RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 M0R381 172 aa8.32□□□□□ -1.08
NEIL1-202ENST00000561643 ATP5LO75964 103 aa8.32□□□□□ -1.08
NEIL1-202ENST00000561643 S100A4P26447 101 aaKnown RBP8.32□□□□□ -1.08
NEIL1-202ENST00000561643 CARD19Q96LW7 228 aa8.32□□□□□ -1.08
NEIL1-202ENST00000561643 LINC00477Q96M19 166 aa8.32□□□□□ -1.08
NEIL1-202ENST00000561643 MRPL35Q9NZE8 188 aaKnown RBP8.32□□□□□ -1.08
NEIL1-202ENST00000561643 LENEPQ9Y5L5 61 aa8.32□□□□□ -1.08
NEIL1-202ENST00000561643 POLQO75417 2590 aa8.32□□□□□ -1.08
NEIL1-202ENST00000561643 CCL19Q99731 98 aa8.32□□□□□ -1.08
NEIL1-202ENST00000561643 IGHV4-4A0A075B6R2 117 aa8.31□□□□□ -1.08
NEIL1-202ENST00000561643 LOC107984640A0A0U1RRK4 108 aa8.31□□□□□ -1.08
NEIL1-202ENST00000561643 A4D1N5 150 aa8.31□□□□□ -1.08
NEIL1-202ENST00000561643 SRSF1Q07955 248 aaKnown RBP eCLIP8.31□□□□□ -1.08
NEIL1-202ENST00000561643 GPHB5Q86YW7 130 aa8.31□□□□□ -1.08
NEIL1-202ENST00000561643 TRAV21A0A0B4J279 112 aa8.31□□□□□ -1.08
NEIL1-202ENST00000561643 OVOL1O14753 267 aa8.31□□□□□ -1.08
NEIL1-202ENST00000561643 SPRY2O43597 315 aa8.31□□□□□ -1.08
NEIL1-202ENST00000561643 ZFP2Q6ZN57 461 aa8.31□□□□□ -1.08
NEIL1-202ENST00000561643 USMG5Q96IX5 58 aa8.31□□□□□ -1.08
NEIL1-202ENST00000561643 KLK15Q9H2R5 256 aa8.31□□□□□ -1.08
NEIL1-202ENST00000561643 PSMG4Q5JS54 123 aa8.3□□□□□ -1.08
NEIL1-202ENST00000561643 ZFAND2AQ8N6M9 145 aa8.3□□□□□ -1.08
NEIL1-202ENST00000561643 DLX4Q92988 240 aaPredicted RBP8.3□□□□□ -1.08
NEIL1-202ENST00000561643 MAP1AP78559 2803 aaPredicted RBP8.3□□□□□ -1.08
NEIL1-202ENST00000561643 HOXA3O43365 443 aaPredicted RBP8.3□□□□□ -1.08
NEIL1-202ENST00000561643 BLCAPP62952 87 aa8.3□□□□□ -1.08
NEIL1-202ENST00000561643 TRBV7-3A0A075B6L6 115 aa8.3□□□□□ -1.08
NEIL1-202ENST00000561643 IGHG2P01859 326 aa8.3□□□□□ -1.08
NEIL1-202ENST00000561643 ASIPP42127 132 aa8.3□□□□□ -1.08
NEIL1-202ENST00000561643 ATP6V0E2Q8NHE4 81 aa8.3□□□□□ -1.08
NEIL1-202ENST00000561643 C10orf105Q8TEF2 133 aa8.3□□□□□ -1.08
NEIL1-202ENST00000561643 PHLDA3Q9Y5J5 127 aa8.3□□□□□ -1.08
NEIL1-202ENST00000561643 A0A087WX48 190 aa8.29□□□□□ -1.08
NEIL1-202ENST00000561643 LINC01549A6NIU2 74 aa8.29□□□□□ -1.08
NEIL1-202ENST00000561643 F6UB75 175 aa8.29□□□□□ -1.08
NEIL1-202ENST00000561643 RNASE4P34096 147 aaKnown RBP8.29□□□□□ -1.08
NEIL1-202ENST00000561643 MEIG1Q5JSS6 88 aa8.29□□□□□ -1.08
NEIL1-202ENST00000561643 SOCS3O14543 225 aa8.29□□□□□ -1.08
NEIL1-202ENST00000561643 TAL2Q16559 108 aa8.29□□□□□ -1.08
NEIL1-202ENST00000561643 TTC32Q5I0X7 151 aa8.29□□□□□ -1.08
NEIL1-202ENST00000561643 SMIM2Q9BVW6 85 aa8.29□□□□□ -1.08
NEIL1-202ENST00000561643 H3BUA1 57 aa8.28□□□□□ -1.08
NEIL1-202ENST00000561643 C14orf178Q8N769 122 aaPredicted RBP8.28□□□□□ -1.08
NEIL1-202ENST00000561643 PPDPFLQ8WWR9 84 aa8.28□□□□□ -1.08
NEIL1-202ENST00000561643 RHPN1-AS1Q9BWJ2 59 aa8.28□□□□□ -1.08
NEIL1-202ENST00000561643 ZFHX3Q15911 3703 aa8.28□□□□□ -1.08
NEIL1-202ENST00000561643 A6NDX4 124 aa8.28□□□□□ -1.08
NEIL1-202ENST00000561643 Q6ZS46 218 aa8.28□□□□□ -1.08
NEIL1-202ENST00000561643 IGHV4-30-2A0A087WSY4 118 aa8.28□□□□□ -1.08
NEIL1-202ENST00000561643 TRAV4A0A0B4J268 109 aa8.28□□□□□ -1.08
NEIL1-202ENST00000561643 MGPP08493 103 aa8.28□□□□□ -1.08
NEIL1-202ENST00000561643 CELSR1Q9NYQ6 3014 aa8.28□□□□□ -1.08
NEIL1-202ENST00000561643 ABCA12Q86UK0 2595 aa8.27□□□□□ -1.08
NEIL1-202ENST00000561643 CRLF1O75462 422 aa8.27□□□□□ -1.09
NEIL1-202ENST00000561643 SRD5A1P18405 259 aa8.27□□□□□ -1.09
NEIL1-202ENST00000561643 NDUFV3P56181 108 aaKnown RBP8.27□□□□□ -1.09
NEIL1-202ENST00000561643 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.27□□□□□ -1.092e-6■■□□□ 13.3
NEIL1-202ENST00000561643 DPH3P1Q9H4G8 78 aa8.27□□□□□ -1.09
NEIL1-202ENST00000561643 SUMO2P61956 95 aaKnown RBP8.27□□□□□ -1.09
NEIL1-202ENST00000561643 CCDC168Q8NDH2 2452 aa8.27□□□□□ -1.09
NEIL1-202ENST00000561643 MSMBP08118 114 aa8.27□□□□□ -1.09
NEIL1-202ENST00000561643 HLA-DRB4P13762 266 aa8.27□□□□□ -1.09
NEIL1-202ENST00000561643 GAGE2BQ13066 116 aa8.27□□□□□ -1.09
NEIL1-202ENST00000561643 GAGE2EQ4V326 116 aa8.27□□□□□ -1.09
NEIL1-202ENST00000561643 TEN1Q86WV5 123 aa8.27□□□□□ -1.09
NEIL1-202ENST00000561643 RPL39LQ96EH5 51 aaKnown RBP8.27□□□□□ -1.09
NEIL1-202ENST00000561643 GAGE2DQ9UEU5 116 aa8.27□□□□□ -1.09
NEIL1-202ENST00000561643 CSDC2Q9Y534 153 aaKnown RBP8.27□□□□□ -1.09
NEIL1-202ENST00000561643 HLA-DRB4X5D2U9 266 aa8.27□□□□□ -1.09
NEIL1-202ENST00000561643 UTP20O75691 2785 aaKnown RBP8.26□□□□□ -1.09
NEIL1-202ENST00000561643 GNRH2O43555 120 aa8.26□□□□□ -1.09
NEIL1-202ENST00000561643 ORMDL2Q53FV1 153 aa8.26□□□□□ -1.09
NEIL1-202ENST00000561643 RASL10AQ92737 203 aa8.26□□□□□ -1.09
NEIL1-202ENST00000561643 DAZ1Q9NQZ3 744 aaKnown RBP8.26□□□□□ -1.09
NEIL1-202ENST00000561643 ZNF688P0C7X2 276 aa8.26□□□□□ -1.09
NEIL1-202ENST00000561643 SCGB3A1Q96QR1 104 aa8.25□□□□□ -1.09
NEIL1-202ENST00000561643 PLNP26678 52 aa8.25□□□□□ -1.09
NEIL1-202ENST00000561643 ANKRD29Q8N6D5 301 aa8.25□□□□□ -1.09
NEIL1-202ENST00000561643 SPXQ9BT56 116 aa8.25□□□□□ -1.09
NEIL1-202ENST00000561643 VPS13CQ709C8 3753 aa8.24□□□□□ -1.09
NEIL1-202ENST00000561643 MYMXA0A1B0GTQ4 84 aa8.24□□□□□ -1.09
NEIL1-202ENST00000561643 IGLV1-40P01703 118 aa8.24□□□□□ -1.09
NEIL1-202ENST00000561643 FAM19A4Q96LR4 140 aa8.24□□□□□ -1.09
NEIL1-202ENST00000561643 H7C1H1 209 aa8.24□□□□□ -1.09
NEIL1-202ENST00000561643 TCL1BO95988 128 aa8.24□□□□□ -1.09
NEIL1-202ENST00000561643 MED14OSP0DP75 135 aa8.24□□□□□ -1.09
NEIL1-202ENST00000561643 EDN2P20800 178 aa8.24□□□□□ -1.09
NEIL1-202ENST00000561643 RAX2Q96IS3 184 aa8.24□□□□□ -1.09
NEIL1-202ENST00000561643 VCX2Q9H322 139 aa8.24□□□□□ -1.09
NEIL1-202ENST00000561643 F8VRH5 84 aa8.23□□□□□ -1.09
NEIL1-202ENST00000561643 LGALS1P09382 135 aaKnown RBP8.23□□□□□ -1.09
NEIL1-202ENST00000561643 RNASE3P12724 160 aaKnown RBP8.23□□□□□ -1.09
NEIL1-202ENST00000561643 CSPG4Q6UVK1 2322 aa8.23□□□□□ -1.09
NEIL1-202ENST00000561643 A8MWV9 139 aa8.23□□□□□ -1.09
NEIL1-202ENST00000561643 TOMM6Q96B49 74 aa8.23□□□□□ -1.09
NEIL1-202ENST00000561643 SNCGO76070 127 aa8.23□□□□□ -1.09
NEIL1-202ENST00000561643 AVPP01185 164 aa8.23□□□□□ -1.09
NEIL1-202ENST00000561643 LINC00694P0DN24 101 aa8.23□□□□□ -1.09
NEIL1-202ENST00000561643 SLC25A16P16260 332 aa8.23□□□□□ -1.09
NEIL1-202ENST00000561643 SCGB1D4Q6XE38 83 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms