RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 GAGE2AQ6NT46 116 aa14.25□□□□□ -0.13
RAB40C-206ENST00000561781 IGFBPL1Q8WX77 278 aa14.25□□□□□ -0.13
RAB40C-206ENST00000561781 KLK15Q9H2R5 256 aa14.25□□□□□ -0.13
RAB40C-206ENST00000561781 USP9YO00507 2555 aaPredicted RBP14.25□□□□□ -0.13
RAB40C-206ENST00000561781 I3L2K1 104 aa14.24□□□□□ -0.13
RAB40C-206ENST00000561781 Q1RN00 199 aa14.24□□□□□ -0.13
RAB40C-206ENST00000561781 KLK5Q9Y337 293 aaPredicted RBP14.24□□□□□ -0.13
RAB40C-206ENST00000561781 ACYP1P07311 99 aa14.24□□□□□ -0.13
RAB40C-206ENST00000561781 GATA4P43694 442 aa14.24□□□□□ -0.13
RAB40C-206ENST00000561781 ZNF672Q499Z4 452 aaPredicted RBP14.24□□□□□ -0.13
RAB40C-206ENST00000561781 MRAPQ8TCY5 172 aa14.24□□□□□ -0.13
RAB40C-206ENST00000561781 ICE1Q9Y2F5 2266 aa14.24□□□□□ -0.13
RAB40C-206ENST00000561781 TRBV30A0A0K0K1B3 111 aa14.23□□□□□ -0.13
RAB40C-206ENST00000561781 H7C2G1 150 aa14.23□□□□□ -0.13
RAB40C-206ENST00000561781 ZNF491Q8N8L2 437 aa14.23□□□□□ -0.13
RAB40C-206ENST00000561781 CSMD1Q96PZ7 3565 aa14.23□□□□□ -0.13
RAB40C-206ENST00000561781 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.23□□□□□ -0.13
RAB40C-206ENST00000561781 RNF125Q96EQ8 232 aa14.23□□□□□ -0.13
RAB40C-206ENST00000561781 DOPEY2Q9Y3R5 2298 aa14.22□□□□□ -0.13
RAB40C-206ENST00000561781 TRAV26-2A0A0B4J265 109 aa14.22□□□□□ -0.13
RAB40C-206ENST00000561781 TEX22C9J3V5 150 aa14.22□□□□□ -0.13
RAB40C-206ENST00000561781 TRGV3P03979 118 aa14.22□□□□□ -0.13
RAB40C-206ENST00000561781 ELANEP08246 267 aa14.22□□□□□ -0.13
RAB40C-206ENST00000561781 CRYGAP11844 174 aa14.22□□□□□ -0.13
RAB40C-206ENST00000561781 COX7CP15954 63 aa14.22□□□□□ -0.13
RAB40C-206ENST00000561781 LRBAP50851 2863 aa14.22□□□□□ -0.13
RAB40C-206ENST00000561781 CELSR2Q9HCU4 2923 aa14.22□□□□□ -0.13
RAB40C-206ENST00000561781 J3QKU1 62 aa14.22□□□□□ -0.13
RAB40C-206ENST00000561781 CEMP1Q6PRD7 247 aaPredicted RBP14.22□□□□□ -0.13
RAB40C-206ENST00000561781 LINC00527Q9UJ94 153 aa14.22□□□□□ -0.13
RAB40C-206ENST00000561781 TACC2O95359 2948 aa14.22□□□□□ -0.13
RAB40C-206ENST00000561781 TMEM200BQ69YZ2 307 aa14.21□□□□□ -0.13
RAB40C-206ENST00000561781 DUX3Q96PT4 197 aa14.21□□□□□ -0.13
RAB40C-206ENST00000561781 METTL26Q96S19 204 aa14.21□□□□□ -0.14
RAB40C-206ENST00000561781 H7C423 109 aa14.2□□□□□ -0.14
RAB40C-206ENST00000561781 C3orf36Q3SXR2 165 aa14.2□□□□□ -0.14
RAB40C-206ENST00000561781 ITLN2Q8WWU7 325 aaPredicted RBP14.2□□□□□ -0.14
RAB40C-206ENST00000561781 HECTD1Q9ULT8 2610 aa14.2□□□□□ -0.14
RAB40C-206ENST00000561781 C2orf66Q6UXQ4 117 aa14.2□□□□□ -0.14
RAB40C-206ENST00000561781 EIF4EBP3O60516 100 aaPredicted RBP14.19□□□□□ -0.14
RAB40C-206ENST00000561781 FAM27E3Q08E93 113 aa14.19□□□□□ -0.14
RAB40C-206ENST00000561781 ZNF256Q9Y2P7 627 aaPredicted RBP14.19□□□□□ -0.14
RAB40C-206ENST00000561781 IGHV1-46P01743 117 aa14.19□□□□□ -0.14
RAB40C-206ENST00000561781 C11orf86A6NJI1 115 aa14.18□□□□□ -0.14
RAB40C-206ENST00000561781 M0R1B8 84 aa14.18□□□□□ -0.14
RAB40C-206ENST00000561781 CRYGBP07316 175 aa14.18□□□□□ -0.14
RAB40C-206ENST00000561781 C22orf34Q6ZV56 151 aa14.18□□□□□ -0.14
RAB40C-206ENST00000561781 SLC25A15Q9Y619 301 aa14.18□□□□□ -0.14
RAB40C-206ENST00000561781 ANKHD1Q8IWZ3 2542 aaKnown RBP14.18□□□□□ -0.14
RAB40C-206ENST00000561781 LINC00311Q8N616 119 aa14.17□□□□□ -0.14
RAB40C-206ENST00000561781 HRNRQ86YZ3 2850 aaPredicted RBP14.17□□□□□ -0.14
RAB40C-206ENST00000561781 C19orf84I3L1E1 186 aa14.17□□□□□ -0.14
RAB40C-206ENST00000561781 IGFL4Q6B9Z1 124 aa14.17□□□□□ -0.14
RAB40C-206ENST00000561781 LINC00643Q86TS7 51 aa14.17□□□□□ -0.14
RAB40C-206ENST00000561781 KIR2DL5BQ8NHK3 375 aa14.17□□□□□ -0.14
RAB40C-206ENST00000561781 SLC50A1Q9BRV3 221 aa14.17□□□□□ -0.14
RAB40C-206ENST00000561781 K7EIM0 57 aa14.16□□□□□ -0.14
RAB40C-206ENST00000561781 ZNF22P17026 224 aaPredicted RBP14.16□□□□□ -0.14
RAB40C-206ENST00000561781 BEX4Q9NWD9 120 aaPredicted RBP14.16□□□□□ -0.14
RAB40C-206ENST00000561781 PTPN13Q12923 2485 aa14.16□□□□□ -0.14
RAB40C-206ENST00000561781 IGLV3-9A0A075B6K5 115 aa14.16□□□□□ -0.14
RAB40C-206ENST00000561781 C17orf100A8MU93 164 aa14.16□□□□□ -0.14
RAB40C-206ENST00000561781 TRIAP1O43715 76 aa14.16□□□□□ -0.14
RAB40C-206ENST00000561781 SUMO2P61956 95 aaKnown RBP14.16□□□□□ -0.14
RAB40C-206ENST00000561781 IGLV4-69A0A075B6H9 119 aa14.15□□□□□ -0.14
RAB40C-206ENST00000561781 OVOL1O14753 267 aa14.15□□□□□ -0.14
RAB40C-206ENST00000561781 LGALS3P17931 250 aaKnown RBP14.15□□□□□ -0.14
RAB40C-206ENST00000561781 DUX5Q96PT3 197 aa14.15□□□□□ -0.14
RAB40C-206ENST00000561781 TSPEAR-AS2P59090 65 aa14.15□□□□□ -0.14
RAB40C-206ENST00000561781 AMELXQ99217 191 aa14.15□□□□□ -0.14
RAB40C-206ENST00000561781 S4R3C0 116 aa14.15□□□□□ -0.14
RAB40C-206ENST00000561781 PKDREJQ9NTG1 2253 aa14.14□□□□□ -0.15
RAB40C-206ENST00000561781 TRACP01848 142 aa14.14□□□□□ -0.15
RAB40C-206ENST00000561781 COX6CP09669 75 aa14.14□□□□□ -0.15
RAB40C-206ENST00000561781 CXCL5P42830 114 aa14.14□□□□□ -0.15
RAB40C-206ENST00000561781 FBN2P35556 2912 aa14.14□□□□□ -0.15
RAB40C-206ENST00000561781 IGHV4-4A0A075B6R2 117 aa14.14□□□□□ -0.15
RAB40C-206ENST00000561781 J3QQQ9 107 aa14.14□□□□□ -0.15
RAB40C-206ENST00000561781 CRYGDP07320 174 aa14.14□□□□□ -0.15
RAB40C-206ENST00000561781 TMEM258P61165 79 aa14.14□□□□□ -0.15
RAB40C-206ENST00000561781 ROS1P08922 2347 aa14.14□□□□□ -0.15
RAB40C-206ENST00000561781 HIST2H2BCQ6DN03 193 aa14.13□□□□□ -0.15
RAB40C-206ENST00000561781 C8orf31Q8N9H6 132 aa14.13□□□□□ -0.15
RAB40C-206ENST00000561781 CFHR4Q92496 578 aa14.13□□□□□ -0.15
RAB40C-206ENST00000561781 MUSTN1Q8IVN3 82 aa14.13□□□□□ -0.15
RAB40C-206ENST00000561781 C14orf178Q8N769 122 aaPredicted RBP14.13□□□□□ -0.15
RAB40C-206ENST00000561781 DPH3Q96FX2 82 aa14.13□□□□□ -0.15
RAB40C-206ENST00000561781 SPANXN1Q5VSR9 72 aa14.12□□□□□ -0.15
RAB40C-206ENST00000561781 C2orf48Q96LS8 159 aa14.12□□□□□ -0.15
RAB40C-206ENST00000561781 IGKV3D-20A0A0C4DH25 116 aa14.12□□□□□ -0.15
RAB40C-206ENST00000561781 CCL8P80075 99 aa14.11□□□□□ -0.15
RAB40C-206ENST00000561781 LINC01560Q8TB33 94 aa14.11□□□□□ -0.15
RAB40C-206ENST00000561781 TMEM223A0PJW6 202 aa14.11□□□□□ -0.15
RAB40C-206ENST00000561781 VPS13CQ709C8 3753 aa14.11□□□□□ -0.15
RAB40C-206ENST00000561781 ABCA4P78363 2273 aa14.1□□□□□ -0.15
RAB40C-206ENST00000561781 IGHV1-69DA0A0B4J2H0 117 aa14.1□□□□□ -0.15
RAB40C-206ENST00000561781 ICOSQ9Y6W8 199 aa14.1□□□□□ -0.15
RAB40C-206ENST00000561781 PLCE1Q9P212 2302 aa14.1□□□□□ -0.15
RAB40C-206ENST00000561781 IGHV7-4-1A0A0J9YVY3 117 aa14.1□□□□□ -0.15
RAB40C-206ENST00000561781 ATOX1O00244 68 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms