RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 TPT1P13693 172 aaKnown RBP10.5□□□□□ -0.73
SF3B3-203ENST00000562874 GCSHP23434 173 aa10.5□□□□□ -0.73
SF3B3-203ENST00000562874 WFDC2Q14508 124 aa10.5□□□□□ -0.73
SF3B3-203ENST00000562874 PIK3CD-AS1Q5SR53 167 aa10.5□□□□□ -0.73
SF3B3-203ENST00000562874 DNLZQ5SXM8 178 aa10.5□□□□□ -0.73
SF3B3-203ENST00000562874 COX8CQ7Z4L0 72 aa10.5□□□□□ -0.73
SF3B3-203ENST00000562874 DAZ4Q86SG3 579 aaKnown RBP10.5□□□□□ -0.73
SF3B3-203ENST00000562874 SFT2D1Q8WV19 159 aa10.5□□□□□ -0.73
SF3B3-203ENST00000562874 DAZ3Q9NR90 486 aaKnown RBP10.5□□□□□ -0.73
SF3B3-203ENST00000562874 TRBV6-1A0A0K0K1D8 114 aa10.49□□□□□ -0.73
SF3B3-203ENST00000562874 KANTRA0A1W2PQU2 76 aa10.49□□□□□ -0.73
SF3B3-203ENST00000562874 RHODO00212 210 aa10.49□□□□□ -0.73
SF3B3-203ENST00000562874 TCEAL7Q9BRU2 100 aa10.49□□□□□ -0.73
SF3B3-203ENST00000562874 FAT1Q14517 4588 aa10.49□□□□□ -0.73
SF3B3-203ENST00000562874 LECT2O14960 151 aa10.48□□□□□ -0.73
SF3B3-203ENST00000562874 SEC11BP0C7V7 166 aa10.48□□□□□ -0.73
SF3B3-203ENST00000562874 Q5VSD8 79 aa10.48□□□□□ -0.73
SF3B3-203ENST00000562874 ZFP82Q8N141 532 aa10.48□□□□□ -0.73
SF3B3-203ENST00000562874 Q8N814 137 aa10.48□□□□□ -0.73
SF3B3-203ENST00000562874 SFRP2Q96HF1 295 aa10.48□□□□□ -0.73
SF3B3-203ENST00000562874 PFDN1O60925 122 aa10.47□□□□□ -0.73
SF3B3-203ENST00000562874 LAGE3Q14657 143 aa10.47□□□□□ -0.73
SF3B3-203ENST00000562874 PRR27Q6MZM9 219 aa10.47□□□□□ -0.73
SF3B3-203ENST00000562874 MBD3L1Q8WWY6 194 aa10.47□□□□□ -0.73
SF3B3-203ENST00000562874 DNAJC30Q96LL9 226 aa10.47□□□□□ -0.73
SF3B3-203ENST00000562874 MUC21A0A0G2JKD1 596 aa10.46□□□□□ -0.73
SF3B3-203ENST00000562874 MUC21A0A140T8X8 626 aa10.46□□□□□ -0.73
SF3B3-203ENST00000562874 HMSDA8MTL9 139 aa10.46□□□□□ -0.73
SF3B3-203ENST00000562874 UMAD1C9J7I0 102 aa10.46□□□□□ -0.73
SF3B3-203ENST00000562874 SMR3BP02814 79 aaPredicted RBP10.46□□□□□ -0.73
SF3B3-203ENST00000562874 OR10AG1Q8NH19 301 aa10.46□□□□□ -0.73
SF3B3-203ENST00000562874 BOLA1Q9Y3E2 137 aa10.46□□□□□ -0.73
SF3B3-203ENST00000562874 A0A0D9SG52 128 aa10.45□□□□□ -0.74
SF3B3-203ENST00000562874 H2AFB1P0C5Y9 115 aa10.44□□□□□ -0.74
SF3B3-203ENST00000562874 ZNF56Q15929 161 aa10.44□□□□□ -0.74
SF3B3-203ENST00000562874 TMUB2Q71RG4 321 aa10.44□□□□□ -0.74
SF3B3-203ENST00000562874 BAGE2Q86Y30 109 aa10.44□□□□□ -0.74
SF3B3-203ENST00000562874 NTN5Q8WTR8 489 aaPredicted RBP10.44□□□□□ -0.74
SF3B3-203ENST00000562874 FRZBQ92765 325 aa10.44□□□□□ -0.74
SF3B3-203ENST00000562874 DERL1Q9BUN8 251 aa10.44□□□□□ -0.74
SF3B3-203ENST00000562874 DNAH8Q96JB1 4490 aa10.44□□□□□ -0.74
SF3B3-203ENST00000562874 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.43□□□□□ -0.74
SF3B3-203ENST00000562874 A0A087WWC5 75 aa10.43□□□□□ -0.74
SF3B3-203ENST00000562874 SSTP61278 116 aa10.43□□□□□ -0.74
SF3B3-203ENST00000562874 URGCP-MRPS24S4R325 110 aa10.43□□□□□ -0.74
SF3B3-203ENST00000562874 UBE2D3P61077 147 aa10.42□□□□□ -0.74
SF3B3-203ENST00000562874 UBE2D2P62837 147 aa10.42□□□□□ -0.74
SF3B3-203ENST00000562874 CCL20P78556 96 aa10.42□□□□□ -0.74
SF3B3-203ENST00000562874 RPL36AP83881 106 aaKnown RBP10.42□□□□□ -0.74
SF3B3-203ENST00000562874 NIT1Q86X76 327 aa10.42□□□□□ -0.74
SF3B3-203ENST00000562874 RPL36ALQ969Q0 106 aaKnown RBP10.42□□□□□ -0.74
SF3B3-203ENST00000562874 MLST8Q9BVC4 326 aa10.42□□□□□ -0.74
SF3B3-203ENST00000562874 TM2D2Q9BX73 214 aa10.42□□□□□ -0.74
SF3B3-203ENST00000562874 GNG13Q9P2W3 67 aa10.42□□□□□ -0.74
SF3B3-203ENST00000562874 KLK12Q9UKR0 248 aa10.42□□□□□ -0.74
SF3B3-203ENST00000562874 TRAV8-3A0A0A6YYJ7 113 aa10.41□□□□□ -0.74
SF3B3-203ENST00000562874 S100A9P06702 114 aaKnown RBP10.41□□□□□ -0.74
SF3B3-203ENST00000562874 RPL35P42766 123 aaKnown RBP10.41□□□□□ -0.74
SF3B3-203ENST00000562874 BAALCQ8WXS3 180 aa10.41□□□□□ -0.74
SF3B3-203ENST00000562874 FAM30AQ9NZY2 134 aa10.41□□□□□ -0.74
SF3B3-203ENST00000562874 IGKV2D-24A0A075B6R9 120 aa10.4□□□□□ -0.74
SF3B3-203ENST00000562874 TRBV10-1A0A0K0K1A3 114 aa10.4□□□□□ -0.74
SF3B3-203ENST00000562874 SNAI2O43623 268 aa10.4□□□□□ -0.74
SF3B3-203ENST00000562874 CXCL1P09341 107 aa10.4□□□□□ -0.74
SF3B3-203ENST00000562874 INAFM2P0DMQ5 153 aa10.4□□□□□ -0.74
SF3B3-203ENST00000562874 EIF5AP63241 154 aaKnown RBP10.4□□□□□ -0.74
SF3B3-203ENST00000562874 TOR2AQ5JU69 321 aa10.4□□□□□ -0.74
SF3B3-203ENST00000562874 SPANXN1Q5VSR9 72 aa10.4□□□□□ -0.74
SF3B3-203ENST00000562874 NEXN-AS1Q8NBZ9 246 aa10.4□□□□□ -0.74
SF3B3-203ENST00000562874 TMEM70Q9BUB7 260 aa10.4□□□□□ -0.74
SF3B3-203ENST00000562874 TRBV7-3A0A075B6L6 115 aa10.39□□□□□ -0.75
SF3B3-203ENST00000562874 GZMBP10144 247 aa10.39□□□□□ -0.75
SF3B3-203ENST00000562874 LINC01620Q4KN68 170 aa10.39□□□□□ -0.75
SF3B3-203ENST00000562874 CENPWQ5EE01 88 aa10.39□□□□□ -0.75
SF3B3-203ENST00000562874 UBE2WQ96B02 151 aa10.39□□□□□ -0.75
SF3B3-203ENST00000562874 MANBALQ9NQG1 85 aa10.39□□□□□ -0.75
SF3B3-203ENST00000562874 VPS13BQ7Z7G8 4022 aa10.38□□□□□ -0.75
SF3B3-203ENST00000562874 A0A087WX48 190 aa10.38□□□□□ -0.75
SF3B3-203ENST00000562874 RBFOX3A6NFN3 312 aa10.38□□□□□ -0.75
SF3B3-203ENST00000562874 RAB4BP61018 213 aa10.38□□□□□ -0.75
SF3B3-203ENST00000562874 C11orf52Q96A22 123 aa10.38□□□□□ -0.75
SF3B3-203ENST00000562874 F5H697 171 aa10.37□□□□□ -0.75
SF3B3-203ENST00000562874 OR5AL1P0C617 328 aa10.37□□□□□ -0.75
SF3B3-203ENST00000562874 OR10G8Q8NGN5 311 aa10.37□□□□□ -0.75
SF3B3-203ENST00000562874 TPPP3Q9BW30 176 aa10.37□□□□□ -0.75
SF3B3-203ENST00000562874 FLG2Q5D862 2391 aaPredicted RBP10.37□□□□□ -0.75
SF3B3-203ENST00000562874 RAB19A4D1S5 217 aa10.36□□□□□ -0.75
SF3B3-203ENST00000562874 IGLV2-8P01709 118 aa10.36□□□□□ -0.75
SF3B3-203ENST00000562874 MPV17L2Q567V2 206 aa10.36□□□□□ -0.75
SF3B3-203ENST00000562874 KCNIP4Q6PIL6 250 aa10.36□□□□□ -0.75
SF3B3-203ENST00000562874 RMI2Q96E14 147 aa10.36□□□□□ -0.75
SF3B3-203ENST00000562874 AP1S3Q96PC3 154 aa10.36□□□□□ -0.75
SF3B3-203ENST00000562874 SSBP4Q9BWG4 385 aaPredicted RBP10.36□□□□□ -0.75
SF3B3-203ENST00000562874 TRBV6-8A0A0A6YYG3 113 aa10.35□□□□□ -0.75
SF3B3-203ENST00000562874 TMEM262E9PQX1 116 aa10.35□□□□□ -0.75
SF3B3-203ENST00000562874 MGPP08493 103 aa10.35□□□□□ -0.75
SF3B3-203ENST00000562874 C15orf54Q8N8G6 183 aa10.35□□□□□ -0.75
SF3B3-203ENST00000562874 SULT1A2P50226 295 aa10.34□□□□□ -0.75
SF3B3-203ENST00000562874 CLPSL2Q6UWE3 100 aa10.34□□□□□ -0.75
SF3B3-203ENST00000562874 OR2D3Q8NGH3 330 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms