RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 TOMM6Q96B49 74 aa7.92□□□□□ -1.14
GTF3C1-202ENST00000561623 SPATA25Q9BR10 227 aa7.92□□□□□ -1.14
GTF3C1-202ENST00000561623 NOP10Q9NPE3 64 aaKnown RBP7.92□□□□□ -1.14
GTF3C1-202ENST00000561623 TRAV4A0A0B4J268 109 aa7.92□□□□□ -1.14
GTF3C1-202ENST00000561623 FAM215AQ9Y5M1 114 aa7.92□□□□□ -1.14
GTF3C1-202ENST00000561623 C11orf86A6NJI1 115 aa7.91□□□□□ -1.14
GTF3C1-202ENST00000561623 E9PLD3 99 aa7.91□□□□□ -1.14
GTF3C1-202ENST00000561623 Q6ZSR3 168 aa7.91□□□□□ -1.14
GTF3C1-202ENST00000561623 ZNF843Q8N446 348 aa7.91□□□□□ -1.14
GTF3C1-202ENST00000561623 LGALS9O00182 355 aa7.91□□□□□ -1.14
GTF3C1-202ENST00000561623 SPTSSBQ8NFR3 76 aa7.91□□□□□ -1.14
GTF3C1-202ENST00000561623 CCDC168Q8NDH2 2452 aa7.91□□□□□ -1.14
GTF3C1-202ENST00000561623 SHANK1Q9Y566 2161 aa7.91□□□□□ -1.14
GTF3C1-202ENST00000561623 TCL1BO95988 128 aa7.91□□□□□ -1.14
GTF3C1-202ENST00000561623 TRBV10-2A0A0K0K1G8 114 aa7.91□□□□□ -1.14
GTF3C1-202ENST00000561623 SPANXCQ9NY87 97 aa7.91□□□□□ -1.14
GTF3C1-202ENST00000561623 A0A0J9YY99 117 aa7.91□□□□□ -1.14
GTF3C1-202ENST00000561623 Q6ZQT7 251 aa7.91□□□□□ -1.14
GTF3C1-202ENST00000561623 SND1-IT1Q9HBX3 110 aa7.91□□□□□ -1.14
GTF3C1-202ENST00000561623 Q6ZUT4 128 aa7.91□□□□□ -1.14
GTF3C1-202ENST00000561623 ZNF503Q96F45 646 aa7.91□□□□□ -1.14
GTF3C1-202ENST00000561623 HIVEP2P31629 2446 aa7.9□□□□□ -1.14
GTF3C1-202ENST00000561623 DEFB1P60022 68 aa7.9□□□□□ -1.14
GTF3C1-202ENST00000561623 COX7B2Q8TF08 81 aa7.9□□□□□ -1.14
GTF3C1-202ENST00000561623 KAAG1Q9UBP8 84 aa7.9□□□□□ -1.14
GTF3C1-202ENST00000561623 ATP6V0E2Q8NHE4 81 aa7.9□□□□□ -1.14
GTF3C1-202ENST00000561623 CTSGP08311 255 aa7.9□□□□□ -1.15
GTF3C1-202ENST00000561623 LINC00322Q6ZN03 302 aaPredicted RBP7.9□□□□□ -1.15
GTF3C1-202ENST00000561623 DENND4CQ5VZ89 1909 aa7.9□□□□□ -1.15
GTF3C1-202ENST00000561623 CCL24O00175 119 aa7.9□□□□□ -1.15
GTF3C1-202ENST00000561623 PSMB8P28062 276 aa7.9□□□□□ -1.15
GTF3C1-202ENST00000561623 SEC61GP60059 68 aa7.9□□□□□ -1.15
GTF3C1-202ENST00000561623 RBX1P62877 108 aa7.9□□□□□ -1.15
GTF3C1-202ENST00000561623 HERV-K104P63124 156 aa7.9□□□□□ -1.15
GTF3C1-202ENST00000561623 KIAA1671Q9BY89 1806 aa7.89□□□□□ -1.15
GTF3C1-202ENST00000561623 CRYGBP07316 175 aa7.89□□□□□ -1.15
GTF3C1-202ENST00000561623 OPRPNQ99935 248 aaPredicted RBP7.89□□□□□ -1.15
GTF3C1-202ENST00000561623 C19orf71A6NCJ1 209 aa7.89□□□□□ -1.15
GTF3C1-202ENST00000561623 IGLV11-55A0A075B6I3 123 aa7.89□□□□□ -1.15
GTF3C1-202ENST00000561623 NDUFA11Q86Y39 141 aa7.89□□□□□ -1.15
GTF3C1-202ENST00000561623 APRG1Q8IVJ8 170 aa7.89□□□□□ -1.15
GTF3C1-202ENST00000561623 LENEPQ9Y5L5 61 aa7.89□□□□□ -1.15
GTF3C1-202ENST00000561623 IGLV2-8P01709 118 aa7.89□□□□□ -1.15
GTF3C1-202ENST00000561623 ANAPC1Q9H1A4 1944 aa7.89□□□□□ -1.15
GTF3C1-202ENST00000561623 DYSFO75923 2080 aa7.88□□□□□ -1.15
GTF3C1-202ENST00000561623 YPEL4Q96NS1 127 aa7.88□□□□□ -1.15
GTF3C1-202ENST00000561623 CTRLP40313 264 aa7.88□□□□□ -1.15
GTF3C1-202ENST00000561623 DEFB136Q30KP8 78 aa7.88□□□□□ -1.15
GTF3C1-202ENST00000561623 IGHV7-81A0A0B4J1V7 117 aa7.88□□□□□ -1.15
GTF3C1-202ENST00000561623 A0A1B0GXF2 115 aa7.88□□□□□ -1.15
GTF3C1-202ENST00000561623 TP53TG3Q9ULZ0 132 aa7.88□□□□□ -1.15
GTF3C1-202ENST00000561623 GPHB5Q86YW7 130 aa7.88□□□□□ -1.15
GTF3C1-202ENST00000561623 NACAE9PAV3 2078 aa7.88□□□□□ -1.15
GTF3C1-202ENST00000561623 TMEM61Q8N0U2 210 aa7.88□□□□□ -1.15
GTF3C1-202ENST00000561623 SPANXB1Q9NS25 103 aaPredicted RBP7.88□□□□□ -1.15
GTF3C1-202ENST00000561623 WI2-2373I1.2A0A1W2PRP0 233 aa7.87□□□□□ -1.15
GTF3C1-202ENST00000561623 BUB3O43684 328 aa7.87□□□□□ -1.15
GTF3C1-202ENST00000561623 PLA2G2AP14555 144 aa7.87□□□□□ -1.15
GTF3C1-202ENST00000561623 ZNF295-AS1Q8N0V1 137 aa7.87□□□□□ -1.15
GTF3C1-202ENST00000561623 PLXNB3Q9ULL4 1909 aa7.87□□□□□ -1.15
GTF3C1-202ENST00000561623 LECT2O14960 151 aa7.87□□□□□ -1.15
GTF3C1-202ENST00000561623 NDUFV3P56181 108 aaKnown RBP7.87□□□□□ -1.15
GTF3C1-202ENST00000561623 FANCD2OSQ96PS1 177 aa7.87□□□□□ -1.15
GTF3C1-202ENST00000561623 IGLV10-54A0A075B6I4 117 aa7.87□□□□□ -1.15
GTF3C1-202ENST00000561623 TEX22C9J3V5 150 aa7.87□□□□□ -1.15
GTF3C1-202ENST00000561623 COL4A3Q01955 1670 aa7.87□□□□□ -1.15
GTF3C1-202ENST00000561623 DEFB112Q30KQ8 113 aa7.86□□□□□ -1.15
GTF3C1-202ENST00000561623 Q6ZPA2 131 aa7.86□□□□□ -1.15
GTF3C1-202ENST00000561623 MPLKIPQ8TAP9 179 aa7.86□□□□□ -1.15
GTF3C1-202ENST00000561623 GPR179Q6PRD1 2367 aa7.86□□□□□ -1.15
GTF3C1-202ENST00000561623 NPBQ8NG41 125 aa7.86□□□□□ -1.15
GTF3C1-202ENST00000561623 KIF26AQ9ULI4 1882 aaPredicted RBP7.86□□□□□ -1.15
GTF3C1-202ENST00000561623 TNRC6AQ8NDV7 1962 aaKnown RBP7.86□□□□□ -1.15
GTF3C1-202ENST00000561623 OBSL1O75147 1896 aa7.86□□□□□ -1.15
GTF3C1-202ENST00000561623 H0YGX0 51 aa7.86□□□□□ -1.15
GTF3C1-202ENST00000561623 M0R2N4 97 aa7.86□□□□□ -1.15
GTF3C1-202ENST00000561623 Q8N1Y9 231 aa7.86□□□□□ -1.15
GTF3C1-202ENST00000561623 TEX49A0A1B0GTD5 131 aa7.86□□□□□ -1.15
GTF3C1-202ENST00000561623 NCR3O14931 201 aa7.86□□□□□ -1.15
GTF3C1-202ENST00000561623 NDUFC2O95298 119 aa7.86□□□□□ -1.15
GTF3C1-202ENST00000561623 GRNP28799 593 aaKnown RBP7.86□□□□□ -1.15
GTF3C1-202ENST00000561623 PLA2G2CQ5R387 149 aa7.85□□□□□ -1.15
GTF3C1-202ENST00000561623 BRK1Q8WUW1 75 aa7.85□□□□□ -1.15
GTF3C1-202ENST00000561623 IGHV4-30-2A0A087WSY4 118 aa7.85□□□□□ -1.15
GTF3C1-202ENST00000561623 SHISA2Q6UWI4 295 aa7.85□□□□□ -1.15
GTF3C1-202ENST00000561623 C16orf54Q6UWD8 224 aa7.85□□□□□ -1.15
GTF3C1-202ENST00000561623 RNF138Q8WVD3 245 aa7.85□□□□□ -1.15
GTF3C1-202ENST00000561623 AJUBAQ96IF1 538 aa7.85□□□□□ -1.15
GTF3C1-202ENST00000561623 H3BT86 120 aa7.85□□□□□ -1.15
GTF3C1-202ENST00000561623 IGHV4-59P01825 116 aa7.85□□□□□ -1.15
GTF3C1-202ENST00000561623 NFE4Q86UQ8 179 aa7.85□□□□□ -1.15
GTF3C1-202ENST00000561623 NAV3Q8IVL0 2385 aa7.85□□□□□ -1.15
GTF3C1-202ENST00000561623 DOPEY1Q5JWR5 2465 aa7.84□□□□□ -1.15
GTF3C1-202ENST00000561623 ZNF80P51504 273 aaPredicted RBP7.84□□□□□ -1.15
GTF3C1-202ENST00000561623 CEMP1Q6PRD7 247 aaPredicted RBP7.84□□□□□ -1.15
GTF3C1-202ENST00000561623 TNRC6BQ9UPQ9 1833 aaKnown RBP7.84□□□□□ -1.15
GTF3C1-202ENST00000561623 CENPVL3A0A0U1RRI6 287 aa7.84□□□□□ -1.15
GTF3C1-202ENST00000561623 ADAMTS9Q9P2N4 1935 aa7.84□□□□□ -1.15
GTF3C1-202ENST00000561623 IGKV1D-37A0A075B6S9 117 aa7.84□□□□□ -1.15
GTF3C1-202ENST00000561623 K7EQD1 137 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms