RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 ATP6V0E1O15342 81 aa14.09□□□□□ -0.15
BBS4-204ENST00000562084 DUSP14O95147 198 aaKnown RBP14.09□□□□□ -0.15
BBS4-204ENST00000562084 P0DMU3 169 aa14.09□□□□□ -0.15
BBS4-204ENST00000562084 FAM231AP0DMU4 169 aa14.09□□□□□ -0.15
BBS4-204ENST00000562084 FAM231CP0DMU5 169 aa14.09□□□□□ -0.15
BBS4-204ENST00000562084 CITED1Q99966 193 aa14.09□□□□□ -0.15
BBS4-204ENST00000562084 PKDREJQ9NTG1 2253 aa14.09□□□□□ -0.15
BBS4-204ENST00000562084 C19orf84I3L1E1 186 aa14.08□□□□□ -0.16
BBS4-204ENST00000562084 SRD5A1P18405 259 aa14.08□□□□□ -0.16
BBS4-204ENST00000562084 GAGE5Q13069 117 aa14.08□□□□□ -0.16
BBS4-204ENST00000562084 GAGE6Q13070 117 aa14.08□□□□□ -0.16
BBS4-204ENST00000562084 TP53TG1Q9Y2A0 90 aa14.08□□□□□ -0.16
BBS4-204ENST00000562084 ROS1P08922 2347 aa14.08□□□□□ -0.16
BBS4-204ENST00000562084 A0A0B4J2C4 111 aa14.08□□□□□ -0.16
BBS4-204ENST00000562084 VCYO14598 125 aa14.08□□□□□ -0.16
BBS4-204ENST00000562084 SLC25A20O43772 301 aa14.08□□□□□ -0.16
BBS4-204ENST00000562084 TSHBP01222 138 aa14.08□□□□□ -0.16
BBS4-204ENST00000562084 Q6ZQT7 251 aa14.08□□□□□ -0.16
BBS4-204ENST00000562084 FAM19A4Q96LR4 140 aa14.08□□□□□ -0.16
BBS4-204ENST00000562084 KIR2DL4Q99706 377 aa14.07□□□□□ -0.16
BBS4-204ENST00000562084 SPANXA1Q9NS26 97 aa14.07□□□□□ -0.16
BBS4-204ENST00000562084 USP9YO00507 2555 aaPredicted RBP14.07□□□□□ -0.16
BBS4-204ENST00000562084 DOPEY2Q9Y3R5 2298 aa14.07□□□□□ -0.16
BBS4-204ENST00000562084 IGHV3OR16-13A0A075B7E8 117 aa14.06□□□□□ -0.16
BBS4-204ENST00000562084 IGHV3-74A0A0B4J1X5 117 aa14.06□□□□□ -0.16
BBS4-204ENST00000562084 LGALS3P17931 250 aaKnown RBP14.06□□□□□ -0.16
BBS4-204ENST00000562084 POLR2KP53803 58 aaKnown RBP14.06□□□□□ -0.16
BBS4-204ENST00000562084 ANXA2RQ3ZCQ2 193 aa14.06□□□□□ -0.16
BBS4-204ENST00000562084 ZNF876PQ49A33 203 aa14.06□□□□□ -0.16
BBS4-204ENST00000562084 SFTA2Q6UW10 78 aa14.06□□□□□ -0.16
BBS4-204ENST00000562084 FAM223BA6NKX1 122 aa14.06□□□□□ -0.16
BBS4-204ENST00000562084 J3QQQ9 107 aa14.06□□□□□ -0.16
BBS4-204ENST00000562084 FAM223AQ8IWN6 122 aa14.06□□□□□ -0.16
BBS4-204ENST00000562084 LINC01560Q8TB33 94 aa14.06□□□□□ -0.16
BBS4-204ENST00000562084 C20orf173Q96LM9 149 aa14.06□□□□□ -0.16
BBS4-204ENST00000562084 ANKHD1Q8IWZ3 2542 aaKnown RBP14.05□□□□□ -0.16
BBS4-204ENST00000562084 Q6Q795 121 aa14.05□□□□□ -0.16
BBS4-204ENST00000562084 AMELXQ99217 191 aa14.05□□□□□ -0.16
BBS4-204ENST00000562084 KIF25-AS1Q9Y6Z4 181 aa14.05□□□□□ -0.16
BBS4-204ENST00000562084 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.04□□□□□ -0.16
BBS4-204ENST00000562084 RHODO00212 210 aa14.04□□□□□ -0.16
BBS4-204ENST00000562084 LEPROTO15243 131 aa14.04□□□□□ -0.16
BBS4-204ENST00000562084 RNASE3P12724 160 aaKnown RBP14.04□□□□□ -0.16
BBS4-204ENST00000562084 Q6ZS46 218 aa14.04□□□□□ -0.16
BBS4-204ENST00000562084 SIRPDQ9H106 197 aa14.04□□□□□ -0.16
BBS4-204ENST00000562084 IGHV3-49A0A0A0MS15 119 aa14.03□□□□□ -0.16
BBS4-204ENST00000562084 TRBV6-5A0A0K0K1A5 114 aa14.03□□□□□ -0.16
BBS4-204ENST00000562084 SOCS3O14543 225 aa14.03□□□□□ -0.16
BBS4-204ENST00000562084 IGHV1-69P01742 117 aa14.03□□□□□ -0.16
BBS4-204ENST00000562084 IGHV3-33P01772 117 aa14.03□□□□□ -0.16
BBS4-204ENST00000562084 UBE2E1P51965 193 aa14.03□□□□□ -0.16
BBS4-204ENST00000562084 LINC00315P59091 139 aa14.03□□□□□ -0.16
BBS4-204ENST00000562084 TMEM170BQ5T4T1 132 aa14.03□□□□□ -0.16
BBS4-204ENST00000562084 A0A0J9YX75 114 aa14.02□□□□□ -0.16
BBS4-204ENST00000562084 SNCGO76070 127 aa14.02□□□□□ -0.16
BBS4-204ENST00000562084 TSPEAR-AS2P59090 65 aa14.02□□□□□ -0.16
BBS4-204ENST00000562084 ATXN8Q156A1 80 aa14.02□□□□□ -0.16
BBS4-204ENST00000562084 TMEM263Q8WUH6 116 aaKnown RBP14.02□□□□□ -0.16
BBS4-204ENST00000562084 C9JAW5 83 aa14.01□□□□□ -0.17
BBS4-204ENST00000562084 IGF1P05019 195 aa14.01□□□□□ -0.17
BBS4-204ENST00000562084 GAGE2BQ13066 116 aa14.01□□□□□ -0.17
BBS4-204ENST00000562084 GAGE2EQ4V326 116 aa14.01□□□□□ -0.17
BBS4-204ENST00000562084 GAGE2DQ9UEU5 116 aa14.01□□□□□ -0.17
BBS4-204ENST00000562084 TRBV27A0A0K0K1C4 114 aa14.01□□□□□ -0.17
BBS4-204ENST00000562084 ARL3P36405 182 aa14.01□□□□□ -0.17
BBS4-204ENST00000562084 RPL13AP40429 203 aaKnown RBP14.01□□□□□ -0.17
BBS4-204ENST00000562084 AJUBAQ96IF1 538 aa14.01□□□□□ -0.17
BBS4-204ENST00000562084 NDUFA4O00483 81 aa14□□□□□ -0.17
BBS4-204ENST00000562084 RNASE4P34096 147 aaKnown RBP14□□□□□ -0.17
BBS4-204ENST00000562084 RHOHQ15669 191 aa14□□□□□ -0.17
BBS4-204ENST00000562084 A4D1N5 150 aa13.99□□□□□ -0.17
BBS4-204ENST00000562084 LINC01548A6NM66 108 aa13.99□□□□□ -0.17
BBS4-204ENST00000562084 G3V318 75 aa13.99□□□□□ -0.17
BBS4-204ENST00000562084 CRIP2P52943 208 aaPredicted RBP13.99□□□□□ -0.17
BBS4-204ENST00000562084 ZNRF2Q8NHG8 242 aa13.99□□□□□ -0.17
BBS4-204ENST00000562084 SDHAF1A6NFY7 115 aa13.99□□□□□ -0.17
BBS4-204ENST00000562084 J3KRW8 73 aa13.99□□□□□ -0.17
BBS4-204ENST00000562084 SUMO4Q6EEV6 95 aa13.99□□□□□ -0.17
BBS4-204ENST00000562084 TMEM223A0PJW6 202 aa13.98□□□□□ -0.17
BBS4-204ENST00000562084 LGALS9O00182 355 aa13.98□□□□□ -0.17
BBS4-204ENST00000562084 NSUN5P1Q3KNT7 163 aa13.98□□□□□ -0.17
BBS4-204ENST00000562084 C11orf71Q6IPW1 123 aa13.98□□□□□ -0.17
BBS4-204ENST00000562084 CRYBG3Q68DQ2 2970 aa13.98□□□□□ -0.17
BBS4-204ENST00000562084 GNRH2O43555 120 aa13.97□□□□□ -0.17
BBS4-204ENST00000562084 MRPL23Q16540 153 aaKnown RBP13.97□□□□□ -0.17
BBS4-204ENST00000562084 DCHS2Q6V1P9 2916 aa13.97□□□□□ -0.17
BBS4-204ENST00000562084 ABCA4P78363 2273 aa13.97□□□□□ -0.17
BBS4-204ENST00000562084 LY6HO94772 140 aa13.97□□□□□ -0.17
BBS4-204ENST00000562084 NDUFV3P56181 108 aaKnown RBP13.97□□□□□ -0.17
BBS4-204ENST00000562084 PTPN13Q12923 2485 aa13.96□□□□□ -0.17
BBS4-204ENST00000562084 TRBV30A0A0K0K1B3 111 aa13.96□□□□□ -0.17
BBS4-204ENST00000562084 EMP1P54849 157 aa13.96□□□□□ -0.17
BBS4-204ENST00000562084 LINC01620Q4KN68 170 aa13.96□□□□□ -0.17
BBS4-204ENST00000562084 C19orf54Q5BKX5 351 aa13.96□□□□□ -0.17
BBS4-204ENST00000562084 C5orf56Q8N8D9 126 aa13.96□□□□□ -0.17
BBS4-204ENST00000562084 TRAV41A0A0B4J266 112 aa13.95□□□□□ -0.18
BBS4-204ENST00000562084 TRBV10-2A0A0K0K1G8 114 aa13.95□□□□□ -0.18
BBS4-204ENST00000562084 BRI3O95415 125 aa13.95□□□□□ -0.18
BBS4-204ENST00000562084 RPL39P62891 51 aaKnown RBP13.95□□□□□ -0.18
BBS4-204ENST00000562084 Q8N1Y9 231 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms