RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 SFRP2Q96HF1 295 aa5.87□□□□□ -1.47
UBR1-204ENST00000563239 UPK3BQ9BT76 320 aa5.87□□□□□ -1.47
UBR1-204ENST00000563239 PHLDA3Q9Y5J5 127 aa5.87□□□□□ -1.47
UBR1-204ENST00000563239 DNAH11Q96DT5 4516 aa5.87□□□□□ -1.47
UBR1-204ENST00000563239 MUC21A0A0G2JKD1 596 aa5.86□□□□□ -1.47
UBR1-204ENST00000563239 MUC21A0A140T8X8 626 aa5.86□□□□□ -1.47
UBR1-204ENST00000563239 M0R381 172 aa5.86□□□□□ -1.47
UBR1-204ENST00000563239 RTL8CO15255 209 aa5.86□□□□□ -1.47
UBR1-204ENST00000563239 OR5AL1P0C617 328 aa5.86□□□□□ -1.47
UBR1-204ENST00000563239 IGLC6P0CF74 106 aa5.86□□□□□ -1.47
UBR1-204ENST00000563239 SRSF3P84103 164 aaKnown RBP5.86□□□□□ -1.47
UBR1-204ENST00000563239 ZFP82Q8N141 532 aa5.86□□□□□ -1.47
UBR1-204ENST00000563239 C14orf178Q8N769 122 aaPredicted RBP5.86□□□□□ -1.47
UBR1-204ENST00000563239 SYT8Q8NBV8 401 aa5.86□□□□□ -1.47
UBR1-204ENST00000563239 NUDT10Q8NFP7 164 aa5.86□□□□□ -1.47
UBR1-204ENST00000563239 NUDT11Q96G61 164 aa5.86□□□□□ -1.47
UBR1-204ENST00000563239 KRTAP1-5Q9BYS1 174 aa5.86□□□□□ -1.47
UBR1-204ENST00000563239 EIF5A2Q9GZV4 153 aaKnown RBP5.86□□□□□ -1.47
UBR1-204ENST00000563239 Q9H8V8 135 aa5.86□□□□□ -1.47
UBR1-204ENST00000563239 A0A087WWL8 130 aa5.85□□□□□ -1.47
UBR1-204ENST00000563239 NBDYA0A0U1RRE5 68 aa5.85□□□□□ -1.47
UBR1-204ENST00000563239 P01737 135 aa5.85□□□□□ -1.47
UBR1-204ENST00000563239 LINC00694P0DN24 101 aa5.85□□□□□ -1.47
UBR1-204ENST00000563239 RHOHQ15669 191 aa5.85□□□□□ -1.47
UBR1-204ENST00000563239 NEGR1Q7Z3B1 354 aa5.85□□□□□ -1.47
UBR1-204ENST00000563239 OR2D3Q8NGH3 330 aa5.85□□□□□ -1.47
UBR1-204ENST00000563239 RNASE7Q9H1E1 156 aaKnown RBP5.85□□□□□ -1.47
UBR1-204ENST00000563239 SRIP30626 198 aa5.84□□□□□ -1.47
UBR1-204ENST00000563239 CEBPGP53567 150 aa5.84□□□□□ -1.47
UBR1-204ENST00000563239 LINC00315P59091 139 aa5.84□□□□□ -1.47
UBR1-204ENST00000563239 RPS20P60866 119 aaKnown RBP5.84□□□□□ -1.47
UBR1-204ENST00000563239 DAZAP1Q96EP5 407 aaKnown RBP5.84□□□□□ -1.47
UBR1-204ENST00000563239 BIN3Q9NQY0 253 aa5.84□□□□□ -1.47
UBR1-204ENST00000563239 LY96Q9Y6Y9 160 aa5.84□□□□□ -1.47
UBR1-204ENST00000563239 KIF25-AS1Q9Y6Z4 181 aa5.84□□□□□ -1.47
UBR1-204ENST00000563239 RHODO00212 210 aa5.83□□□□□ -1.48
UBR1-204ENST00000563239 TIRAPP58753 221 aa5.83□□□□□ -1.48
UBR1-204ENST00000563239 SSTP61278 116 aa5.83□□□□□ -1.48
UBR1-204ENST00000563239 IFITM2Q01629 132 aa5.83□□□□□ -1.48
UBR1-204ENST00000563239 FAM74A4Q5TZK3 123 aa5.83□□□□□ -1.48
UBR1-204ENST00000563239 FAM231DQ6ZW35 169 aa5.83□□□□□ -1.48
UBR1-204ENST00000563239 LINC01551Q86U37 167 aa5.83□□□□□ -1.48
UBR1-204ENST00000563239 FER1L6-AS1Q8NA97 138 aa5.83□□□□□ -1.48
UBR1-204ENST00000563239 GTSF1Q8WW33 167 aa5.83□□□□□ -1.48
UBR1-204ENST00000563239 SMIM7Q9BQ49 75 aa5.83□□□□□ -1.48
UBR1-204ENST00000563239 PRADC1Q9BSG0 188 aa5.83□□□□□ -1.48
UBR1-204ENST00000563239 RPP21Q9H633 154 aaKnown RBP5.83□□□□□ -1.48
UBR1-204ENST00000563239 MSRB1Q9NZV6 116 aa5.83□□□□□ -1.48
UBR1-204ENST00000563239 GAGE12JA6NER3 117 aa5.82□□□□□ -1.48
UBR1-204ENST00000563239 ZNF727A8MUV8 499 aa5.82□□□□□ -1.48
UBR1-204ENST00000563239 CTRLP40313 264 aa5.82□□□□□ -1.48
UBR1-204ENST00000563239 GAGE1Q13065 139 aa5.82□□□□□ -1.48
UBR1-204ENST00000563239 GAGE4Q13068 117 aa5.82□□□□□ -1.48
UBR1-204ENST00000563239 GAGE5Q13069 117 aa5.82□□□□□ -1.48
UBR1-204ENST00000563239 GAGE13Q4V321 117 aa5.82□□□□□ -1.48
UBR1-204ENST00000563239 SPANXN1Q5VSR9 72 aa5.82□□□□□ -1.48
UBR1-204ENST00000563239 LYZL1Q6UWQ5 148 aa5.82□□□□□ -1.48
UBR1-204ENST00000563239 SH2D6Q7Z4S9 175 aa5.82□□□□□ -1.48
UBR1-204ENST00000563239 WFDC10BQ8IUB3 73 aa5.82□□□□□ -1.48
UBR1-204ENST00000563239 CNFNQ9BYD5 112 aa5.82□□□□□ -1.48
UBR1-204ENST00000563239 PKHD1P08F94 4074 aa5.82□□□□□ -1.48
UBR1-204ENST00000563239 DYNC1H1Q14204 4646 aaKnown RBP5.82□□□□□ -1.48
UBR1-204ENST00000563239 A0A1B0GVY2 172 aa5.81□□□□□ -1.48
UBR1-204ENST00000563239 F2Z2F3 143 aa5.81□□□□□ -1.48
UBR1-204ENST00000563239 SIVA1O15304 175 aa5.81□□□□□ -1.48
UBR1-204ENST00000563239 RAB4BP61018 213 aa5.81□□□□□ -1.48
UBR1-204ENST00000563239 PEA15Q15121 130 aa5.81□□□□□ -1.48
UBR1-204ENST00000563239 C1orf134Q5TEV5 83 aa5.81□□□□□ -1.48
UBR1-204ENST00000563239 WDR73Q6P4I2 378 aa5.81□□□□□ -1.48
UBR1-204ENST00000563239 ATP6V0E2Q8NHE4 81 aa5.81□□□□□ -1.48
UBR1-204ENST00000563239 TPPP3Q9BW30 176 aa5.81□□□□□ -1.48
UBR1-204ENST00000563239 SMDT1Q9H4I9 107 aa5.81□□□□□ -1.48
UBR1-204ENST00000563239 TRBV10-1A0A0K0K1A3 114 aa5.8□□□□□ -1.48
UBR1-204ENST00000563239 A0A1W2PPQ1 181 aa5.8□□□□□ -1.48
UBR1-204ENST00000563239 XKRY2A2RUG3 117 aa5.8□□□□□ -1.48
UBR1-204ENST00000563239 GATCO43716 136 aaKnown RBP5.8□□□□□ -1.48
UBR1-204ENST00000563239 DNAH10OSP0CZ25 163 aa5.8□□□□□ -1.48
UBR1-204ENST00000563239 NTF3P20783 257 aa5.8□□□□□ -1.48
UBR1-204ENST00000563239 EVI2AP22794 236 aa5.8□□□□□ -1.48
UBR1-204ENST00000563239 FOXA3P55318 350 aaPredicted RBP5.8□□□□□ -1.48
UBR1-204ENST00000563239 ERVFC1-1P60608 527 aa5.8□□□□□ -1.48
UBR1-204ENST00000563239 RPL23P62829 140 aaKnown RBP5.8□□□□□ -1.48
UBR1-204ENST00000563239 CACNG7P62955 275 aa5.8□□□□□ -1.48
UBR1-204ENST00000563239 TMEM241Q24JQ0 296 aa5.8□□□□□ -1.48
UBR1-204ENST00000563239 FAM74A3Q4VXF1 159 aa5.8□□□□□ -1.48
UBR1-204ENST00000563239 CT83Q5H943 113 aa5.8□□□□□ -1.48
UBR1-204ENST00000563239 LINC00336Q6ZUF6 198 aa5.8□□□□□ -1.48
UBR1-204ENST00000563239 C6orf223Q8N319 242 aa5.8□□□□□ -1.48
UBR1-204ENST00000563239 OR10G8Q8NGN5 311 aa5.8□□□□□ -1.48
UBR1-204ENST00000563239 GTSF1LQ9H1H1 148 aa5.8□□□□□ -1.48
UBR1-204ENST00000563239 OSTCQ9NRP0 149 aa5.8□□□□□ -1.48
UBR1-204ENST00000563239 PRSS29PA6NIE9 313 aa5.79□□□□□ -1.48
UBR1-204ENST00000563239 UBE2D3P61077 147 aa5.79□□□□□ -1.48
UBR1-204ENST00000563239 UBE2D2P62837 147 aa5.79□□□□□ -1.48
UBR1-204ENST00000563239 TTC32Q5I0X7 151 aa5.79□□□□□ -1.48
UBR1-204ENST00000563239 CLLU1Q5K131 121 aa5.79□□□□□ -1.48
UBR1-204ENST00000563239 LELP1Q5T871 98 aa5.79□□□□□ -1.48
UBR1-204ENST00000563239 LCE2CQ5TA81 110 aa5.79□□□□□ -1.48
UBR1-204ENST00000563239 Q6ZRN7 208 aaPredicted RBP5.79□□□□□ -1.48
UBR1-204ENST00000563239 NEXN-AS1Q8NBZ9 246 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms