RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 SAMD10Q9BYL1 202 aa9.29□□□□□ -0.92
CDH1-204ENST00000562118 FAM231BA6NCW3 169 aa9.28□□□□□ -0.92
CDH1-204ENST00000562118 K7EQD1 137 aa9.28□□□□□ -0.92
CDH1-204ENST00000562118 LY6G6CO95867 125 aa9.28□□□□□ -0.92
CDH1-204ENST00000562118 CEBPGP53567 150 aa9.28□□□□□ -0.92
CDH1-204ENST00000562118 LINC00315P59091 139 aa9.28□□□□□ -0.92
CDH1-204ENST00000562118 SOHLH1Q5JUK2 328 aa9.28□□□□□ -0.92
CDH1-204ENST00000562118 UQCC3Q6UW78 93 aa9.28□□□□□ -0.92
CDH1-204ENST00000562118 Q6ZSN1 163 aa9.28□□□□□ -0.92
CDH1-204ENST00000562118 SLC25A29Q8N8R3 303 aa9.28□□□□□ -0.92
CDH1-204ENST00000562118 DNAH17Q9UFH2 4485 aa9.28□□□□□ -0.92
CDH1-204ENST00000562118 M0R381 172 aa9.27□□□□□ -0.93
CDH1-204ENST00000562118 NUDT3O95989 172 aa9.27□□□□□ -0.93
CDH1-204ENST00000562118 CACNG7P62955 275 aa9.27□□□□□ -0.93
CDH1-204ENST00000562118 RHOHQ15669 191 aa9.27□□□□□ -0.93
CDH1-204ENST00000562118 GFRA4Q9GZZ7 299 aa9.27□□□□□ -0.93
CDH1-204ENST00000562118 LINC00588Q9Y4M8 146 aa9.27□□□□□ -0.93
CDH1-204ENST00000562118 ICOSQ9Y6W8 199 aa9.27□□□□□ -0.93
CDH1-204ENST00000562118 V9GYV3 84 aa9.27□□□□□ -0.93
CDH1-204ENST00000562118 FAT2Q9NYQ8 4349 aa9.27□□□□□ -0.93
CDH1-204ENST00000562118 LINC00862A6NCI5 91 aa9.26□□□□□ -0.93
CDH1-204ENST00000562118 GATCO43716 136 aaKnown RBP9.26□□□□□ -0.93
CDH1-204ENST00000562118 TIRAPP58753 221 aa9.26□□□□□ -0.93
CDH1-204ENST00000562118 ERVFC1-1P60608 527 aa9.26□□□□□ -0.93
CDH1-204ENST00000562118 MRPL23Q16540 153 aaKnown RBP9.26□□□□□ -0.93
CDH1-204ENST00000562118 ESRGQ1W209 222 aa9.26□□□□□ -0.93
CDH1-204ENST00000562118 LYZL1Q6UWQ5 148 aa9.26□□□□□ -0.93
CDH1-204ENST00000562118 ZNRF2Q8NHG8 242 aa9.26□□□□□ -0.93
CDH1-204ENST00000562118 A8MWL6 223 aa9.25□□□□□ -0.93
CDH1-204ENST00000562118 GYPEP15421 78 aa9.25□□□□□ -0.93
CDH1-204ENST00000562118 SPANXN1Q5VSR9 72 aa9.25□□□□□ -0.93
CDH1-204ENST00000562118 SH2D6Q7Z4S9 175 aa9.25□□□□□ -0.93
CDH1-204ENST00000562118 TSKUQ8WUA8 353 aa9.25□□□□□ -0.93
CDH1-204ENST00000562118 MRPS16Q9Y3D3 137 aaKnown RBP9.25□□□□□ -0.93
CDH1-204ENST00000562118 TRBV10-1A0A0K0K1A3 114 aa9.24□□□□□ -0.93
CDH1-204ENST00000562118 LOC100131303A0A0U1RQF7 123 aa9.24□□□□□ -0.93
CDH1-204ENST00000562118 RAB4BP61018 213 aa9.24□□□□□ -0.93
CDH1-204ENST00000562118 OR10G8Q8NGN5 311 aa9.24□□□□□ -0.93
CDH1-204ENST00000562118 AP1S3Q96PC3 154 aa9.24□□□□□ -0.93
CDH1-204ENST00000562118 MSRB1Q9NZV6 116 aa9.24□□□□□ -0.93
CDH1-204ENST00000562118 A0A087WWL8 130 aa9.23□□□□□ -0.93
CDH1-204ENST00000562118 IGHV3-73A0A0B4J1V6 119 aa9.23□□□□□ -0.93
CDH1-204ENST00000562118 ADCYAP1P18509 176 aa9.23□□□□□ -0.93
CDH1-204ENST00000562118 CCL18P55774 89 aa9.23□□□□□ -0.93
CDH1-204ENST00000562118 PNRC1Q12796 327 aaPredicted RBP9.23□□□□□ -0.93
CDH1-204ENST00000562118 ADIRFQ15847 76 aa9.23□□□□□ -0.93
CDH1-204ENST00000562118 LYPD5Q6UWN5 251 aa9.23□□□□□ -0.93
CDH1-204ENST00000562118 Q6ZR54 194 aa9.23□□□□□ -0.93
CDH1-204ENST00000562118 NEGR1Q7Z3B1 354 aa9.23□□□□□ -0.93
CDH1-204ENST00000562118 C14orf178Q8N769 122 aaPredicted RBP9.23□□□□□ -0.93
CDH1-204ENST00000562118 PRADC1Q9BSG0 188 aa9.23□□□□□ -0.93
CDH1-204ENST00000562118 Q9UF83 564 aa9.23□□□□□ -0.93
CDH1-204ENST00000562118 HECTD4Q9Y4D8 3996 aa9.22□□□□□ -0.93
CDH1-204ENST00000562118 MUC21A0A0G2JKD1 596 aa9.22□□□□□ -0.93
CDH1-204ENST00000562118 MUC21A0A140T8X8 626 aa9.22□□□□□ -0.93
CDH1-204ENST00000562118 SMIM27A0A1W2PRY6 76 aa9.22□□□□□ -0.93
CDH1-204ENST00000562118 NTF3P20783 257 aa9.22□□□□□ -0.93
CDH1-204ENST00000562118 SRIP30626 198 aa9.22□□□□□ -0.93
CDH1-204ENST00000562118 C15orf54Q8N8G6 183 aa9.22□□□□□ -0.93
CDH1-204ENST00000562118 TMEM218A2RU14 115 aa9.21□□□□□ -0.94
CDH1-204ENST00000562118 TRGC1P0CF51 173 aa9.21□□□□□ -0.94
CDH1-204ENST00000562118 FAM74A4Q5TZK3 123 aa9.21□□□□□ -0.94
CDH1-204ENST00000562118 HIGD1CA8MV81 97 aa9.2□□□□□ -0.94
CDH1-204ENST00000562118 EVI2AP22794 236 aa9.2□□□□□ -0.94
CDH1-204ENST00000562118 C10orf91Q5T1B1 145 aa9.2□□□□□ -0.94
CDH1-204ENST00000562118 TPPP3Q9BW30 176 aa9.2□□□□□ -0.94
CDH1-204ENST00000562118 COMMD7Q86VX2 200 aa9.19□□□□□ -0.94
CDH1-204ENST00000562118 UBE2DNLQ8IWF7 75 aa9.19□□□□□ -0.94
CDH1-204ENST00000562118 NUP35Q8NFH5 326 aa9.19□□□□□ -0.94
CDH1-204ENST00000562118 SEC11CQ9BY50 192 aa9.19□□□□□ -0.94
CDH1-204ENST00000562118 DPH3P1Q9H4G8 78 aa9.19□□□□□ -0.94
CDH1-204ENST00000562118 A0A1B0GUT8 65 aa9.18□□□□□ -0.94
CDH1-204ENST00000562118 M0QY20 66 aa9.18□□□□□ -0.94
CDH1-204ENST00000562118 UBE2D3P61077 147 aa9.18□□□□□ -0.94
CDH1-204ENST00000562118 UBE2D2P62837 147 aa9.18□□□□□ -0.94
CDH1-204ENST00000562118 NEXN-AS1Q8NBZ9 246 aa9.18□□□□□ -0.94
CDH1-204ENST00000562118 GTSF1LQ9H1H1 148 aa9.18□□□□□ -0.94
CDH1-204ENST00000562118 NAT8BQ9UHF3 227 aa9.18□□□□□ -0.94
CDH1-204ENST00000562118 PKD1P98161 4303 aa9.17□□□□□ -0.94
CDH1-204ENST00000562118 TRBV7-3A0A075B6L6 115 aa9.17□□□□□ -0.94
CDH1-204ENST00000562118 PPP1R2P9O14990 202 aa9.17□□□□□ -0.94
CDH1-204ENST00000562118 SMIM17P0DL12 118 aa9.17□□□□□ -0.94
CDH1-204ENST00000562118 TWIST1Q15672 202 aa9.17□□□□□ -0.94
CDH1-204ENST00000562118 ZNF56Q15929 161 aa9.17□□□□□ -0.94
CDH1-204ENST00000562118 FRZBQ92765 325 aa9.17□□□□□ -0.94
CDH1-204ENST00000562118 PGLYRP4Q96LB8 373 aa9.17□□□□□ -0.94
CDH1-204ENST00000562118 Q9H8V8 135 aa9.17□□□□□ -0.94
CDH1-204ENST00000562118 NBDYA0A0U1RRE5 68 aa9.16□□□□□ -0.94
CDH1-204ENST00000562118 GAGE12JA6NER3 117 aa9.16□□□□□ -0.94
CDH1-204ENST00000562118 DNAH10OSP0CZ25 163 aa9.16□□□□□ -0.94
CDH1-204ENST00000562118 BTF3P20290 206 aaKnown RBP9.16□□□□□ -0.94
CDH1-204ENST00000562118 GAGE1Q13065 139 aa9.16□□□□□ -0.94
CDH1-204ENST00000562118 GAGE4Q13068 117 aa9.16□□□□□ -0.94
CDH1-204ENST00000562118 GAGE5Q13069 117 aa9.16□□□□□ -0.94
CDH1-204ENST00000562118 GAGE13Q4V321 117 aa9.16□□□□□ -0.94
CDH1-204ENST00000562118 LELP1Q5T871 98 aa9.16□□□□□ -0.94
CDH1-204ENST00000562118 SUMO4Q6EEV6 95 aa9.16□□□□□ -0.94
CDH1-204ENST00000562118 GATD1Q8NB37 220 aa9.16□□□□□ -0.94
CDH1-204ENST00000562118 ATP6V0E2Q8NHE4 81 aa9.16□□□□□ -0.94
CDH1-204ENST00000562118 ANAPC16Q96DE5 110 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms