RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 TRAV26-1A0A087WT03 109 aa13.22□□□□□ -0.29
RAB40C-207ENST00000563109 A0A087WWL8 130 aa13.22□□□□□ -0.29
RAB40C-207ENST00000563109 SMIM27A0A1W2PRY6 76 aa13.22□□□□□ -0.29
RAB40C-207ENST00000563109 NTF3P20783 257 aa13.22□□□□□ -0.29
RAB40C-207ENST00000563109 TCTAP57738 103 aa13.22□□□□□ -0.29
RAB40C-207ENST00000563109 SLC7A5P1Q8MH63 180 aa13.22□□□□□ -0.29
RAB40C-207ENST00000563109 HHLA3Q9XRX5 114 aa13.22□□□□□ -0.29
RAB40C-207ENST00000563109 A0A0J9YY99 117 aa13.21□□□□□ -0.29
RAB40C-207ENST00000563109 PAX4O43316 350 aa13.21□□□□□ -0.29
RAB40C-207ENST00000563109 SMIM15Q7Z3B0 74 aa13.21□□□□□ -0.29
RAB40C-207ENST00000563109 C15orf53Q8NAA6 179 aa13.21□□□□□ -0.29
RAB40C-207ENST00000563109 SAMD10Q9BYL1 202 aa13.21□□□□□ -0.29
RAB40C-207ENST00000563109 A0A1B0GUT8 65 aa13.2□□□□□ -0.3
RAB40C-207ENST00000563109 APOC3P02656 99 aa13.2□□□□□ -0.3
RAB40C-207ENST00000563109 GATA1P15976 413 aaPredicted RBP13.2□□□□□ -0.3
RAB40C-207ENST00000563109 CRYBA4P53673 196 aa13.2□□□□□ -0.3
RAB40C-207ENST00000563109 RHEBQ15382 184 aa13.2□□□□□ -0.3
RAB40C-207ENST00000563109 C14orf178Q8N769 122 aaPredicted RBP13.2□□□□□ -0.3
RAB40C-207ENST00000563109 NUP35Q8NFH5 326 aa13.2□□□□□ -0.3
RAB40C-207ENST00000563109 CTDSP1Q9GZU7 261 aa13.2□□□□□ -0.3
RAB40C-207ENST00000563109 MSRB1Q9NZV6 116 aa13.2□□□□□ -0.3
RAB40C-207ENST00000563109 H3BNG1 76 aa13.19□□□□□ -0.3
RAB40C-207ENST00000563109 CRYGDP07320 174 aa13.19□□□□□ -0.3
RAB40C-207ENST00000563109 RIGQ13278 110 aa13.19□□□□□ -0.3
RAB40C-207ENST00000563109 ZNF56Q15929 161 aa13.19□□□□□ -0.3
RAB40C-207ENST00000563109 SVBPQ8N300 66 aa13.19□□□□□ -0.3
RAB40C-207ENST00000563109 CLRN3Q8NCR9 226 aa13.19□□□□□ -0.3
RAB40C-207ENST00000563109 NUDT3O95989 172 aa13.18□□□□□ -0.3
RAB40C-207ENST00000563109 RHOHQ15669 191 aa13.18□□□□□ -0.3
RAB40C-207ENST00000563109 UFSP1Q6NVU6 142 aa13.18□□□□□ -0.3
RAB40C-207ENST00000563109 PRADC1Q9BSG0 188 aa13.18□□□□□ -0.3
RAB40C-207ENST00000563109 DPH3P1Q9H4G8 78 aa13.18□□□□□ -0.3
RAB40C-207ENST00000563109 TRBV6-4A0A1B0GX49 114 aa13.17□□□□□ -0.3
RAB40C-207ENST00000563109 SNAPINO95295 136 aa13.17□□□□□ -0.3
RAB40C-207ENST00000563109 MGPP08493 103 aa13.17□□□□□ -0.3
RAB40C-207ENST00000563109 ICOSQ9Y6W8 199 aa13.17□□□□□ -0.3
RAB40C-207ENST00000563109 F5H697 171 aa13.16□□□□□ -0.3
RAB40C-207ENST00000563109 K7EQD1 137 aa13.16□□□□□ -0.3
RAB40C-207ENST00000563109 RAB4BP61018 213 aa13.16□□□□□ -0.3
RAB40C-207ENST00000563109 SLC25A29Q8N8R3 303 aa13.16□□□□□ -0.3
RAB40C-207ENST00000563109 VSIG2Q96IQ7 327 aa13.16□□□□□ -0.3
RAB40C-207ENST00000563109 RPS10P5Q9NQ39 176 aa13.16□□□□□ -0.3
RAB40C-207ENST00000563109 APLNQ9ULZ1 77 aa13.16□□□□□ -0.3
RAB40C-207ENST00000563109 CSMD3Q7Z407 3707 aa13.15□□□□□ -0.3
RAB40C-207ENST00000563109 A0A1B0GW15 77 aa13.15□□□□□ -0.3
RAB40C-207ENST00000563109 C7orf77A4D0Y5 90 aa13.15□□□□□ -0.3
RAB40C-207ENST00000563109 EVI2AP22794 236 aa13.15□□□□□ -0.3
RAB40C-207ENST00000563109 KCNIP4Q6PIL6 250 aa13.15□□□□□ -0.3
RAB40C-207ENST00000563109 IMMP2LQ96T52 175 aa13.15□□□□□ -0.3
RAB40C-207ENST00000563109 KIF25-AS1Q9Y6Z4 181 aa13.15□□□□□ -0.3
RAB40C-207ENST00000563109 STARD9Q9P2P6 4700 aa13.14□□□□□ -0.31
RAB40C-207ENST00000563109 A0A087WWC5 75 aa13.14□□□□□ -0.31
RAB40C-207ENST00000563109 S100A8P05109 93 aa13.14□□□□□ -0.31
RAB40C-207ENST00000563109 GYPEP15421 78 aa13.14□□□□□ -0.31
RAB40C-207ENST00000563109 DYNC2H1Q8NCM8 4307 aaKnown RBP13.14□□□□□ -0.31
RAB40C-207ENST00000563109 S100PP25815 95 aa13.13□□□□□ -0.31
RAB40C-207ENST00000563109 FAM3BP58499 235 aaPredicted RBP13.13□□□□□ -0.31
RAB40C-207ENST00000563109 MRPL23Q16540 153 aaKnown RBP13.13□□□□□ -0.31
RAB40C-207ENST00000563109 MRPL54Q6P161 138 aaKnown RBP13.13□□□□□ -0.31
RAB40C-207ENST00000563109 TMEM242Q9NWH2 141 aa13.13□□□□□ -0.31
RAB40C-207ENST00000563109 H7C1H1 209 aa13.12□□□□□ -0.31
RAB40C-207ENST00000563109 SRIP30626 198 aa13.12□□□□□ -0.31
RAB40C-207ENST00000563109 HBBP68871 147 aa13.12□□□□□ -0.31
RAB40C-207ENST00000563109 Q6ZSN1 163 aa13.12□□□□□ -0.31
RAB40C-207ENST00000563109 ATP5L2Q7Z4Y8 100 aa13.12□□□□□ -0.31
RAB40C-207ENST00000563109 BTF3L4Q96K17 158 aa13.12□□□□□ -0.31
RAB40C-207ENST00000563109 TRBV10-1A0A0K0K1A3 114 aa13.11□□□□□ -0.31
RAB40C-207ENST00000563109 CAMPP49913 170 aa13.11□□□□□ -0.31
RAB40C-207ENST00000563109 TMEM191AQ9H0A3 160 aa13.11□□□□□ -0.31
RAB40C-207ENST00000563109 A0A096LPF7 62 aa13.1□□□□□ -0.31
RAB40C-207ENST00000563109 LOC100131303A0A0U1RQF7 123 aa13.1□□□□□ -0.31
RAB40C-207ENST00000563109 LINC00315P59091 139 aa13.1□□□□□ -0.31
RAB40C-207ENST00000563109 SH2D6Q7Z4S9 175 aa13.1□□□□□ -0.31
RAB40C-207ENST00000563109 TRAV9-1A0A075B6T8 112 aa13.09□□□□□ -0.31
RAB40C-207ENST00000563109 P0DMU3 169 aa13.09□□□□□ -0.31
RAB40C-207ENST00000563109 FAM231AP0DMU4 169 aa13.09□□□□□ -0.31
RAB40C-207ENST00000563109 FAM231CP0DMU5 169 aa13.09□□□□□ -0.31
RAB40C-207ENST00000563109 SUMO4Q6EEV6 95 aa13.09□□□□□ -0.31
RAB40C-207ENST00000563109 A0A1B0GXF2 115 aa13.08□□□□□ -0.32
RAB40C-207ENST00000563109 GAGE12JA6NER3 117 aa13.08□□□□□ -0.32
RAB40C-207ENST00000563109 RPL36AP83881 106 aaKnown RBP13.08□□□□□ -0.32
RAB40C-207ENST00000563109 GAGE1Q13065 139 aa13.08□□□□□ -0.32
RAB40C-207ENST00000563109 GAGE4Q13068 117 aa13.08□□□□□ -0.32
RAB40C-207ENST00000563109 GAGE5Q13069 117 aa13.08□□□□□ -0.32
RAB40C-207ENST00000563109 GAGE13Q4V321 117 aa13.08□□□□□ -0.32
RAB40C-207ENST00000563109 NEGR1Q7Z3B1 354 aa13.08□□□□□ -0.32
RAB40C-207ENST00000563109 UBE2DNLQ8IWF7 75 aa13.08□□□□□ -0.32
RAB40C-207ENST00000563109 RPL36ALQ969Q0 106 aaKnown RBP13.08□□□□□ -0.32
RAB40C-207ENST00000563109 CCL18P55774 89 aa13.07□□□□□ -0.32
RAB40C-207ENST00000563109 URGCP-MRPS24S4R325 110 aa13.07□□□□□ -0.32
RAB40C-207ENST00000563109 RASL11AQ6T310 242 aa13.06□□□□□ -0.32
RAB40C-207ENST00000563109 AMN1Q8IY45 258 aa13.06□□□□□ -0.32
RAB40C-207ENST00000563109 M0QY20 66 aa13.05□□□□□ -0.32
RAB40C-207ENST00000563109 LGALS9CQ6DKI2 356 aa13.05□□□□□ -0.32
RAB40C-207ENST00000563109 ZNRF2Q8NHG8 242 aa13.05□□□□□ -0.32
RAB40C-207ENST00000563109 FRZBQ92765 325 aa13.05□□□□□ -0.32
RAB40C-207ENST00000563109 TRBV7-3A0A075B6L6 115 aa13.04□□□□□ -0.32
RAB40C-207ENST00000563109 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.04□□□□□ -0.32
RAB40C-207ENST00000563109 GATD1Q8NB37 220 aa13.04□□□□□ -0.32
RAB40C-207ENST00000563109 NEXN-AS1Q8NBZ9 246 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms