RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 MED28Q9H204 178 aa7.7□□□□□ -1.18
USP3-220ENST00000561381 RNF222A6NCQ9 220 aa7.69□□□□□ -1.18
USP3-220ENST00000561381 FABP5P3A8MUU1 101 aa7.69□□□□□ -1.18
USP3-220ENST00000561381 H3BVH4 76 aa7.69□□□□□ -1.18
USP3-220ENST00000561381 PEX7O00628 323 aa7.69□□□□□ -1.18
USP3-220ENST00000561381 IFNA7P01567 189 aa7.69□□□□□ -1.18
USP3-220ENST00000561381 CRIP1P50238 77 aa7.69□□□□□ -1.18
USP3-220ENST00000561381 FGF8P55075 233 aaPredicted RBP7.69□□□□□ -1.18
USP3-220ENST00000561381 Q86TA4 180 aa7.69□□□□□ -1.18
USP3-220ENST00000561381 DNAJC30Q96LL9 226 aa7.69□□□□□ -1.18
USP3-220ENST00000561381 TM2D2Q9BX73 214 aa7.69□□□□□ -1.18
USP3-220ENST00000561381 SRRM2Q9UQ35 2752 aaKnown RBP7.68□□□□□ -1.18
USP3-220ENST00000561381 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.68□□□□□ -1.18
USP3-220ENST00000561381 GRIFINA4D1Z8 144 aa7.68□□□□□ -1.18
USP3-220ENST00000561381 B4DEV8 164 aa7.68□□□□□ -1.18
USP3-220ENST00000561381 M0R036 132 aa7.68□□□□□ -1.18
USP3-220ENST00000561381 LINC01620Q4KN68 170 aa7.68□□□□□ -1.18
USP3-220ENST00000561381 PIK3CD-AS1Q5SR53 167 aa7.68□□□□□ -1.18
USP3-220ENST00000561381 BAALCQ8WXS3 180 aa7.68□□□□□ -1.18
USP3-220ENST00000561381 ZC2HC1AQ96GY0 325 aa7.68□□□□□ -1.18
USP3-220ENST00000561381 IL36BQ9NZH7 164 aa7.68□□□□□ -1.18
USP3-220ENST00000561381 A0A087WWL8 130 aa7.67□□□□□ -1.18
USP3-220ENST00000561381 FXYD6-FXYD2A0A087WZ82 144 aa7.67□□□□□ -1.18
USP3-220ENST00000561381 TRAV8-3A0A0A6YYJ7 113 aa7.67□□□□□ -1.18
USP3-220ENST00000561381 CTXND1A0A1B0GTU2 59 aa7.67□□□□□ -1.18
USP3-220ENST00000561381 FAM74A7A6NL05 159 aa7.67□□□□□ -1.18
USP3-220ENST00000561381 KRBOX1C9JBD0 128 aa7.67□□□□□ -1.18
USP3-220ENST00000561381 GIPP09681 153 aaPredicted RBP7.67□□□□□ -1.18
USP3-220ENST00000561381 ARMS2P0C7Q2 107 aa7.67□□□□□ -1.18
USP3-220ENST00000561381 Q6ZSA8 131 aa7.67□□□□□ -1.18
USP3-220ENST00000561381 INO80EQ8NBZ0 244 aaPredicted RBP7.67□□□□□ -1.18
USP3-220ENST00000561381 BORCS7-ASMTA0A0B4J1R7 106 aa7.66□□□□□ -1.18
USP3-220ENST00000561381 SH2D1AO60880 128 aa7.66□□□□□ -1.18
USP3-220ENST00000561381 PTTG1O95997 202 aa7.66□□□□□ -1.18
USP3-220ENST00000561381 C1QBP02746 253 aa7.66□□□□□ -1.18
USP3-220ENST00000561381 FAM74A4Q5TZK3 123 aa7.66□□□□□ -1.18
USP3-220ENST00000561381 A0A087WWC5 75 aa7.65□□□□□ -1.18
USP3-220ENST00000561381 TMSB15BA0A087X1C1 80 aa7.65□□□□□ -1.18
USP3-220ENST00000561381 RHODO00212 210 aa7.65□□□□□ -1.18
USP3-220ENST00000561381 DNLZQ5SXM8 178 aa7.65□□□□□ -1.18
USP3-220ENST00000561381 NIT1Q86X76 327 aa7.65□□□□□ -1.18
USP3-220ENST00000561381 SYT8Q8NBV8 401 aa7.65□□□□□ -1.18
USP3-220ENST00000561381 OR11H4Q8NGC9 324 aa7.65□□□□□ -1.18
USP3-220ENST00000561381 HIST1H2BAQ96A08 127 aa7.65□□□□□ -1.18
USP3-220ENST00000561381 KLK12Q9UKR0 248 aa7.65□□□□□ -1.18
USP3-220ENST00000561381 G3V3Q6 166 aa7.64□□□□□ -1.19
USP3-220ENST00000561381 M0R381 172 aa7.64□□□□□ -1.19
USP3-220ENST00000561381 TOR2AQ5JU69 321 aa7.64□□□□□ -1.19
USP3-220ENST00000561381 AKR1C8PQ5T2L2 129 aa7.64□□□□□ -1.19
USP3-220ENST00000561381 FAM162BQ5T6X4 162 aa7.64□□□□□ -1.19
USP3-220ENST00000561381 COX8CQ7Z4L0 72 aa7.64□□□□□ -1.19
USP3-220ENST00000561381 SFRP2Q96HF1 295 aa7.64□□□□□ -1.19
USP3-220ENST00000561381 ZFP30Q9Y2G7 519 aa7.64□□□□□ -1.19
USP3-220ENST00000561381 IGKV2D-24A0A075B6R9 120 aa7.63□□□□□ -1.19
USP3-220ENST00000561381 MAP1LC3B2A6NCE7 125 aa7.63□□□□□ -1.19
USP3-220ENST00000561381 ZNF674Q2M3X9 581 aa7.63□□□□□ -1.19
USP3-220ENST00000561381 UBE2WQ96B02 151 aa7.63□□□□□ -1.19
USP3-220ENST00000561381 FMC1Q96HJ9 113 aa7.63□□□□□ -1.19
USP3-220ENST00000561381 NKX6-2Q9C056 277 aaPredicted RBP7.63□□□□□ -1.19
USP3-220ENST00000561381 MAP1LC3BQ9GZQ8 125 aa7.63□□□□□ -1.19
USP3-220ENST00000561381 CYTL1Q9NRR1 136 aa7.63□□□□□ -1.19
USP3-220ENST00000561381 PHLDA3Q9Y5J5 127 aa7.63□□□□□ -1.19
USP3-220ENST00000561381 URGCP-MRPS24S4R325 110 aa7.63□□□□□ -1.19
USP3-220ENST00000561381 RBFOX3A6NFN3 312 aa7.62□□□□□ -1.19
USP3-220ENST00000561381 LTAP01374 205 aa7.62□□□□□ -1.19
USP3-220ENST00000561381 PLA2G1BP04054 148 aaKnown RBP7.62□□□□□ -1.19
USP3-220ENST00000561381 TPT1P13693 172 aaKnown RBP7.62□□□□□ -1.19
USP3-220ENST00000561381 FHITP49789 147 aa7.62□□□□□ -1.19
USP3-220ENST00000561381 UBE2G1P62253 170 aa7.62□□□□□ -1.19
USP3-220ENST00000561381 CST9LP1Q5W188 147 aa7.62□□□□□ -1.19
USP3-220ENST00000561381 SCXQ7RTU7 201 aa7.62□□□□□ -1.19
USP3-220ENST00000561381 ARPC5O15511 151 aa7.61□□□□□ -1.19
USP3-220ENST00000561381 UBE2D3P61077 147 aa7.61□□□□□ -1.19
USP3-220ENST00000561381 UBE2D2P62837 147 aa7.61□□□□□ -1.19
USP3-220ENST00000561381 ZFP82Q8N141 532 aa7.61□□□□□ -1.19
USP3-220ENST00000561381 RMI2Q96E14 147 aa7.61□□□□□ -1.19
USP3-220ENST00000561381 COX11Q9Y6N1 276 aa7.61□□□□□ -1.19
USP3-220ENST00000561381 A0A087WX48 190 aa7.6□□□□□ -1.19
USP3-220ENST00000561381 TRBV6-1A0A0K0K1D8 114 aa7.6□□□□□ -1.19
USP3-220ENST00000561381 AKR1C3P42330 323 aa7.6□□□□□ -1.19
USP3-220ENST00000561381 RPL36AP83881 106 aaKnown RBP7.6□□□□□ -1.19
USP3-220ENST00000561381 RPL19P84098 196 aaKnown RBP7.6□□□□□ -1.19
USP3-220ENST00000561381 Q8N976 141 aa7.6□□□□□ -1.19
USP3-220ENST00000561381 RPL36ALQ969Q0 106 aaKnown RBP7.6□□□□□ -1.19
USP3-220ENST00000561381 BATF3Q9NR55 127 aa7.6□□□□□ -1.19
USP3-220ENST00000561381 TRBV7-3A0A075B6L6 115 aa7.59□□□□□ -1.19
USP3-220ENST00000561381 TRBV10-1A0A0K0K1A3 114 aa7.59□□□□□ -1.19
USP3-220ENST00000561381 KRTAP29-1A8MX34 341 aaPredicted RBP7.59□□□□□ -1.19
USP3-220ENST00000561381 SMLR1H3BR10 107 aa7.59□□□□□ -1.19
USP3-220ENST00000561381 PAGE4O60829 102 aa7.59□□□□□ -1.19
USP3-220ENST00000561381 ATRAIDQ6UW56 229 aa7.59□□□□□ -1.19
USP3-220ENST00000561381 OR10AG1Q8NH19 301 aa7.59□□□□□ -1.19
USP3-220ENST00000561381 MUC21A0A0G2JKD1 596 aa7.58□□□□□ -1.2
USP3-220ENST00000561381 MUC21A0A140T8X8 626 aa7.58□□□□□ -1.2
USP3-220ENST00000561381 A0A1B0GV50 99 aa7.58□□□□□ -1.2
USP3-220ENST00000561381 TMEM262E9PQX1 116 aa7.58□□□□□ -1.2
USP3-220ENST00000561381 SEC11BP0C7V7 166 aa7.58□□□□□ -1.2
USP3-220ENST00000561381 KRTAP10-4P60372 401 aaPredicted RBP7.58□□□□□ -1.2
USP3-220ENST00000561381 ENHOQ6UWT2 76 aa7.58□□□□□ -1.2
USP3-220ENST00000561381 NEXN-AS1Q8NBZ9 246 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms