RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 Q6ZSV7 163 aa12.35□□□□□ -0.43
AP4E1-205ENST00000561393 C18orf65Q6ZTR6 163 aa12.35□□□□□ -0.43
AP4E1-205ENST00000561393 SPAG8Q99932 426 aaPredicted RBP12.35□□□□□ -0.43
AP4E1-205ENST00000561393 IGSF10Q6WRI0 2623 aa12.35□□□□□ -0.43
AP4E1-205ENST00000561393 FABP2P12104 132 aa12.35□□□□□ -0.43
AP4E1-205ENST00000561393 MDFICQ9P1T7 246 aa12.35□□□□□ -0.43
AP4E1-205ENST00000561393 ZFAND2AQ8N6M9 145 aa12.34□□□□□ -0.43
AP4E1-205ENST00000561393 C11orf21Q9P2W6 132 aa12.34□□□□□ -0.43
AP4E1-205ENST00000561393 SMIM13P0DJ93 91 aa12.34□□□□□ -0.43
AP4E1-205ENST00000561393 DEFB130BP0DP73 79 aa12.34□□□□□ -0.43
AP4E1-205ENST00000561393 DEFB130AP0DP74 79 aa12.34□□□□□ -0.43
AP4E1-205ENST00000561393 IGHV3-38A0A0C4DH36 116 aa12.34□□□□□ -0.43
AP4E1-205ENST00000561393 PLNP26678 52 aa12.34□□□□□ -0.43
AP4E1-205ENST00000561393 C1QTNF4Q9BXJ3 329 aa12.34□□□□□ -0.43
AP4E1-205ENST00000561393 WDFY3Q8IZQ1 3526 aa12.34□□□□□ -0.43
AP4E1-205ENST00000561393 APOMO95445 188 aa12.33□□□□□ -0.44
AP4E1-205ENST00000561393 RPL36AP83881 106 aaKnown RBP12.33□□□□□ -0.44
AP4E1-205ENST00000561393 ORAOV1Q8WV07 137 aa12.33□□□□□ -0.44
AP4E1-205ENST00000561393 RPL36ALQ969Q0 106 aaKnown RBP12.33□□□□□ -0.44
AP4E1-205ENST00000561393 H3BUT2 72 aa12.33□□□□□ -0.44
AP4E1-205ENST00000561393 K7EQG2 157 aa12.33□□□□□ -0.44
AP4E1-205ENST00000561393 PRR9Q5T870 116 aa12.33□□□□□ -0.44
AP4E1-205ENST00000561393 C4orf3Q8WVX3 66 aa12.33□□□□□ -0.44
AP4E1-205ENST00000561393 C20orf78Q9BR46 151 aa12.33□□□□□ -0.44
AP4E1-205ENST00000561393 FLNCQ14315 2725 aa12.32□□□□□ -0.44
AP4E1-205ENST00000561393 LINC00310P59036 64 aa12.32□□□□□ -0.44
AP4E1-205ENST00000561393 U3KQE9 123 aa12.32□□□□□ -0.44
AP4E1-205ENST00000561393 A8MWV9 139 aa12.32□□□□□ -0.44
AP4E1-205ENST00000561393 MRPS16Q9Y3D3 137 aaKnown RBP12.32□□□□□ -0.44
AP4E1-205ENST00000561393 CFAP47Q6ZTR5 3102 aa12.32□□□□□ -0.44
AP4E1-205ENST00000561393 SFTA2Q6UW10 78 aa12.32□□□□□ -0.44
AP4E1-205ENST00000561393 TMEM101Q96IK0 257 aa12.31□□□□□ -0.44
AP4E1-205ENST00000561393 LINC01549A6NIU2 74 aa12.31□□□□□ -0.44
AP4E1-205ENST00000561393 HSD52Q0P140 79 aa12.31□□□□□ -0.44
AP4E1-205ENST00000561393 PLA2G2AP14555 144 aa12.31□□□□□ -0.44
AP4E1-205ENST00000561393 AZU1P20160 251 aa12.31□□□□□ -0.44
AP4E1-205ENST00000561393 COL12A1Q99715 3063 aa12.31□□□□□ -0.44
AP4E1-205ENST00000561393 GAGE12BA1L429 117 aa12.3□□□□□ -0.44
AP4E1-205ENST00000561393 GAGE7O76087 117 aa12.3□□□□□ -0.44
AP4E1-205ENST00000561393 GAGE12FP0CL80 117 aa12.3□□□□□ -0.44
AP4E1-205ENST00000561393 GAGE12GP0CL81 117 aa12.3□□□□□ -0.44
AP4E1-205ENST00000561393 GAGE12IP0CL82 117 aa12.3□□□□□ -0.44
AP4E1-205ENST00000561393 SUMO4Q6EEV6 95 aa12.3□□□□□ -0.44
AP4E1-205ENST00000561393 TMEM86BQ8N661 226 aa12.3□□□□□ -0.44
AP4E1-205ENST00000561393 PSMG3-AS1Q96PY0 264 aa12.3□□□□□ -0.44
AP4E1-205ENST00000561393 RHODO00212 210 aa12.3□□□□□ -0.44
AP4E1-205ENST00000561393 SRSF2Q01130 221 aaKnown RBP12.29□□□□□ -0.44
AP4E1-205ENST00000561393 MEIG1Q5JSS6 88 aa12.29□□□□□ -0.44
AP4E1-205ENST00000561393 CHCHD5Q9BSY4 110 aa12.29□□□□□ -0.44
AP4E1-205ENST00000561393 TOMM7Q9P0U1 55 aa12.29□□□□□ -0.44
AP4E1-205ENST00000561393 FLNAP21333 2647 aaKnown RBP12.29□□□□□ -0.44
AP4E1-205ENST00000561393 CRIP2P52943 208 aaPredicted RBP12.29□□□□□ -0.44
AP4E1-205ENST00000561393 GAGE12JA6NER3 117 aa12.29□□□□□ -0.44
AP4E1-205ENST00000561393 CD5LO43866 347 aa12.29□□□□□ -0.44
AP4E1-205ENST00000561393 GAGE1Q13065 139 aa12.29□□□□□ -0.44
AP4E1-205ENST00000561393 GAGE4Q13068 117 aa12.29□□□□□ -0.44
AP4E1-205ENST00000561393 GAGE5Q13069 117 aa12.29□□□□□ -0.44
AP4E1-205ENST00000561393 GAGE13Q4V321 117 aa12.29□□□□□ -0.44
AP4E1-205ENST00000561393 ANKRD39Q53RE8 183 aa12.29□□□□□ -0.44
AP4E1-205ENST00000561393 I3L3M4 83 aa12.28□□□□□ -0.44
AP4E1-205ENST00000561393 M0R2P5 195 aa12.28□□□□□ -0.44
AP4E1-205ENST00000561393 COX8AP10176 69 aa12.28□□□□□ -0.44
AP4E1-205ENST00000561393 LINC01545Q5VT33 79 aa12.28□□□□□ -0.44
AP4E1-205ENST00000561393 ZNRF2Q8NHG8 242 aa12.28□□□□□ -0.44
AP4E1-205ENST00000561393 F8VRH5 84 aa12.28□□□□□ -0.44
AP4E1-205ENST00000561393 A0A0U1RRA0 63 aa12.27□□□□□ -0.44
AP4E1-205ENST00000561393 LGALS9O00182 355 aa12.27□□□□□ -0.44
AP4E1-205ENST00000561393 LYRM7Q5U5X0 104 aa12.27□□□□□ -0.44
AP4E1-205ENST00000561393 ADAMTSL5Q6ZMM2 481 aa12.27□□□□□ -0.44
AP4E1-205ENST00000561393 PCP2Q8IVA1 136 aa12.27□□□□□ -0.45
AP4E1-205ENST00000561393 GATD1Q8NB37 220 aa12.27□□□□□ -0.45
AP4E1-205ENST00000561393 AGRNO00468 2067 aa12.27□□□□□ -0.45
AP4E1-205ENST00000561393 GAS8-AS1O95177 125 aa12.27□□□□□ -0.45
AP4E1-205ENST00000561393 SEC11AP67812 179 aa12.27□□□□□ -0.45
AP4E1-205ENST00000561393 SPXQ9BT56 116 aa12.26□□□□□ -0.45
AP4E1-205ENST00000561393 MAP6D1Q9H9H5 199 aa12.26□□□□□ -0.45
AP4E1-205ENST00000561393 J3QR89 54 aa12.26□□□□□ -0.45
AP4E1-205ENST00000561393 RNASE13Q5GAN3 156 aaKnown RBP12.26□□□□□ -0.45
AP4E1-205ENST00000561393 PRSS29PA6NIE9 313 aa12.26□□□□□ -0.45
AP4E1-205ENST00000561393 PMVKQ15126 192 aa12.26□□□□□ -0.45
AP4E1-205ENST00000561393 NOP10Q9NPE3 64 aaKnown RBP12.26□□□□□ -0.45
AP4E1-205ENST00000561393 SMR3AQ99954 134 aa12.25□□□□□ -0.45
AP4E1-205ENST00000561393 CHAC1Q9BUX1 264 aa12.25□□□□□ -0.45
AP4E1-205ENST00000561393 TTTY13Q9BZ97 58 aa12.25□□□□□ -0.45
AP4E1-205ENST00000561393 ITPR3Q14573 2671 aa12.25□□□□□ -0.45
AP4E1-205ENST00000561393 TRBV7-9A0A0J9YWB2 115 aa12.25□□□□□ -0.45
AP4E1-205ENST00000561393 H3BRM9 83 aa12.25□□□□□ -0.45
AP4E1-205ENST00000561393 DCANP1Q8TF63 244 aa12.25□□□□□ -0.45
AP4E1-205ENST00000561393 HELZ2Q9BYK8 2649 aaKnown RBP12.25□□□□□ -0.45
AP4E1-205ENST00000561393 LRBAP50851 2863 aa12.25□□□□□ -0.45
AP4E1-205ENST00000561393 TRAV13-1A0A0B4J241 112 aa12.25□□□□□ -0.45
AP4E1-205ENST00000561393 CIRBPQ14011 172 aaKnown RBP12.25□□□□□ -0.45
AP4E1-205ENST00000561393 DEFB114Q30KQ6 69 aa12.25□□□□□ -0.45
AP4E1-205ENST00000561393 TRAV2A0A0B4J234 112 aa12.24□□□□□ -0.45
AP4E1-205ENST00000561393 HLA-DRB4P13762 266 aa12.24□□□□□ -0.45
AP4E1-205ENST00000561393 Q6ZVH6 145 aa12.24□□□□□ -0.45
AP4E1-205ENST00000561393 SPCS1Q9Y6A9 102 aa12.24□□□□□ -0.45
AP4E1-205ENST00000561393 HLA-DRB4X5D2U9 266 aa12.24□□□□□ -0.45
AP4E1-205ENST00000561393 ADARB2-AS1A8MUL3 147 aa12.24□□□□□ -0.45
AP4E1-205ENST00000561393 RNF185Q96GF1 192 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms