RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 BAGE3Q86Y29 109 aa15.81■□□□□ 0.12
LINC01960-201ENST00000563759 PTH2Q96A98 100 aa15.81■□□□□ 0.12
LINC01960-201ENST00000563759 TRGV1A0A0A0MS02 117 aa15.8■□□□□ 0.12
LINC01960-201ENST00000563759 TRAV26-2A0A0B4J265 109 aa15.8■□□□□ 0.12
LINC01960-201ENST00000563759 NOP10Q9NPE3 64 aaKnown RBP15.8■□□□□ 0.12
LINC01960-201ENST00000563759 KIF25-AS1Q9Y6Z4 181 aa15.8■□□□□ 0.12
LINC01960-201ENST00000563759 U3KQK5 164 aa15.8■□□□□ 0.12
LINC01960-201ENST00000563759 X6R8D5 127 aa15.8■□□□□ 0.12
LINC01960-201ENST00000563759 PLAC8L1A1L4L8 177 aa15.8■□□□□ 0.12
LINC01960-201ENST00000563759 SMIM9A6NGZ8 99 aa15.8■□□□□ 0.12
LINC01960-201ENST00000563759 Q0VG73 95 aa15.8■□□□□ 0.12
LINC01960-201ENST00000563759 IQCJQ1A5X6 159 aa15.8■□□□□ 0.12
LINC01960-201ENST00000563759 Q6ZWC4 215 aa15.8■□□□□ 0.12
LINC01960-201ENST00000563759 C5orf52A6NGY3 159 aa15.79■□□□□ 0.12
LINC01960-201ENST00000563759 A8MWV9 139 aa15.79■□□□□ 0.12
LINC01960-201ENST00000563759 DAZ2Q13117 558 aaKnown RBP15.79■□□□□ 0.12
LINC01960-201ENST00000563759 RASL10AQ92737 203 aa15.79■□□□□ 0.12
LINC01960-201ENST00000563759 MRAP2Q96G30 205 aa15.79■□□□□ 0.12
LINC01960-201ENST00000563759 SAMD10Q9BYL1 202 aa15.79■□□□□ 0.12
LINC01960-201ENST00000563759 F5H697 171 aa15.78■□□□□ 0.12
LINC01960-201ENST00000563759 PRB2P02812 416 aaPredicted RBP15.78■□□□□ 0.12
LINC01960-201ENST00000563759 EMP1P54849 157 aa15.78■□□□□ 0.12
LINC01960-201ENST00000563759 ZNF56Q15929 161 aa15.78■□□□□ 0.12
LINC01960-201ENST00000563759 OR11H2Q8NH07 326 aa15.78■□□□□ 0.12
LINC01960-201ENST00000563759 NDUFAF3Q9BU61 184 aa15.78■□□□□ 0.12
LINC01960-201ENST00000563759 CRYGDP07320 174 aa15.78■□□□□ 0.12
LINC01960-201ENST00000563759 COA6Q5JTJ3 125 aaKnown RBP15.78■□□□□ 0.12
LINC01960-201ENST00000563759 KPRPQ5T749 579 aaPredicted RBP15.77■□□□□ 0.11
LINC01960-201ENST00000563759 Q6ZTI0 123 aa15.77■□□□□ 0.11
LINC01960-201ENST00000563759 RNF183Q96D59 192 aa15.77■□□□□ 0.11
LINC01960-201ENST00000563759 GAS8-AS1O95177 125 aa15.76■□□□□ 0.11
LINC01960-201ENST00000563759 NPYP01303 97 aa15.76■□□□□ 0.11
LINC01960-201ENST00000563759 LINC00315P59091 139 aa15.76■□□□□ 0.11
LINC01960-201ENST00000563759 LGALS9BQ3B8N2 356 aa15.76■□□□□ 0.11
LINC01960-201ENST00000563759 LAMTOR2Q9Y2Q5 125 aa15.76■□□□□ 0.11
LINC01960-201ENST00000563759 PDZD11Q5EBL8 140 aa15.76■□□□□ 0.11
LINC01960-201ENST00000563759 SERF1AO75920 110 aa15.75■□□□□ 0.11
LINC01960-201ENST00000563759 GATA1P15976 413 aaPredicted RBP15.75■□□□□ 0.11
LINC01960-201ENST00000563759 CFAP126Q5VTH2 177 aa15.75■□□□□ 0.11
LINC01960-201ENST00000563759 POM121L12Q8N7R1 296 aa15.74■□□□□ 0.11
LINC01960-201ENST00000563759 IGHV3-73A0A0B4J1V6 119 aa15.74■□□□□ 0.11
LINC01960-201ENST00000563759 TNFRSF6BO95407 300 aa15.74■□□□□ 0.11
LINC01960-201ENST00000563759 HOXA5P20719 270 aa15.74■□□□□ 0.11
LINC01960-201ENST00000563759 SUMO4Q6EEV6 95 aa15.74■□□□□ 0.11
LINC01960-201ENST00000563759 OVOL2Q9BRP0 275 aa15.74■□□□□ 0.11
LINC01960-201ENST00000563759 RHODO00212 210 aa15.73■□□□□ 0.11
LINC01960-201ENST00000563759 MIFP14174 115 aa15.73■□□□□ 0.11
LINC01960-201ENST00000563759 KRTAP21-3Q3LHN1 58 aa15.72■□□□□ 0.11
LINC01960-201ENST00000563759 RNASEKQ6P5S7 137 aaKnown RBP15.72■□□□□ 0.11
LINC01960-201ENST00000563759 MAP1LC3AQ9H492 121 aa15.72■□□□□ 0.11
LINC01960-201ENST00000563759 TRGV2A0A075B6R0 118 aa15.71■□□□□ 0.11
LINC01960-201ENST00000563759 IGHV4-28A0A0C4DH34 117 aa15.71■□□□□ 0.11
LINC01960-201ENST00000563759 LOC389332A0A1B0GUA5 103 aa15.71■□□□□ 0.11
LINC01960-201ENST00000563759 GAGE12BA1L429 117 aa15.71■□□□□ 0.11
LINC01960-201ENST00000563759 RS1O15537 224 aa15.71■□□□□ 0.11
LINC01960-201ENST00000563759 GAGE7O76087 117 aa15.71■□□□□ 0.11
LINC01960-201ENST00000563759 GAGE12FP0CL80 117 aa15.71■□□□□ 0.11
LINC01960-201ENST00000563759 GAGE12GP0CL81 117 aa15.71■□□□□ 0.11
LINC01960-201ENST00000563759 GAGE12IP0CL82 117 aa15.71■□□□□ 0.11
LINC01960-201ENST00000563759 S100A2P29034 98 aa15.71■□□□□ 0.11
LINC01960-201ENST00000563759 LINC00310P59036 64 aa15.71■□□□□ 0.11
LINC01960-201ENST00000563759 NRACQ8N912 160 aa15.71■□□□□ 0.11
LINC01960-201ENST00000563759 OR4C5Q8NGB2 326 aa15.71■□□□□ 0.11
LINC01960-201ENST00000563759 K7EIL1 84 aa15.71■□□□□ 0.11
LINC01960-201ENST00000563759 HIST3H2BBQ8N257 126 aa15.71■□□□□ 0.11
LINC01960-201ENST00000563759 UFSP1Q6NVU6 142 aa15.7■□□□□ 0.1
LINC01960-201ENST00000563759 PRSS3P2Q8NHM4 247 aa15.7■□□□□ 0.1
LINC01960-201ENST00000563759 RPL39LQ96EH5 51 aaKnown RBP15.7■□□□□ 0.1
LINC01960-201ENST00000563759 NUPR1O60356 82 aa15.69■□□□□ 0.1
LINC01960-201ENST00000563759 PPP1R17O96001 155 aa15.69■□□□□ 0.1
LINC01960-201ENST00000563759 NIT1Q86X76 327 aa15.69■□□□□ 0.1
LINC01960-201ENST00000563759 Q8NAQ8 132 aa15.69■□□□□ 0.1
LINC01960-201ENST00000563759 TP53TG1Q9Y2A0 90 aa15.69■□□□□ 0.1
LINC01960-201ENST00000563759 TRAV4A0A0B4J268 109 aa15.69■□□□□ 0.1
LINC01960-201ENST00000563759 DEFB4AO15263 64 aa15.69■□□□□ 0.1
LINC01960-201ENST00000563759 RETNQ9HD89 108 aa15.69■□□□□ 0.1
LINC01960-201ENST00000563759 IFI27P40305 119 aaPredicted RBP15.68■□□□□ 0.1
LINC01960-201ENST00000563759 DEFB121Q5J5C9 76 aa15.68■□□□□ 0.1
LINC01960-201ENST00000563759 ZFP2Q6ZN57 461 aa15.68■□□□□ 0.1
LINC01960-201ENST00000563759 FA2HQ7L5A8 372 aa15.68■□□□□ 0.1
LINC01960-201ENST00000563759 H7C1H1 209 aa15.67■□□□□ 0.1
LINC01960-201ENST00000563759 IGHV3-53P01767 116 aa15.67■□□□□ 0.1
LINC01960-201ENST00000563759 ZNF479Q96JC4 524 aa15.67■□□□□ 0.1
LINC01960-201ENST00000563759 M0QY20 66 aa15.67■□□□□ 0.1
LINC01960-201ENST00000563759 HSBP1O75506 76 aa15.67■□□□□ 0.1
LINC01960-201ENST00000563759 LINC00614P0C842 121 aa15.67■□□□□ 0.1
LINC01960-201ENST00000563759 DEFB130BP0DP73 79 aa15.67■□□□□ 0.1
LINC01960-201ENST00000563759 DEFB130AP0DP74 79 aa15.67■□□□□ 0.1
LINC01960-201ENST00000563759 ESDP10768 282 aa15.67■□□□□ 0.1
LINC01960-201ENST00000563759 URB1-AS1Q96HZ7 61 aa15.67■□□□□ 0.1
LINC01960-201ENST00000563759 FAM222AQ5U5X8 452 aa15.66■□□□□ 0.1
LINC01960-201ENST00000563759 CHCHD1Q96BP2 118 aaKnown RBP15.66■□□□□ 0.1
LINC01960-201ENST00000563759 AP5S1Q9NUS5 200 aa15.66■□□□□ 0.1
LINC01960-201ENST00000563759 LYRM9A8MSI8 78 aa15.65■□□□□ 0.1
LINC01960-201ENST00000563759 PMCHP20382 165 aa15.65■□□□□ 0.1
LINC01960-201ENST00000563759 SUMO2P61956 95 aaKnown RBP15.65■□□□□ 0.1
LINC01960-201ENST00000563759 FABP4P15090 132 aa15.65■□□□□ 0.1
LINC01960-201ENST00000563759 C20orf78Q9BR46 151 aa15.65■□□□□ 0.1
LINC01960-201ENST00000563759 NXT2Q9NPJ8 142 aaKnown RBP15.65■□□□□ 0.1
LINC01960-201ENST00000563759 IFITM10A6NMD0 228 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms