa12.35□□□□□ -0.43
SYNGR3-204ENST00000564642 CACNG7P62955 275 aa12.35□□□□□ -0.43
SYNGR3-204ENST00000564642 NUDT10Q8NFP7 164 aa12.35□□□□□ -0.43
SYNGR3-204ENST00000564642 OCC1Q8TAD7 63 aa12.35□□□□□ -0.43
SYNGR3-204ENST00000564642 NUDT11Q96G61 164 aa12.35□□□□□ -0.43
SYNGR3-204ENST00000564642 Q9HAA7 133 aa12.35□□□□□ -0.43
SYNGR3-204ENST00000564642 UBE2D3P61077 147 aa12.34□□□□□ -0.43
SYNGR3-204ENST00000564642 UBE2D2P62837 147 aa12.34□□□□□ -0.43
SYNGR3-204ENST00000564642 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.34□□□□□ -0.43
SYNGR3-204ENST00000564642 EIF5A2Q9GZV4 153 aaKnown RBP12.34□□□□□ -0.43
SYNGR3-204ENST00000564642 PGPEP1Q9NXJ5 209 aa12.34□□□□□ -0.43
SYNGR3-204ENST00000564642 URGCP-MRPS24S4R325 110 aa12.34□□□□□ -0.43
SYNGR3-204ENST00000564642 A0A087WTM6 91 aa12.33□□□□□ -0.44
SYNGR3-204ENST00000564642 CEBPGP53567 150 aa12.33□□□□□ -0.44
SYNGR3-204ENST00000564642 OR10G8Q8NGN5 311 aa12.33□□□□□ -0.44
SYNGR3-204ENST00000564642 K7EN84 100 aa12.32□□□□□ -0.44
SYNGR3-204ENST00000564642 LAGE3Q14657 143 aa12.32□□□□□ -0.44
SYNGR3-204ENST00000564642 TOR2AQ5JU69 321 aa12.32□□□□□ -0.44
SYNGR3-204ENST00000564642 LYZL1Q6UWQ5 148 aa12.32□□□□□ -0.44
SYNGR3-204ENST00000564642 NEXN-AS1Q8NBZ9 246 aa12.32□□□□□ -0.44
SYNGR3-204ENST00000564642 RNASE7Q9H1E1 156 aaKnown RBP12.32□□□□□ -0.44
SYNGR3-204ENST00000564642 KIF25-AS1Q9Y6Z4 181 aa12.32□□□□□ -0.44
SYNGR3-204ENST00000564642 MGPP08493 103 aa12.31□□□□□ -0.44
SYNGR3-204ENST00000564642 KCNIP4Q6PIL6 250 aa12.31□□□□□ -0.44
SYNGR3-204ENST00000564642 DAZ4Q86SG3 579 aaKnown RBP12.31□□□□□ -0.44
SYNGR3-204ENST00000564642 Q8N3U1 123 aa12.31□□□□□ -0.44
SYNGR3-204ENST00000564642 KRTAP4-5Q9BYR2 181 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms