RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 CEBPGP53567 150 aa14□□□□□ -0.17
TPM1-232ENST00000561425 LINC00862A6NCI5 91 aa13.99□□□□□ -0.17
TPM1-232ENST00000561425 SRP19P09132 144 aaKnown RBP13.99□□□□□ -0.17
TPM1-232ENST00000561425 COMMD7Q86VX2 200 aa13.99□□□□□ -0.17
TPM1-232ENST00000561425 NHLRC2Q8NBF2 726 aa13.99□□□□□ -0.17
TPM1-232ENST00000561425 SYT8Q8NBV8 401 aa13.99□□□□□ -0.17
TPM1-232ENST00000561425 SFRP2Q96HF1 295 aa13.99□□□□□ -0.17
TPM1-232ENST00000561425 TNFRSF18Q9Y5U5 241 aa13.99□□□□□ -0.17
TPM1-232ENST00000561425 CRYGDP07320 174 aa13.98□□□□□ -0.17
TPM1-232ENST00000561425 RPL35P42766 123 aaKnown RBP13.98□□□□□ -0.17
TPM1-232ENST00000561425 SRSF3P84103 164 aaKnown RBP13.98□□□□□ -0.17
TPM1-232ENST00000561425 EVI2AP22794 236 aa13.97□□□□□ -0.17
TPM1-232ENST00000561425 NFE4Q86UQ8 179 aa13.97□□□□□ -0.17
TPM1-232ENST00000561425 DERL1Q9BUN8 251 aa13.97□□□□□ -0.17
TPM1-232ENST00000561425 SSBP4Q9BWG4 385 aaPredicted RBP13.97□□□□□ -0.17
TPM1-232ENST00000561425 GTSF1LQ9H1H1 148 aa13.97□□□□□ -0.17
TPM1-232ENST00000561425 Q9UF83 564 aa13.97□□□□□ -0.17
TPM1-232ENST00000561425 PHLDA3Q9Y5J5 127 aa13.97□□□□□ -0.17
TPM1-232ENST00000561425 TMSB15BA0A087X1C1 80 aa13.96□□□□□ -0.17
TPM1-232ENST00000561425 RHODO00212 210 aa13.96□□□□□ -0.17
TPM1-232ENST00000561425 LINC01556Q5JQF7 62 aa13.96□□□□□ -0.17
TPM1-232ENST00000561425 LELP1Q5T871 98 aa13.96□□□□□ -0.17
TPM1-232ENST00000561425 UQCC3Q6UW78 93 aa13.96□□□□□ -0.17
TPM1-232ENST00000561425 ATP6V0E2Q8NHE4 81 aa13.96□□□□□ -0.17
TPM1-232ENST00000561425 IGHV3-38A0A0C4DH36 116 aa13.95□□□□□ -0.18
TPM1-232ENST00000561425 C16orf90A8MZG2 172 aa13.95□□□□□ -0.18
TPM1-232ENST00000561425 SPATA12Q7Z6I5 190 aa13.95□□□□□ -0.18
TPM1-232ENST00000561425 C14orf178Q8N769 122 aaPredicted RBP13.95□□□□□ -0.18
TPM1-232ENST00000561425 MSRB1Q9NZV6 116 aa13.95□□□□□ -0.18
TPM1-232ENST00000561425 C9JQL5 133 aa13.94□□□□□ -0.18
TPM1-232ENST00000561425 SNAI2O43623 268 aa13.94□□□□□ -0.18
TPM1-232ENST00000561425 IGLV2-8P01709 118 aa13.94□□□□□ -0.18
TPM1-232ENST00000561425 KRTAP10-2P60368 255 aa13.94□□□□□ -0.18
TPM1-232ENST00000561425 CENPWQ5EE01 88 aa13.94□□□□□ -0.18
TPM1-232ENST00000561425 ZFP82Q8N141 532 aa13.94□□□□□ -0.18
TPM1-232ENST00000561425 C10orf126Q8N4M7 172 aa13.94□□□□□ -0.18
TPM1-232ENST00000561425 LRP1BQ9NZR2 4599 aa13.94□□□□□ -0.18
TPM1-232ENST00000561425 TRAV8-6A0A0B4J262 113 aa13.93□□□□□ -0.18
TPM1-232ENST00000561425 GNG4P50150 75 aa13.93□□□□□ -0.18
TPM1-232ENST00000561425 RPL19P84098 196 aaKnown RBP13.93□□□□□ -0.18
TPM1-232ENST00000561425 SMIM7Q9BQ49 75 aa13.93□□□□□ -0.18
TPM1-232ENST00000561425 ZNF727A8MUV8 499 aa13.92□□□□□ -0.18
TPM1-232ENST00000561425 OR5AL1P0C617 328 aa13.92□□□□□ -0.18
TPM1-232ENST00000561425 SMIM12Q96EX1 92 aa13.92□□□□□ -0.18
TPM1-232ENST00000561425 GAGE12JA6NER3 117 aa13.91□□□□□ -0.18
TPM1-232ENST00000561425 IBA57-AS1B1ANH7 110 aa13.91□□□□□ -0.18
TPM1-232ENST00000561425 M0R381 172 aa13.91□□□□□ -0.18
TPM1-232ENST00000561425 GAGE1Q13065 139 aa13.91□□□□□ -0.18
TPM1-232ENST00000561425 GAGE4Q13068 117 aa13.91□□□□□ -0.18
TPM1-232ENST00000561425 GAGE5Q13069 117 aa13.91□□□□□ -0.18
TPM1-232ENST00000561425 GAGE13Q4V321 117 aa13.91□□□□□ -0.18
TPM1-232ENST00000561425 FAM74A3Q4VXF1 159 aa13.91□□□□□ -0.18
TPM1-232ENST00000561425 A0A087WWL8 130 aa13.9□□□□□ -0.18
TPM1-232ENST00000561425 OR10J3Q5JRS4 329 aa13.9□□□□□ -0.18
TPM1-232ENST00000561425 OR10AG1Q8NH19 301 aa13.9□□□□□ -0.18
TPM1-232ENST00000561425 RYR1P21817 5038 aa13.9□□□□□ -0.18
TPM1-232ENST00000561425 TRBV10-1A0A0K0K1A3 114 aa13.89□□□□□ -0.19
TPM1-232ENST00000561425 C19orf71A6NCJ1 209 aa13.89□□□□□ -0.19
TPM1-232ENST00000561425 CDK2AP2O75956 126 aa13.89□□□□□ -0.19
TPM1-232ENST00000561425 FAM74A4Q5TZK3 123 aa13.89□□□□□ -0.19
TPM1-232ENST00000561425 TRBV20OR9-2A0A075B6H5 130 aa13.88□□□□□ -0.19
TPM1-232ENST00000561425 A0A087WTM6 91 aa13.88□□□□□ -0.19
TPM1-232ENST00000561425 NDUFA5Q16718 116 aa13.88□□□□□ -0.19
TPM1-232ENST00000561425 PRR27Q6MZM9 219 aa13.88□□□□□ -0.19
TPM1-232ENST00000561425 PGPEP1Q9NXJ5 209 aa13.88□□□□□ -0.19
TPM1-232ENST00000561425 OR10G8Q8NGN5 311 aa13.87□□□□□ -0.19
TPM1-232ENST00000561425 HSPG2P98160 4391 aa13.86□□□□□ -0.19
TPM1-232ENST00000561425 A0A087WWC5 75 aa13.86□□□□□ -0.19
TPM1-232ENST00000561425 IGLC6P0CF74 106 aa13.86□□□□□ -0.19
TPM1-232ENST00000561425 ERVFC1-1P60608 527 aa13.86□□□□□ -0.19
TPM1-232ENST00000561425 RAB4BP61018 213 aa13.86□□□□□ -0.19
TPM1-232ENST00000561425 BIN3Q9NQY0 253 aa13.86□□□□□ -0.19
TPM1-232ENST00000561425 KIF25-AS1Q9Y6Z4 181 aa13.86□□□□□ -0.19
TPM1-232ENST00000561425 DNAH5Q8TE73 4624 aa13.86□□□□□ -0.19
TPM1-232ENST00000561425 TMEM218A2RU14 115 aa13.85□□□□□ -0.19
TPM1-232ENST00000561425 TMEM241Q24JQ0 296 aa13.85□□□□□ -0.19
TPM1-232ENST00000561425 KRTAP17-1Q9BYP8 105 aa13.85□□□□□ -0.19
TPM1-232ENST00000561425 NAT8Q9UHE5 227 aa13.85□□□□□ -0.19
TPM1-232ENST00000561425 UBE2D3P61077 147 aa13.84□□□□□ -0.19
TPM1-232ENST00000561425 UBE2D2P62837 147 aa13.84□□□□□ -0.19
TPM1-232ENST00000561425 LAGE3Q14657 143 aa13.84□□□□□ -0.19
TPM1-232ENST00000561425 OCC1Q8TAD7 63 aa13.84□□□□□ -0.19
TPM1-232ENST00000561425 TRBV7-3A0A075B6L6 115 aa13.83□□□□□ -0.2
TPM1-232ENST00000561425 LRCOL1A6NCL2 159 aa13.83□□□□□ -0.2
TPM1-232ENST00000561425 F8W036 122 aa13.83□□□□□ -0.2
TPM1-232ENST00000561425 EREGO14944 169 aa13.83□□□□□ -0.2
TPM1-232ENST00000561425 IGHV3-30P01768 117 aa13.83□□□□□ -0.2
TPM1-232ENST00000561425 IGHV3-33P01772 117 aa13.83□□□□□ -0.2
TPM1-232ENST00000561425 IGHV3-30-3P0DP02 117 aa13.83□□□□□ -0.2
TPM1-232ENST00000561425 IGHV3-30-5P0DP03 117 aa13.83□□□□□ -0.2
TPM1-232ENST00000561425 RPS20P60866 119 aaKnown RBP13.83□□□□□ -0.2
TPM1-232ENST00000561425 CDPF1Q6NVV7 123 aa13.83□□□□□ -0.2
TPM1-232ENST00000561425 SPANXN1Q5VSR9 72 aa13.82□□□□□ -0.2
TPM1-232ENST00000561425 LINC01551Q86U37 167 aa13.82□□□□□ -0.2
TPM1-232ENST00000561425 Q8N3U1 123 aa13.82□□□□□ -0.2
TPM1-232ENST00000561425 OR2D3Q8NGH3 330 aa13.82□□□□□ -0.2
TPM1-232ENST00000561425 DAZAP1Q96EP5 407 aaKnown RBP13.82□□□□□ -0.2
TPM1-232ENST00000561425 MUC21A0A0G2JKD1 596 aa13.81□□□□□ -0.2
TPM1-232ENST00000561425 MUC21A0A140T8X8 626 aa13.81□□□□□ -0.2
TPM1-232ENST00000561425 RPL36AP83881 106 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms