RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 IGHV3-33P01772 117 aa6.9□□□□□ -1.3
CLK3-205ENST00000561673 SEC11BP0C7V7 166 aa6.9□□□□□ -1.3
CLK3-205ENST00000561673 IGHV3-30-3P0DP02 117 aa6.9□□□□□ -1.3
CLK3-205ENST00000561673 IGHV3-30-5P0DP03 117 aa6.9□□□□□ -1.3
CLK3-205ENST00000561673 UBE2G1P62253 170 aa6.9□□□□□ -1.3
CLK3-205ENST00000561673 GAGE1Q13065 139 aa6.9□□□□□ -1.3
CLK3-205ENST00000561673 GAGE4Q13068 117 aa6.9□□□□□ -1.3
CLK3-205ENST00000561673 GAGE5Q13069 117 aa6.9□□□□□ -1.3
CLK3-205ENST00000561673 GAGE13Q4V321 117 aa6.9□□□□□ -1.3
CLK3-205ENST00000561673 C14orf178Q8N769 122 aaPredicted RBP6.9□□□□□ -1.3
CLK3-205ENST00000561673 SFT2D1Q8WV19 159 aa6.9□□□□□ -1.3
CLK3-205ENST00000561673 MBD3L1Q8WWY6 194 aa6.9□□□□□ -1.3
CLK3-205ENST00000561673 AP5S1Q9NUS5 200 aa6.9□□□□□ -1.3
CLK3-205ENST00000561673 VPS13BQ7Z7G8 4022 aa6.9□□□□□ -1.31
CLK3-205ENST00000561673 TMSB15BA0A087X1C1 80 aa6.89□□□□□ -1.31
CLK3-205ENST00000561673 A0A1B0GV50 99 aa6.89□□□□□ -1.31
CLK3-205ENST00000561673 LRCOL1A6NCL2 159 aa6.89□□□□□ -1.31
CLK3-205ENST00000561673 LINC00694P0DN24 101 aa6.89□□□□□ -1.31
CLK3-205ENST00000561673 XGP55808 180 aa6.89□□□□□ -1.31
CLK3-205ENST00000561673 KRTAP10-1P60331 282 aa6.89□□□□□ -1.31
CLK3-205ENST00000561673 FAM213BQ8TBF2 198 aa6.89□□□□□ -1.31
CLK3-205ENST00000561673 Q9HAA7 133 aa6.89□□□□□ -1.31
CLK3-205ENST00000561673 A0A0D9SG52 128 aa6.88□□□□□ -1.31
CLK3-205ENST00000561673 UMAD1C9J7I0 102 aa6.88□□□□□ -1.31
CLK3-205ENST00000561673 BCL2L11O43521 198 aa6.88□□□□□ -1.31
CLK3-205ENST00000561673 PSCAO43653 123 aa6.88□□□□□ -1.31
CLK3-205ENST00000561673 AKR1C3P42330 323 aa6.88□□□□□ -1.31
CLK3-205ENST00000561673 Q8N3U1 123 aa6.88□□□□□ -1.31
CLK3-205ENST00000561673 SYT8Q8NBV8 401 aa6.88□□□□□ -1.31
CLK3-205ENST00000561673 ZNF471Q9BX82 626 aaPredicted RBP6.88□□□□□ -1.31
CLK3-205ENST00000561673 PHLDA3Q9Y5J5 127 aa6.88□□□□□ -1.31
CLK3-205ENST00000561673 A0A087WWL8 130 aa6.87□□□□□ -1.31
CLK3-205ENST00000561673 SCO2A0A1W2PP80 73 aa6.87□□□□□ -1.31
CLK3-205ENST00000561673 KANTRA0A1W2PQU2 76 aa6.87□□□□□ -1.31
CLK3-205ENST00000561673 H3BS24 57 aa6.87□□□□□ -1.31
CLK3-205ENST00000561673 M0R381 172 aa6.87□□□□□ -1.31
CLK3-205ENST00000561673 RHODO00212 210 aa6.87□□□□□ -1.31
CLK3-205ENST00000561673 GCSHP23434 173 aa6.87□□□□□ -1.31
CLK3-205ENST00000561673 FAM74A4Q5TZK3 123 aa6.87□□□□□ -1.31
CLK3-205ENST00000561673 SFRP2Q96HF1 295 aa6.87□□□□□ -1.31
CLK3-205ENST00000561673 S100A9P06702 114 aaKnown RBP6.86□□□□□ -1.31
CLK3-205ENST00000561673 H2AFB1P0C5Y9 115 aa6.86□□□□□ -1.31
CLK3-205ENST00000561673 TPT1P13693 172 aaKnown RBP6.86□□□□□ -1.31
CLK3-205ENST00000561673 LAGE3Q14657 143 aa6.86□□□□□ -1.31
CLK3-205ENST00000561673 TMUB2Q71RG4 321 aa6.86□□□□□ -1.31
CLK3-205ENST00000561673 BAGE2Q86Y30 109 aa6.86□□□□□ -1.31
CLK3-205ENST00000561673 MLST8Q9BVC4 326 aa6.86□□□□□ -1.31
CLK3-205ENST00000561673 A0A087WWC5 75 aa6.85□□□□□ -1.31
CLK3-205ENST00000561673 IGLV5-52A0A0A0MRZ9 124 aa6.85□□□□□ -1.31
CLK3-205ENST00000561673 CCL20P78556 96 aa6.85□□□□□ -1.31
CLK3-205ENST00000561673 RPL19P84098 196 aaKnown RBP6.85□□□□□ -1.31
CLK3-205ENST00000561673 DAZ4Q86SG3 579 aaKnown RBP6.85□□□□□ -1.31
CLK3-205ENST00000561673 ZFP82Q8N141 532 aa6.85□□□□□ -1.31
CLK3-205ENST00000561673 Q8N814 137 aa6.85□□□□□ -1.31
CLK3-205ENST00000561673 DAZ3Q9NR90 486 aaKnown RBP6.85□□□□□ -1.31
CLK3-205ENST00000561673 HERC1Q15751 4861 aa6.84□□□□□ -1.31
CLK3-205ENST00000561673 EPM2AB3EWF7 344 aa6.84□□□□□ -1.31
CLK3-205ENST00000561673 PFDN1O60925 122 aa6.84□□□□□ -1.31
CLK3-205ENST00000561673 EIF5AP63241 154 aaKnown RBP6.84□□□□□ -1.31
CLK3-205ENST00000561673 NTN5Q8WTR8 489 aaPredicted RBP6.84□□□□□ -1.31
CLK3-205ENST00000561673 TM2D2Q9BX73 214 aa6.84□□□□□ -1.31
CLK3-205ENST00000561673 CDIP1Q9H305 208 aa6.84□□□□□ -1.31
CLK3-205ENST00000561673 SRRM2Q9UQ35 2752 aaKnown RBP6.83□□□□□ -1.32
CLK3-205ENST00000561673 TRAV8-3A0A0A6YYJ7 113 aa6.83□□□□□ -1.32
CLK3-205ENST00000561673 TRBV10-1A0A0K0K1A3 114 aa6.83□□□□□ -1.32
CLK3-205ENST00000561673 OR10AG1Q8NH19 301 aa6.83□□□□□ -1.32
CLK3-205ENST00000561673 TRBV7-3A0A075B6L6 115 aa6.82□□□□□ -1.32
CLK3-205ENST00000561673 MUC21A0A0G2JKD1 596 aa6.82□□□□□ -1.32
CLK3-205ENST00000561673 MUC21A0A140T8X8 626 aa6.82□□□□□ -1.32
CLK3-205ENST00000561673 CXCL1P09341 107 aa6.82□□□□□ -1.32
CLK3-205ENST00000561673 RPL35P42766 123 aaKnown RBP6.82□□□□□ -1.32
CLK3-205ENST00000561673 RAB4BP61018 213 aa6.82□□□□□ -1.32
CLK3-205ENST00000561673 UBE2D3P61077 147 aa6.82□□□□□ -1.32
CLK3-205ENST00000561673 UBE2D2P62837 147 aa6.82□□□□□ -1.32
CLK3-205ENST00000561673 RPL36AP83881 106 aaKnown RBP6.82□□□□□ -1.32
CLK3-205ENST00000561673 WFDC2Q14508 124 aa6.82□□□□□ -1.32
CLK3-205ENST00000561673 PRR27Q6MZM9 219 aa6.82□□□□□ -1.32
CLK3-205ENST00000561673 NIT1Q86X76 327 aa6.82□□□□□ -1.32
CLK3-205ENST00000561673 CLRN3Q8NCR9 226 aa6.82□□□□□ -1.32
CLK3-205ENST00000561673 RPL36ALQ969Q0 106 aaKnown RBP6.82□□□□□ -1.32
CLK3-205ENST00000561673 DNAJC30Q96LL9 226 aa6.82□□□□□ -1.32
CLK3-205ENST00000561673 DERL1Q9BUN8 251 aa6.82□□□□□ -1.32
CLK3-205ENST00000561673 GNG13Q9P2W3 67 aa6.82□□□□□ -1.32
CLK3-205ENST00000561673 MYCBP2O75592 4640 aa6.81□□□□□ -1.32
CLK3-205ENST00000561673 TRAV1-1A0A0B4J248 108 aa6.81□□□□□ -1.32
CLK3-205ENST00000561673 LECT2O14960 151 aa6.81□□□□□ -1.32
CLK3-205ENST00000561673 SNAI2O43623 268 aa6.81□□□□□ -1.32
CLK3-205ENST00000561673 SMR3BP02814 79 aaPredicted RBP6.81□□□□□ -1.32
CLK3-205ENST00000561673 OR5AL1P0C617 328 aa6.81□□□□□ -1.32
CLK3-205ENST00000561673 RAB5CP51148 216 aa6.81□□□□□ -1.32
CLK3-205ENST00000561673 SSTP61278 116 aa6.81□□□□□ -1.32
CLK3-205ENST00000561673 HAMPP81172 84 aa6.81□□□□□ -1.32
CLK3-205ENST00000561673 TOR2AQ5JU69 321 aa6.81□□□□□ -1.32
CLK3-205ENST00000561673 OR10G8Q8NGN5 311 aa6.81□□□□□ -1.32
CLK3-205ENST00000561673 MANBALQ9NQG1 85 aa6.81□□□□□ -1.32
CLK3-205ENST00000561673 URGCP-MRPS24S4R325 110 aa6.81□□□□□ -1.32
CLK3-205ENST00000561673 ZNF56Q15929 161 aa6.8□□□□□ -1.32
CLK3-205ENST00000561673 Q5VSD8 79 aa6.8□□□□□ -1.32
CLK3-205ENST00000561673 SPANXN1Q5VSR9 72 aa6.8□□□□□ -1.32
CLK3-205ENST00000561673 NEXN-AS1Q8NBZ9 246 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms