RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 A0A096LPF7 62 aa11.61□□□□□ -0.55
RNF40-206ENST00000564260 PNRC1Q12796 327 aaPredicted RBP11.61□□□□□ -0.55
RNF40-206ENST00000564260 OR10AG1Q8NH19 301 aa11.61□□□□□ -0.55
RNF40-206ENST00000564260 ISOC2Q96AB3 205 aa11.61□□□□□ -0.55
RNF40-206ENST00000564260 TRBV10-1A0A0K0K1A3 114 aa11.6□□□□□ -0.55
RNF40-206ENST00000564260 CRYGDP07320 174 aa11.6□□□□□ -0.55
RNF40-206ENST00000564260 TRGC1P0CF51 173 aa11.6□□□□□ -0.55
RNF40-206ENST00000564260 SRIP30626 198 aa11.6□□□□□ -0.55
RNF40-206ENST00000564260 TIRAPP58753 221 aa11.6□□□□□ -0.55
RNF40-206ENST00000564260 RPL23P62829 140 aaKnown RBP11.6□□□□□ -0.55
RNF40-206ENST00000564260 NEGR1Q7Z3B1 354 aa11.6□□□□□ -0.55
RNF40-206ENST00000564260 UBE2DNLQ8IWF7 75 aa11.6□□□□□ -0.55
RNF40-206ENST00000564260 SLC25A29Q8N8R3 303 aa11.6□□□□□ -0.55
RNF40-206ENST00000564260 UPK3BQ9BT76 320 aa11.6□□□□□ -0.55
RNF40-206ENST00000564260 K7EQD1 137 aa11.59□□□□□ -0.55
RNF40-206ENST00000564260 SMIM17P0DL12 118 aa11.59□□□□□ -0.55
RNF40-206ENST00000564260 TSKUQ8WUA8 353 aa11.59□□□□□ -0.55
RNF40-206ENST00000564260 VPS13DQ5THJ4 4388 aa11.59□□□□□ -0.55
RNF40-206ENST00000564260 GZMBP10144 247 aa11.58□□□□□ -0.56
RNF40-206ENST00000564260 GYPEP15421 78 aa11.58□□□□□ -0.56
RNF40-206ENST00000564260 RAB4BP61018 213 aa11.58□□□□□ -0.56
RNF40-206ENST00000564260 ADIRFQ15847 76 aa11.58□□□□□ -0.56
RNF40-206ENST00000564260 LYZL1Q6UWQ5 148 aa11.58□□□□□ -0.56
RNF40-206ENST00000564260 TPPP3Q9BW30 176 aa11.58□□□□□ -0.56
RNF40-206ENST00000564260 BORCS7Q96B45 105 aa11.57□□□□□ -0.56
RNF40-206ENST00000564260 MRPS16Q9Y3D3 137 aaKnown RBP11.57□□□□□ -0.56
RNF40-206ENST00000564260 FAM74A4Q5TZK3 123 aa11.56□□□□□ -0.56
RNF40-206ENST00000564260 OR10G8Q8NGN5 311 aa11.56□□□□□ -0.56
RNF40-206ENST00000564260 GTSF1Q8WW33 167 aa11.56□□□□□ -0.56
RNF40-206ENST00000564260 SAMD10Q9BYL1 202 aa11.56□□□□□ -0.56
RNF40-206ENST00000564260 JPT2Q9H910 190 aa11.56□□□□□ -0.56
RNF40-206ENST00000564260 A0A087WWL8 130 aa11.55□□□□□ -0.56
RNF40-206ENST00000564260 LINC00862A6NCI5 91 aa11.55□□□□□ -0.56
RNF40-206ENST00000564260 PPP1R2P9O14990 202 aa11.55□□□□□ -0.56
RNF40-206ENST00000564260 SMIM15Q7Z3B0 74 aa11.55□□□□□ -0.56
RNF40-206ENST00000564260 LINC00588Q9Y4M8 146 aa11.55□□□□□ -0.56
RNF40-206ENST00000564260 KIF25-AS1Q9Y6Z4 181 aa11.55□□□□□ -0.56
RNF40-206ENST00000564260 V9GYV3 84 aa11.55□□□□□ -0.56
RNF40-206ENST00000564260 IGHV3-73A0A0B4J1V6 119 aa11.54□□□□□ -0.56
RNF40-206ENST00000564260 H7C1H1 209 aa11.54□□□□□ -0.56
RNF40-206ENST00000564260 K7EP13 123 aa11.54□□□□□ -0.56
RNF40-206ENST00000564260 NTF3P20783 257 aa11.54□□□□□ -0.56
RNF40-206ENST00000564260 ESRGQ1W209 222 aa11.54□□□□□ -0.56
RNF40-206ENST00000564260 FRZBQ92765 325 aa11.54□□□□□ -0.56
RNF40-206ENST00000564260 RYR2Q92736 4967 aa11.53□□□□□ -0.56
RNF40-206ENST00000564260 HIGD1CA8MV81 97 aa11.53□□□□□ -0.56
RNF40-206ENST00000564260 LINC00694P0DN24 101 aa11.53□□□□□ -0.56
RNF40-206ENST00000564260 BTF3P20290 206 aaKnown RBP11.53□□□□□ -0.56
RNF40-206ENST00000564260 C14orf178Q8N769 122 aaPredicted RBP11.53□□□□□ -0.56
RNF40-206ENST00000564260 ZNRF2Q8NHG8 242 aa11.53□□□□□ -0.56
RNF40-206ENST00000564260 DPH3P1Q9H4G8 78 aa11.53□□□□□ -0.56
RNF40-206ENST00000564260 NAT8BQ9UHF3 227 aa11.53□□□□□ -0.56
RNF40-206ENST00000564260 A0A1B0GUT8 65 aa11.52□□□□□ -0.57
RNF40-206ENST00000564260 TMEM218A2RU14 115 aa11.52□□□□□ -0.57
RNF40-206ENST00000564260 TWIST1Q15672 202 aa11.52□□□□□ -0.57
RNF40-206ENST00000564260 ZNF56Q15929 161 aa11.52□□□□□ -0.57
RNF40-206ENST00000564260 LYPD5Q6UWN5 251 aa11.52□□□□□ -0.57
RNF40-206ENST00000564260 NACAE9PAV3 2078 aa11.51□□□□□ -0.57
RNF40-206ENST00000564260 A0A1B0GW15 77 aa11.51□□□□□ -0.57
RNF40-206ENST00000564260 LINC00315P59091 139 aa11.51□□□□□ -0.57
RNF40-206ENST00000564260 RPL36AP83881 106 aaKnown RBP11.51□□□□□ -0.57
RNF40-206ENST00000564260 TTC32Q5I0X7 151 aa11.51□□□□□ -0.57
RNF40-206ENST00000564260 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.51□□□□□ -0.57
RNF40-206ENST00000564260 RPL36ALQ969Q0 106 aaKnown RBP11.51□□□□□ -0.57
RNF40-206ENST00000564260 ANAPC16Q96DE5 110 aa11.51□□□□□ -0.57
RNF40-206ENST00000564260 SEC11CQ9BY50 192 aa11.51□□□□□ -0.57
RNF40-206ENST00000564260 DNAH6Q9C0G6 4158 aa11.51□□□□□ -0.57
RNF40-206ENST00000564260 TRBV7-3A0A075B6L6 115 aa11.5□□□□□ -0.57
RNF40-206ENST00000564260 A0A087WWC5 75 aa11.5□□□□□ -0.57
RNF40-206ENST00000564260 MUC21A0A0G2JKD1 596 aa11.5□□□□□ -0.57
RNF40-206ENST00000564260 MUC21A0A140T8X8 626 aa11.5□□□□□ -0.57
RNF40-206ENST00000564260 SMIM27A0A1W2PRY6 76 aa11.5□□□□□ -0.57
RNF40-206ENST00000564260 MT-ND4LP03901 98 aa11.5□□□□□ -0.57
RNF40-206ENST00000564260 Q6ZSN1 163 aa11.5□□□□□ -0.57
RNF40-206ENST00000564260 COMMD7Q86VX2 200 aa11.5□□□□□ -0.57
RNF40-206ENST00000564260 ATP6V0E2Q8NHE4 81 aa11.5□□□□□ -0.57
RNF40-206ENST00000564260 DNAJC30Q96LL9 226 aa11.5□□□□□ -0.57
RNF40-206ENST00000564260 GTSF1LQ9H1H1 148 aa11.5□□□□□ -0.57
RNF40-206ENST00000564260 RYR3Q15413 4870 aa11.5□□□□□ -0.57
RNF40-206ENST00000564260 KMT2AQ03164 3969 aa11.5□□□□□ -0.57
RNF40-206ENST00000564260 F5H697 171 aa11.49□□□□□ -0.57
RNF40-206ENST00000564260 EVI2AP22794 236 aa11.49□□□□□ -0.57
RNF40-206ENST00000564260 RIGQ13278 110 aa11.49□□□□□ -0.57
RNF40-206ENST00000564260 PGLYRP4Q96LB8 373 aa11.49□□□□□ -0.57
RNF40-206ENST00000564260 Q9H8V8 135 aa11.49□□□□□ -0.57
RNF40-206ENST00000564260 MSRB1Q9NZV6 116 aa11.49□□□□□ -0.57
RNF40-206ENST00000564260 LOC100131303A0A0U1RQF7 123 aa11.48□□□□□ -0.57
RNF40-206ENST00000564260 TMEM97Q5BJF2 176 aa11.48□□□□□ -0.57
RNF40-206ENST00000564260 LELP1Q5T871 98 aa11.48□□□□□ -0.57
RNF40-206ENST00000564260 NUP35Q8NFH5 326 aa11.48□□□□□ -0.57
RNF40-206ENST00000564260 TMEM191AQ9H0A3 160 aa11.48□□□□□ -0.57
RNF40-206ENST00000564260 F8W036 122 aa11.47□□□□□ -0.57
RNF40-206ENST00000564260 SIVA1O15304 175 aa11.47□□□□□ -0.57
RNF40-206ENST00000564260 S100A8P05109 93 aa11.47□□□□□ -0.57
RNF40-206ENST00000564260 SSTP61278 116 aa11.47□□□□□ -0.57
RNF40-206ENST00000564260 Q6ZR54 194 aa11.47□□□□□ -0.57
RNF40-206ENST00000564260 TRAV8-6A0A0B4J262 113 aa11.46□□□□□ -0.57
RNF40-206ENST00000564260 GAGE12JA6NER3 117 aa11.46□□□□□ -0.57
RNF40-206ENST00000564260 M0QY20 66 aa11.46□□□□□ -0.57
RNF40-206ENST00000564260 UBE2D3P61077 147 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 184.7 ms