RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 C11orf71Q6IPW1 123 aa8□□□□□ -1.13
RNF40-204ENST00000563683 CNFNQ9BYD5 112 aa8□□□□□ -1.13
RNF40-204ENST00000563683 MAPKAPK5-AS1Q8N8E1 139 aa7.99□□□□□ -1.13
RNF40-204ENST00000563683 RPL39LQ96EH5 51 aaKnown RBP7.99□□□□□ -1.13
RNF40-204ENST00000563683 PEMTQ9UBM1 199 aa7.99□□□□□ -1.13
RNF40-204ENST00000563683 TP53TG1Q9Y2A0 90 aa7.99□□□□□ -1.13
RNF40-204ENST00000563683 C20orf78Q9BR46 151 aa7.99□□□□□ -1.13
RNF40-204ENST00000563683 RBAKDNA6NC62 111 aa7.99□□□□□ -1.13
RNF40-204ENST00000563683 K7EMI3 77 aa7.99□□□□□ -1.13
RNF40-204ENST00000563683 C10orf105Q8TEF2 133 aa7.99□□□□□ -1.13
RNF40-204ENST00000563683 SMAD5-AS1Q9Y6J3 95 aa7.99□□□□□ -1.13
RNF40-204ENST00000563683 MYMXA0A1B0GTQ4 84 aa7.98□□□□□ -1.13
RNF40-204ENST00000563683 ZNF462Q96JM2 2506 aa7.98□□□□□ -1.13
RNF40-204ENST00000563683 A0A1W2PPR1 153 aa7.98□□□□□ -1.13
RNF40-204ENST00000563683 SDHAF1A6NFY7 115 aa7.98□□□□□ -1.13
RNF40-204ENST00000563683 INSL3P51460 131 aa7.98□□□□□ -1.13
RNF40-204ENST00000563683 UBE2E2Q96LR5 201 aa7.98□□□□□ -1.13
RNF40-204ENST00000563683 TRBV7-3A0A075B6L6 115 aa7.98□□□□□ -1.13
RNF40-204ENST00000563683 TRAV2A0A0B4J234 112 aa7.98□□□□□ -1.13
RNF40-204ENST00000563683 IGF1P05019 195 aa7.98□□□□□ -1.13
RNF40-204ENST00000563683 KLHL30-AS1Q8NEE0 82 aa7.98□□□□□ -1.13
RNF40-204ENST00000563683 PGPEP1Q9NXJ5 209 aa7.98□□□□□ -1.13
RNF40-204ENST00000563683 EPG5Q9HCE0 2579 aa7.98□□□□□ -1.13
RNF40-204ENST00000563683 CD28P10747 220 aa7.98□□□□□ -1.13
RNF40-204ENST00000563683 DEFB136Q30KP8 78 aa7.98□□□□□ -1.13
RNF40-204ENST00000563683 LOC400499M0QZD8 3231 aa7.97□□□□□ -1.13
RNF40-204ENST00000563683 TRGV11A0A075B6L2 103 aa7.97□□□□□ -1.13
RNF40-204ENST00000563683 A0A0U1RRA0 63 aa7.97□□□□□ -1.13
RNF40-204ENST00000563683 STHQ8IWL8 128 aa7.97□□□□□ -1.13
RNF40-204ENST00000563683 PF4P02776 101 aa7.97□□□□□ -1.13
RNF40-204ENST00000563683 CFAP126Q5VTH2 177 aa7.97□□□□□ -1.13
RNF40-204ENST00000563683 PPDPFLQ8WWR9 84 aa7.97□□□□□ -1.13
RNF40-204ENST00000563683 JMJD1CQ15652 2540 aa7.97□□□□□ -1.13
RNF40-204ENST00000563683 AKAP13Q12802 2813 aa7.97□□□□□ -1.13
RNF40-204ENST00000563683 TRAV12-1A0A0B4J245 112 aa7.97□□□□□ -1.13
RNF40-204ENST00000563683 F8VRH5 84 aa7.97□□□□□ -1.13
RNF40-204ENST00000563683 GATA3P23771 443 aa7.97□□□□□ -1.13
RNF40-204ENST00000563683 EBI3Q14213 229 aa7.97□□□□□ -1.13
RNF40-204ENST00000563683 PRRC2AP48634 2157 aaKnown RBP7.97□□□□□ -1.13
RNF40-204ENST00000563683 UBE2L6O14933 153 aa7.96□□□□□ -1.14
RNF40-204ENST00000563683 ADGRG4Q8IZF6 3080 aa7.96□□□□□ -1.14
RNF40-204ENST00000563683 FN1P02751 2386 aaKnown RBP7.96□□□□□ -1.14
RNF40-204ENST00000563683 IGHV3-53P01767 116 aa7.96□□□□□ -1.14
RNF40-204ENST00000563683 Q6ZUT4 128 aa7.96□□□□□ -1.14
RNF40-204ENST00000563683 CDIP1Q9H305 208 aa7.96□□□□□ -1.14
RNF40-204ENST00000563683 TMEM262E9PQX1 116 aa7.95□□□□□ -1.14
RNF40-204ENST00000563683 MRPL53Q96EL3 112 aaKnown RBP7.95□□□□□ -1.14
RNF40-204ENST00000563683 Q96MF0 132 aa7.95□□□□□ -1.14
RNF40-204ENST00000563683 ZFAND3Q9H8U3 227 aa7.95□□□□□ -1.14
RNF40-204ENST00000563683 COL27A1Q8IZC6 1860 aaPredicted RBP7.95□□□□□ -1.14
RNF40-204ENST00000563683 C9orf47Q6ZRZ4 202 aa7.95□□□□□ -1.14
RNF40-204ENST00000563683 ERG28Q9UKR5 140 aa7.95□□□□□ -1.14
RNF40-204ENST00000563683 IGLV2-18A0A075B6J9 118 aa7.95□□□□□ -1.14
RNF40-204ENST00000563683 TRGV2A0A075B6R0 118 aa7.95□□□□□ -1.14
RNF40-204ENST00000563683 MEIG1Q5JSS6 88 aa7.95□□□□□ -1.14
RNF40-204ENST00000563683 PRADC1Q9BSG0 188 aa7.95□□□□□ -1.14
RNF40-204ENST00000563683 XCL2Q9UBD3 114 aa7.95□□□□□ -1.14
RNF40-204ENST00000563683 LENEPQ9Y5L5 61 aa7.95□□□□□ -1.14
RNF40-204ENST00000563683 IGHV1OR15-1A0A075B7D0 117 aa7.94□□□□□ -1.14
RNF40-204ENST00000563683 IGHV3-16A0A0C4DH30 117 aa7.94□□□□□ -1.14
RNF40-204ENST00000563683 GAS8-AS1O95177 125 aa7.94□□□□□ -1.14
RNF40-204ENST00000563683 IGHG2P01859 326 aa7.94□□□□□ -1.14
RNF40-204ENST00000563683 NPC2P61916 151 aa7.94□□□□□ -1.14
RNF40-204ENST00000563683 MORN3Q6PF18 240 aaPredicted RBP7.94□□□□□ -1.14
RNF40-204ENST00000563683 ANAPC13Q9BS18 74 aa7.94□□□□□ -1.14
RNF40-204ENST00000563683 SPXQ9BT56 116 aa7.94□□□□□ -1.14
RNF40-204ENST00000563683 PRSS29PA6NIE9 313 aa7.94□□□□□ -1.14
RNF40-204ENST00000563683 C19orf54Q5BKX5 351 aa7.94□□□□□ -1.14
RNF40-204ENST00000563683 Q8N6K4 173 aa7.94□□□□□ -1.14
RNF40-204ENST00000563683 TRBV20-1A0A075B6N2 111 aa7.94□□□□□ -1.14
RNF40-204ENST00000563683 TSPAN13O95857 204 aa7.94□□□□□ -1.14
RNF40-204ENST00000563683 MT-ATP8P03928 68 aa7.94□□□□□ -1.14
RNF40-204ENST00000563683 COX6CP09669 75 aa7.94□□□□□ -1.14
RNF40-204ENST00000563683 RPL13AP40429 203 aaKnown RBP7.94□□□□□ -1.14
RNF40-204ENST00000563683 TEN1Q86WV5 123 aa7.94□□□□□ -1.14
RNF40-204ENST00000563683 JPT2Q9H910 190 aa7.94□□□□□ -1.14
RNF40-204ENST00000563683 LINC01549A6NIU2 74 aa7.93□□□□□ -1.14
RNF40-204ENST00000563683 WDFY3Q8IZQ1 3526 aa7.93□□□□□ -1.14
RNF40-204ENST00000563683 TRGV1A0A0A0MS02 117 aa7.93□□□□□ -1.14
RNF40-204ENST00000563683 HOXD3P31249 432 aaPredicted RBP7.93□□□□□ -1.14
RNF40-204ENST00000563683 ZFAND6Q6FIF0 208 aa7.93□□□□□ -1.14
RNF40-204ENST00000563683 Q6ZQT7 251 aa7.93□□□□□ -1.14
RNF40-204ENST00000563683 A8MWV9 139 aa7.93□□□□□ -1.14
RNF40-204ENST00000563683 H3BUA1 57 aa7.93□□□□□ -1.14
RNF40-204ENST00000563683 LGALS1P09382 135 aaKnown RBP7.93□□□□□ -1.14
RNF40-204ENST00000563683 CIRBPQ14011 172 aaKnown RBP7.93□□□□□ -1.14
RNF40-204ENST00000563683 TOMM7Q9P0U1 55 aa7.93□□□□□ -1.14
RNF40-204ENST00000563683 MUC3AQ02505 3323 aa7.92□□□□□ -1.14
RNF40-204ENST00000563683 ACANP16112 2415 aa7.92□□□□□ -1.14
RNF40-204ENST00000563683 FASNP49327 2511 aaKnown RBP7.92□□□□□ -1.14
RNF40-204ENST00000563683 XGP55808 180 aa7.92□□□□□ -1.14
RNF40-204ENST00000563683 NSUN5P1Q3KNT7 163 aa7.92□□□□□ -1.14
RNF40-204ENST00000563683 IGHV3-38A0A0C4DH36 116 aa7.92□□□□□ -1.14
RNF40-204ENST00000563683 F8W735 103 aaPredicted RBP7.92□□□□□ -1.14
RNF40-204ENST00000563683 GAGE5Q13069 117 aa7.92□□□□□ -1.14
RNF40-204ENST00000563683 GAGE6Q13070 117 aa7.92□□□□□ -1.14
RNF40-204ENST00000563683 PMVKQ15126 192 aa7.92□□□□□ -1.14
RNF40-204ENST00000563683 Q6ZS46 218 aa7.92□□□□□ -1.14
RNF40-204ENST00000563683 NFE4Q86UQ8 179 aa7.92□□□□□ -1.14
RNF40-204ENST00000563683 C20orf173Q96LM9 149 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms