RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 ZFP82Q8N141 532 aa9.49□□□□□ -0.89
TPM1-230ENST00000561266 SYT8Q8NBV8 401 aa9.49□□□□□ -0.89
TPM1-230ENST00000561266 SMIM12Q96EX1 92 aa9.49□□□□□ -0.89
TPM1-230ENST00000561266 EIF5A2Q9GZV4 153 aaKnown RBP9.49□□□□□ -0.89
TPM1-230ENST00000561266 MSRB1Q9NZV6 116 aa9.49□□□□□ -0.89
TPM1-230ENST00000561266 HECTD4Q9Y4D8 3996 aa9.49□□□□□ -0.89
TPM1-230ENST00000561266 CIDEAO60543 219 aa9.48□□□□□ -0.89
TPM1-230ENST00000561266 CEBPGP53567 150 aa9.48□□□□□ -0.89
TPM1-230ENST00000561266 RHOHQ15669 191 aa9.48□□□□□ -0.89
TPM1-230ENST00000561266 BIRC6Q9NR09 4857 aa9.47□□□□□ -0.89
TPM1-230ENST00000561266 PKD1P98161 4303 aa9.47□□□□□ -0.89
TPM1-230ENST00000561266 A0A1B0GVY2 172 aa9.47□□□□□ -0.89
TPM1-230ENST00000561266 P01737 135 aa9.47□□□□□ -0.89
TPM1-230ENST00000561266 LINC00315P59091 139 aa9.47□□□□□ -0.89
TPM1-230ENST00000561266 DAZAP1Q96EP5 407 aaKnown RBP9.47□□□□□ -0.89
TPM1-230ENST00000561266 PRADC1Q9BSG0 188 aa9.47□□□□□ -0.89
TPM1-230ENST00000561266 TNFRSF18Q9Y5U5 241 aa9.47□□□□□ -0.89
TPM1-230ENST00000561266 KIF25-AS1Q9Y6Z4 181 aa9.47□□□□□ -0.89
TPM1-230ENST00000561266 GAGE12JA6NER3 117 aa9.46□□□□□ -0.9
TPM1-230ENST00000561266 SIVA1O15304 175 aa9.46□□□□□ -0.9
TPM1-230ENST00000561266 GAGE1Q13065 139 aa9.46□□□□□ -0.9
TPM1-230ENST00000561266 GAGE4Q13068 117 aa9.46□□□□□ -0.9
TPM1-230ENST00000561266 GAGE5Q13069 117 aa9.46□□□□□ -0.9
TPM1-230ENST00000561266 GAGE13Q4V321 117 aa9.46□□□□□ -0.9
TPM1-230ENST00000561266 C1orf134Q5TEV5 83 aa9.46□□□□□ -0.9
TPM1-230ENST00000561266 FER1L6-AS1Q8NA97 138 aa9.46□□□□□ -0.9
TPM1-230ENST00000561266 LYZL1Q6UWQ5 148 aa9.45□□□□□ -0.9
TPM1-230ENST00000561266 TPPP3Q9BW30 176 aa9.45□□□□□ -0.9
TPM1-230ENST00000561266 PRSS29PA6NIE9 313 aa9.44□□□□□ -0.9
TPM1-230ENST00000561266 RHODO00212 210 aa9.44□□□□□ -0.9
TPM1-230ENST00000561266 NDUFS6O75380 124 aaKnown RBP9.44□□□□□ -0.9
TPM1-230ENST00000561266 RPS20P60866 119 aaKnown RBP9.44□□□□□ -0.9
TPM1-230ENST00000561266 TNP2Q05952 138 aa9.44□□□□□ -0.9
TPM1-230ENST00000561266 SPANXN1Q5VSR9 72 aa9.44□□□□□ -0.9
TPM1-230ENST00000561266 C6orf223Q8N319 242 aa9.44□□□□□ -0.9
TPM1-230ENST00000561266 ATP6V0E2Q8NHE4 81 aa9.44□□□□□ -0.9
TPM1-230ENST00000561266 GTSF1Q8WW33 167 aa9.44□□□□□ -0.9
TPM1-230ENST00000561266 DNAH11Q96DT5 4516 aa9.43□□□□□ -0.9
TPM1-230ENST00000561266 PKHD1P08F94 4074 aa9.43□□□□□ -0.9
TPM1-230ENST00000561266 TIRAPP58753 221 aa9.43□□□□□ -0.9
TPM1-230ENST00000561266 LINC00336Q6ZUF6 198 aa9.43□□□□□ -0.9
TPM1-230ENST00000561266 LINC01551Q86U37 167 aa9.43□□□□□ -0.9
TPM1-230ENST00000561266 Q8N3U1 123 aa9.43□□□□□ -0.9
TPM1-230ENST00000561266 SMIM7Q9BQ49 75 aa9.43□□□□□ -0.9
TPM1-230ENST00000561266 RPP21Q9H633 154 aaKnown RBP9.43□□□□□ -0.9
TPM1-230ENST00000561266 ZNF727A8MUV8 499 aa9.42□□□□□ -0.9
TPM1-230ENST00000561266 IFITM2Q01629 132 aa9.42□□□□□ -0.9
TPM1-230ENST00000561266 GTSF1LQ9H1H1 148 aa9.42□□□□□ -0.9
TPM1-230ENST00000561266 BIN3Q9NQY0 253 aa9.42□□□□□ -0.9
TPM1-230ENST00000561266 LY96Q9Y6Y9 160 aa9.42□□□□□ -0.9
TPM1-230ENST00000561266 NTF3P20783 257 aa9.41□□□□□ -0.9
TPM1-230ENST00000561266 EVI2AP22794 236 aa9.41□□□□□ -0.9
TPM1-230ENST00000561266 CTRLP40313 264 aa9.41□□□□□ -0.9
TPM1-230ENST00000561266 Q6ZRN7 208 aaPredicted RBP9.41□□□□□ -0.9
TPM1-230ENST00000561266 FAM231DQ6ZW35 169 aa9.41□□□□□ -0.9
TPM1-230ENST00000561266 SH2D6Q7Z4S9 175 aa9.41□□□□□ -0.9
TPM1-230ENST00000561266 NEXN-AS1Q8NBZ9 246 aa9.41□□□□□ -0.9
TPM1-230ENST00000561266 A0A1W2PPQ1 181 aa9.4□□□□□ -0.9
TPM1-230ENST00000561266 GATCO43716 136 aaKnown RBP9.4□□□□□ -0.9
TPM1-230ENST00000561266 DNAH10OSP0CZ25 163 aa9.4□□□□□ -0.9
TPM1-230ENST00000561266 FOXA3P55318 350 aaPredicted RBP9.4□□□□□ -0.9
TPM1-230ENST00000561266 RAB4BP61018 213 aa9.4□□□□□ -0.9
TPM1-230ENST00000561266 ZNF56Q15929 161 aa9.4□□□□□ -0.9
TPM1-230ENST00000561266 TTC32Q5I0X7 151 aa9.4□□□□□ -0.9
TPM1-230ENST00000561266 LELP1Q5T871 98 aa9.4□□□□□ -0.9
TPM1-230ENST00000561266 UBE2D3P61077 147 aa9.39□□□□□ -0.91
TPM1-230ENST00000561266 RPL23P62829 140 aaKnown RBP9.39□□□□□ -0.91
TPM1-230ENST00000561266 UBE2D2P62837 147 aa9.39□□□□□ -0.91
TPM1-230ENST00000561266 CACNG7P62955 275 aa9.39□□□□□ -0.91
TPM1-230ENST00000561266 CNFNQ9BYD5 112 aa9.39□□□□□ -0.91
TPM1-230ENST00000561266 IGHV3-38A0A0C4DH36 116 aa9.38□□□□□ -0.91
TPM1-230ENST00000561266 XKRY2A2RUG3 117 aa9.38□□□□□ -0.91
TPM1-230ENST00000561266 F2Z2F3 143 aa9.38□□□□□ -0.91
TPM1-230ENST00000561266 F5H697 171 aa9.38□□□□□ -0.91
TPM1-230ENST00000561266 ERVFC1-1P60608 527 aa9.38□□□□□ -0.91
TPM1-230ENST00000561266 OR10J3Q5JRS4 329 aa9.38□□□□□ -0.91
TPM1-230ENST00000561266 OR10G8Q8NGN5 311 aa9.38□□□□□ -0.91
TPM1-230ENST00000561266 AP1S3Q96PC3 154 aa9.38□□□□□ -0.91
TPM1-230ENST00000561266 DYNC1H1Q14204 4646 aaKnown RBP9.38□□□□□ -0.91
TPM1-230ENST00000561266 TRBV10-1A0A0K0K1A3 114 aa9.37□□□□□ -0.91
TPM1-230ENST00000561266 M0QY20 66 aa9.37□□□□□ -0.91
TPM1-230ENST00000561266 IGHV3-30P01768 117 aa9.37□□□□□ -0.91
TPM1-230ENST00000561266 IGHV3-33P01772 117 aa9.37□□□□□ -0.91
TPM1-230ENST00000561266 MGPP08493 103 aa9.37□□□□□ -0.91
TPM1-230ENST00000561266 IGHV3-30-3P0DP02 117 aa9.37□□□□□ -0.91
TPM1-230ENST00000561266 IGHV3-30-5P0DP03 117 aa9.37□□□□□ -0.91
TPM1-230ENST00000561266 PEA15Q15121 130 aa9.37□□□□□ -0.91
TPM1-230ENST00000561266 TMEM241Q24JQ0 296 aa9.37□□□□□ -0.91
TPM1-230ENST00000561266 SOHLH1Q5JUK2 328 aa9.37□□□□□ -0.91
TPM1-230ENST00000561266 SUMO4Q6EEV6 95 aa9.37□□□□□ -0.91
TPM1-230ENST00000561266 WDR73Q6P4I2 378 aa9.37□□□□□ -0.91
TPM1-230ENST00000561266 ISOC2Q96AB3 205 aa9.37□□□□□ -0.91
TPM1-230ENST00000561266 PGLYRP4Q96LB8 373 aa9.37□□□□□ -0.91
TPM1-230ENST00000561266 OSTCQ9NRP0 149 aa9.37□□□□□ -0.91
TPM1-230ENST00000561266 V9GYV3 84 aa9.37□□□□□ -0.91
TPM1-230ENST00000561266 TRBV7-3A0A075B6L6 115 aa9.36□□□□□ -0.91
TPM1-230ENST00000561266 LINC01556Q5JQF7 62 aa9.36□□□□□ -0.91
TPM1-230ENST00000561266 TRAV8-6A0A0B4J262 113 aa9.35□□□□□ -0.91
TPM1-230ENST00000561266 A8MWL6 223 aa9.35□□□□□ -0.91
TPM1-230ENST00000561266 RPL36AP83881 106 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms